RNA–Protein interactions for RNA: ENST00000515187.5

RAP1GDS1-221, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

TSL 3

Gene RAP1GDS1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-221ENST00000515187 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
RAP1GDS1-221ENST00000515187 CHIC1Q5VXU3 224 aa16.46■□□□□ 0.23
RAP1GDS1-221ENST00000515187 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
RAP1GDS1-221ENST00000515187 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
RAP1GDS1-221ENST00000515187 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
RAP1GDS1-221ENST00000515187 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
RAP1GDS1-221ENST00000515187 ABCC9O60706 1549 aa13.78□□□□□ -0.2
RAP1GDS1-221ENST00000515187 FOXD1Q16676 465 aa13.44□□□□□ -0.26
RAP1GDS1-221ENST00000515187 NISCHQ9Y2I1 1504 aa13.31□□□□□ -0.28
RAP1GDS1-221ENST00000515187 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
RAP1GDS1-221ENST00000515187 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
RAP1GDS1-221ENST00000515187 ADRA2BP18089 450 aa12.78□□□□□ -0.36
RAP1GDS1-221ENST00000515187 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
RAP1GDS1-221ENST00000515187 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAP1GDS1-221ENST00000515187 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
RAP1GDS1-221ENST00000515187 PIAS4Q8N2W9 510 aaPredicted RBP12.58□□□□□ -0.4
RAP1GDS1-221ENST00000515187 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
RAP1GDS1-221ENST00000515187 MSH5O43196 834 aa12.51□□□□□ -0.41
RAP1GDS1-221ENST00000515187 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
RAP1GDS1-221ENST00000515187 CUX2O14529 1486 aa12.49□□□□□ -0.41
RAP1GDS1-221ENST00000515187 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
RAP1GDS1-221ENST00000515187 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
RAP1GDS1-221ENST00000515187 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
RAP1GDS1-221ENST00000515187 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
RAP1GDS1-221ENST00000515187 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
RAP1GDS1-221ENST00000515187 NACADO15069 1562 aa12.16□□□□□ -0.46
RAP1GDS1-221ENST00000515187 EIF4G1Q04637 1599 aaKnown RBP12.04□□□□□ -0.48
RAP1GDS1-221ENST00000515187 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
RAP1GDS1-221ENST00000515187 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.49
RAP1GDS1-221ENST00000515187 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
RAP1GDS1-221ENST00000515187 DCAF8L2P0C7V8 631 aa11.74□□□□□ -0.53
RAP1GDS1-221ENST00000515187 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
RAP1GDS1-221ENST00000515187 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
RAP1GDS1-221ENST00000515187 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
RAP1GDS1-221ENST00000515187 RIMBP3CA6NJZ7 1639 aa11.63□□□□□ -0.55
RAP1GDS1-221ENST00000515187 RIMBP3BA6NNM3 1639 aa11.63□□□□□ -0.55
RAP1GDS1-221ENST00000515187 RIMBP3Q9UFD9 1639 aa11.63□□□□□ -0.55
RAP1GDS1-221ENST00000515187 THOC2Q8NI27 1593 aaKnown RBP11.61□□□□□ -0.55
RAP1GDS1-221ENST00000515187 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
RAP1GDS1-221ENST00000515187 MYO15BQ96JP2 1530 aa11.59□□□□□ -0.55
RAP1GDS1-221ENST00000515187 BAZ1AQ9NRL2 1556 aaPredicted RBP11.57□□□□□ -0.56
RAP1GDS1-221ENST00000515187 SOCS7O14512 581 aa11.52□□□□□ -0.57
RAP1GDS1-221ENST00000515187 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
RAP1GDS1-221ENST00000515187 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
RAP1GDS1-221ENST00000515187 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
RAP1GDS1-221ENST00000515187 CYB5RLQ6IPT4 315 aa11.47□□□□□ -0.57
RAP1GDS1-221ENST00000515187 NESP48681 1621 aa11.43□□□□□ -0.58
RAP1GDS1-221ENST00000515187 FBXO41Q8TF61 875 aa11.4□□□□□ -0.58
RAP1GDS1-221ENST00000515187 SCRIBQ14160 1630 aa11.37□□□□□ -0.59
RAP1GDS1-221ENST00000515187 SMARCA2P51531 1590 aa11.37□□□□□ -0.59
RAP1GDS1-221ENST00000515187 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
RAP1GDS1-221ENST00000515187 ILDR2Q71H61 639 aa11.3□□□□□ -0.6
RAP1GDS1-221ENST00000515187 KCNA4P22459 653 aa11.27□□□□□ -0.61
RAP1GDS1-221ENST00000515187 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
RAP1GDS1-221ENST00000515187 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
RAP1GDS1-221ENST00000515187 NCAPD3P42695 1498 aa11.25□□□□□ -0.61
RAP1GDS1-221ENST00000515187 ERCC6L2Q5T890 1561 aa11.24□□□□□ -0.61
RAP1GDS1-221ENST00000515187 HOXD11P31277 338 aaPredicted RBP11.22□□□□□ -0.61
RAP1GDS1-221ENST00000515187 KIF21AQ7Z4S6 1674 aa11.21□□□□□ -0.61
RAP1GDS1-221ENST00000515187 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
RAP1GDS1-221ENST00000515187 PDS5BQ9NTI5 1447 aa11.19□□□□□ -0.62
RAP1GDS1-221ENST00000515187 NPM3O75607 178 aaKnown RBP11.19□□□□□ -0.62
RAP1GDS1-221ENST00000515187 RNF216Q9NWF9 866 aaPredicted RBP11.19□□□□□ -0.62
RAP1GDS1-221ENST00000515187 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
RAP1GDS1-221ENST00000515187 WDR62O43379 1518 aa11.18□□□□□ -0.62
RAP1GDS1-221ENST00000515187 MRC2Q9UBG0 1479 aa11.15□□□□□ -0.62
RAP1GDS1-221ENST00000515187 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
RAP1GDS1-221ENST00000515187 HECW2Q9P2P5 1572 aa11.07□□□□□ -0.64
RAP1GDS1-221ENST00000515187 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
RAP1GDS1-221ENST00000515187 HMGXB3Q12766 1538 aa11.03□□□□□ -0.64
RAP1GDS1-221ENST00000515187 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
RAP1GDS1-221ENST00000515187 SYNJ2O15056 1496 aa10.93□□□□□ -0.66
RAP1GDS1-221ENST00000515187 DCAF8L1A6NGE4 600 aa10.93□□□□□ -0.66
RAP1GDS1-221ENST00000515187 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
RAP1GDS1-221ENST00000515187 SPATA31D1Q6ZQQ2 1576 aa10.86□□□□□ -0.67
RAP1GDS1-221ENST00000515187 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
RAP1GDS1-221ENST00000515187 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
RAP1GDS1-221ENST00000515187 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
RAP1GDS1-221ENST00000515187 BAZ1BQ9UIG0 1483 aaKnown RBP10.81□□□□□ -0.68
RAP1GDS1-221ENST00000515187 ADGRL1O94910 1474 aa10.79□□□□□ -0.68
RAP1GDS1-221ENST00000515187 ZNF608Q9ULD9 1512 aaPredicted RBP10.77□□□□□ -0.69
RAP1GDS1-221ENST00000515187 CHD1O14646 1710 aa10.76□□□□□ -0.69
RAP1GDS1-221ENST00000515187 SMARCA4P51532 1647 aa10.74□□□□□ -0.69
RAP1GDS1-221ENST00000515187 ZCCHC6Q5VYS8 1495 aaKnown RBP10.72□□□□□ -0.69
RAP1GDS1-221ENST00000515187 KIF13AQ9H1H9 1805 aa10.72□□□□□ -0.69
RAP1GDS1-221ENST00000515187 KDM6BO15054 1643 aa10.71□□□□□ -0.69
RAP1GDS1-221ENST00000515187 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
RAP1GDS1-221ENST00000515187 IFT140Q96RY7 1462 aa10.69□□□□□ -0.7
RAP1GDS1-221ENST00000515187 FBLN2P98095 1184 aa10.69□□□□□ -0.7
RAP1GDS1-221ENST00000515187 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
RAP1GDS1-221ENST00000515187 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
RAP1GDS1-221ENST00000515187 CLASP1Q7Z460 1538 aa10.68□□□□□ -0.7
RAP1GDS1-221ENST00000515187 RNF39Q9H2S5 420 aa10.67□□□□□ -0.7
RAP1GDS1-221ENST00000515187 SLC4A1APQ9BWU0 796 aaKnown RBP10.66□□□□□ -0.7
RAP1GDS1-221ENST00000515187 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
RAP1GDS1-221ENST00000515187 EIF4G3O43432 1585 aaKnown RBP10.63□□□□□ -0.71
RAP1GDS1-221ENST00000515187 CERKQ8TCT0 537 aa10.61□□□□□ -0.71
RAP1GDS1-221ENST00000515187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.61□□□□□ -0.71
RAP1GDS1-221ENST00000515187 FAM69CQ0P6D2 419 aa10.58□□□□□ -0.72
RAP1GDS1-221ENST00000515187 PEG3Q9GZU2 1588 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms