RNA–Protein interactions for RNA: ENST00000515404.5

MRPS27-207, Transcript of mitochondrial ribosomal protein S27, humanhuman

TSL 1 (best) BASIC

Gene MRPS27, Length 1,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS27-207ENST00000515404 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
MRPS27-207ENST00000515404 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
MRPS27-207ENST00000515404 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
MRPS27-207ENST00000515404 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
MRPS27-207ENST00000515404 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
MRPS27-207ENST00000515404 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
MRPS27-207ENST00000515404 FOXD1Q16676 465 aa19.3■□□□□ 0.68
MRPS27-207ENST00000515404 ADRA2BP18089 450 aa18.55■□□□□ 0.56
MRPS27-207ENST00000515404 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
MRPS27-207ENST00000515404 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
MRPS27-207ENST00000515404 MSH5O43196 834 aa17.87■□□□□ 0.45
MRPS27-207ENST00000515404 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
MRPS27-207ENST00000515404 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
MRPS27-207ENST00000515404 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
MRPS27-207ENST00000515404 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
MRPS27-207ENST00000515404 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
MRPS27-207ENST00000515404 KCNA4P22459 653 aa16.6■□□□□ 0.25
MRPS27-207ENST00000515404 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
MRPS27-207ENST00000515404 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
MRPS27-207ENST00000515404 DMRT2Q9Y5R5 561 aa16.57■□□□□ 0.24
MRPS27-207ENST00000515404 ABCC9O60706 1549 aa16.5■□□□□ 0.23
MRPS27-207ENST00000515404 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
MRPS27-207ENST00000515404 DCAF1Q9Y4B6 1507 aa16.49■□□□□ 0.23
MRPS27-207ENST00000515404 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
MRPS27-207ENST00000515404 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
MRPS27-207ENST00000515404 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
MRPS27-207ENST00000515404 NACADO15069 1562 aa16.29■□□□□ 0.2
MRPS27-207ENST00000515404 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
MRPS27-207ENST00000515404 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
MRPS27-207ENST00000515404 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
MRPS27-207ENST00000515404 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
MRPS27-207ENST00000515404 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
MRPS27-207ENST00000515404 SLC4A1APQ9BWU0 796 aaKnown RBP15.85■□□□□ 0.13
MRPS27-207ENST00000515404 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
MRPS27-207ENST00000515404 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
MRPS27-207ENST00000515404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
MRPS27-207ENST00000515404 UNC13AQ9UPW8 1703 aa15.58■□□□□ 0.08
MRPS27-207ENST00000515404 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
MRPS27-207ENST00000515404 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
MRPS27-207ENST00000515404 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
MRPS27-207ENST00000515404 DNAJC5Q9H3Z4 198 aa15.44■□□□□ 0.06
MRPS27-207ENST00000515404 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
MRPS27-207ENST00000515404 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
MRPS27-207ENST00000515404 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
MRPS27-207ENST00000515404 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
MRPS27-207ENST00000515404 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.04
MRPS27-207ENST00000515404 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
MRPS27-207ENST00000515404 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
MRPS27-207ENST00000515404 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
MRPS27-207ENST00000515404 ZBTB22O15209 634 aa15.22■□□□□ 0.03
MRPS27-207ENST00000515404 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
MRPS27-207ENST00000515404 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
MRPS27-207ENST00000515404 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
MRPS27-207ENST00000515404 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
MRPS27-207ENST00000515404 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
MRPS27-207ENST00000515404 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
MRPS27-207ENST00000515404 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0.01
MRPS27-207ENST00000515404 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
MRPS27-207ENST00000515404 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
MRPS27-207ENST00000515404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
MRPS27-207ENST00000515404 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
MRPS27-207ENST00000515404 NCAPD3P42695 1498 aa15.06■□□□□ 0
MRPS27-207ENST00000515404 WIZO95785 1651 aa15.06■□□□□ 0
MRPS27-207ENST00000515404 CACNB1Q02641 598 aaPredicted RBP15.05■□□□□ -0
MRPS27-207ENST00000515404 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
MRPS27-207ENST00000515404 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
MRPS27-207ENST00000515404 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
MRPS27-207ENST00000515404 APLP2Q06481 763 aa14.96□□□□□ -0.01
MRPS27-207ENST00000515404 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
MRPS27-207ENST00000515404 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
MRPS27-207ENST00000515404 CAPN15O75808 1086 aa14.9□□□□□ -0.02
MRPS27-207ENST00000515404 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
MRPS27-207ENST00000515404 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
MRPS27-207ENST00000515404 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
MRPS27-207ENST00000515404 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
MRPS27-207ENST00000515404 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
MRPS27-207ENST00000515404 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
MRPS27-207ENST00000515404 CADPSQ9ULU8 1353 aa14.66□□□□□ -0.06
MRPS27-207ENST00000515404 CFTRP13569 1480 aa14.63□□□□□ -0.07
MRPS27-207ENST00000515404 ABCB7O75027 752 aa14.61□□□□□ -0.07
MRPS27-207ENST00000515404 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
MRPS27-207ENST00000515404 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
MRPS27-207ENST00000515404 DSG3P32926 999 aa14.5□□□□□ -0.09
MRPS27-207ENST00000515404 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
MRPS27-207ENST00000515404 POLA2Q14181 598 aa14.46□□□□□ -0.09
MRPS27-207ENST00000515404 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
MRPS27-207ENST00000515404 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
MRPS27-207ENST00000515404 PRDM2Q13029 1718 aa14.39□□□□□ -0.11
MRPS27-207ENST00000515404 NESP48681 1621 aa14.39□□□□□ -0.11
MRPS27-207ENST00000515404 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
MRPS27-207ENST00000515404 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
MRPS27-207ENST00000515404 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
MRPS27-207ENST00000515404 EEA1Q15075 1411 aa14.27□□□□□ -0.12
MRPS27-207ENST00000515404 CUX1P39880 1505 aa14.26□□□□□ -0.13
MRPS27-207ENST00000515404 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
MRPS27-207ENST00000515404 ZBTB12Q9Y330 459 aaPredicted RBP14.25□□□□□ -0.13
MRPS27-207ENST00000515404 BIVM-ERCC5R4GMW8 1640 aa14.25□□□□□ -0.13
MRPS27-207ENST00000515404 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
MRPS27-207ENST00000515404 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
MRPS27-207ENST00000515404 MRC2Q9UBG0 1479 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms