RNA–Protein interactions for RNA: ENST00000517483.5

TMPRSS4-202, Transcript of transmembrane serine protease 4, humanhuman

TSL 2

Gene TMPRSS4, Length 2,074 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-202ENST00000517483 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
TMPRSS4-202ENST00000517483 CCDC180Q9P1Z9 1646 aa26.42■■□□□ 1.82
TMPRSS4-202ENST00000517483 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
TMPRSS4-202ENST00000517483 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
TMPRSS4-202ENST00000517483 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
TMPRSS4-202ENST00000517483 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
TMPRSS4-202ENST00000517483 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.56
TMPRSS4-202ENST00000517483 ABCC9O60706 1549 aa24.68■■□□□ 1.54
TMPRSS4-202ENST00000517483 NACADO15069 1562 aa24.58■■□□□ 1.53
TMPRSS4-202ENST00000517483 HRCP23327 699 aa24.31■■□□□ 1.48
TMPRSS4-202ENST00000517483 RB1CC1Q8TDY2 1594 aa24.27■■□□□ 1.48
TMPRSS4-202ENST00000517483 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
TMPRSS4-202ENST00000517483 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.47
TMPRSS4-202ENST00000517483 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
TMPRSS4-202ENST00000517483 PCGF6Q9BYE7 350 aa23.77■■□□□ 1.4
TMPRSS4-202ENST00000517483 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
TMPRSS4-202ENST00000517483 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
TMPRSS4-202ENST00000517483 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
TMPRSS4-202ENST00000517483 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
TMPRSS4-202ENST00000517483 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
TMPRSS4-202ENST00000517483 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
TMPRSS4-202ENST00000517483 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
TMPRSS4-202ENST00000517483 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
TMPRSS4-202ENST00000517483 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
TMPRSS4-202ENST00000517483 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
TMPRSS4-202ENST00000517483 WIZO95785 1651 aa23.26■■□□□ 1.31
TMPRSS4-202ENST00000517483 PELP1Q8IZL8 1130 aaKnown RBP23.2■■□□□ 1.3
TMPRSS4-202ENST00000517483 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
TMPRSS4-202ENST00000517483 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
TMPRSS4-202ENST00000517483 PEG3Q9GZU2 1588 aa23.09■■□□□ 1.29
TMPRSS4-202ENST00000517483 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.28
TMPRSS4-202ENST00000517483 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
TMPRSS4-202ENST00000517483 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.26
TMPRSS4-202ENST00000517483 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
TMPRSS4-202ENST00000517483 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
TMPRSS4-202ENST00000517483 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
TMPRSS4-202ENST00000517483 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
TMPRSS4-202ENST00000517483 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
TMPRSS4-202ENST00000517483 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
TMPRSS4-202ENST00000517483 HMGXB3Q12766 1538 aa22.66■■□□□ 1.22
TMPRSS4-202ENST00000517483 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
TMPRSS4-202ENST00000517483 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
TMPRSS4-202ENST00000517483 ACIN1Q9UKV3 1341 aaKnown RBP22.36■■□□□ 1.17
TMPRSS4-202ENST00000517483 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
TMPRSS4-202ENST00000517483 MYT1Q01538 1121 aa22.28■■□□□ 1.16
TMPRSS4-202ENST00000517483 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
TMPRSS4-202ENST00000517483 CFTRP13569 1480 aa22.24■■□□□ 1.15
TMPRSS4-202ENST00000517483 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
TMPRSS4-202ENST00000517483 EEA1Q15075 1411 aa22.15■■□□□ 1.14
TMPRSS4-202ENST00000517483 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
TMPRSS4-202ENST00000517483 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
TMPRSS4-202ENST00000517483 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
TMPRSS4-202ENST00000517483 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
TMPRSS4-202ENST00000517483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
TMPRSS4-202ENST00000517483 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
TMPRSS4-202ENST00000517483 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.12
TMPRSS4-202ENST00000517483 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
TMPRSS4-202ENST00000517483 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
TMPRSS4-202ENST00000517483 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
TMPRSS4-202ENST00000517483 SOGA1O94964 1423 aa22.04■■□□□ 1.12
TMPRSS4-202ENST00000517483 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.11
TMPRSS4-202ENST00000517483 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
TMPRSS4-202ENST00000517483 CUX1P39880 1505 aa21.93■■□□□ 1.1
TMPRSS4-202ENST00000517483 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
TMPRSS4-202ENST00000517483 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
TMPRSS4-202ENST00000517483 FANCD2Q9BXW9 1451 aa21.82■■□□□ 1.08
TMPRSS4-202ENST00000517483 TNIKQ9UKE5 1360 aa21.81■■□□□ 1.08
TMPRSS4-202ENST00000517483 KIF21BO75037 1637 aa21.79■■□□□ 1.08
TMPRSS4-202ENST00000517483 GOLGA3Q08378 1498 aa21.78■■□□□ 1.08
TMPRSS4-202ENST00000517483 CEP164Q9UPV0 1460 aa21.78■■□□□ 1.08
TMPRSS4-202ENST00000517483 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
TMPRSS4-202ENST00000517483 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
TMPRSS4-202ENST00000517483 NESP48681 1621 aa21.74■■□□□ 1.07
TMPRSS4-202ENST00000517483 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
TMPRSS4-202ENST00000517483 DNAJC5BQ9UF47 199 aa21.7■■□□□ 1.06
TMPRSS4-202ENST00000517483 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
TMPRSS4-202ENST00000517483 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
TMPRSS4-202ENST00000517483 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
TMPRSS4-202ENST00000517483 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.05
TMPRSS4-202ENST00000517483 PRXQ9BXM0 1461 aa21.64■■□□□ 1.05
TMPRSS4-202ENST00000517483 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
TMPRSS4-202ENST00000517483 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
TMPRSS4-202ENST00000517483 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
TMPRSS4-202ENST00000517483 CUX2O14529 1486 aa21.55■■□□□ 1.04
TMPRSS4-202ENST00000517483 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
TMPRSS4-202ENST00000517483 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
TMPRSS4-202ENST00000517483 ABCA10Q8WWZ4 1543 aa21.52■■□□□ 1.04
TMPRSS4-202ENST00000517483 IGF1RP08069 1367 aa21.51■■□□□ 1.03
TMPRSS4-202ENST00000517483 MIER1Q8N108 512 aa21.5■■□□□ 1.03
TMPRSS4-202ENST00000517483 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
TMPRSS4-202ENST00000517483 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
TMPRSS4-202ENST00000517483 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
TMPRSS4-202ENST00000517483 CLIP1P30622 1438 aa21.43■■□□□ 1.02
TMPRSS4-202ENST00000517483 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
TMPRSS4-202ENST00000517483 CARMIL1Q5VZK9 1371 aa21.39■■□□□ 1.01
TMPRSS4-202ENST00000517483 CLSPNQ9HAW4 1339 aa21.39■■□□□ 1.01
TMPRSS4-202ENST00000517483 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
TMPRSS4-202ENST00000517483 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
TMPRSS4-202ENST00000517483 VPS8Q8N3P4 1428 aa21.3■■□□□ 1
TMPRSS4-202ENST00000517483 CUL7Q14999 1698 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms