RNA–Protein interactions for RNA: ENST00000514272.2

C15orf40-208, Transcript of chromosome 15 open reading frame 40, humanhuman

TSL 2

Gene C15orf40, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf40-208ENST00000514272 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
C15orf40-208ENST00000514272 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
C15orf40-208ENST00000514272 NISCHQ9Y2I1 1504 aa18.86■□□□□ 0.61
C15orf40-208ENST00000514272 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
C15orf40-208ENST00000514272 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
C15orf40-208ENST00000514272 FOXD1Q16676 465 aa17.18■□□□□ 0.34
C15orf40-208ENST00000514272 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
C15orf40-208ENST00000514272 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
C15orf40-208ENST00000514272 ABCC9O60706 1549 aa16.36■□□□□ 0.21
C15orf40-208ENST00000514272 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
C15orf40-208ENST00000514272 ADRA2BP18089 450 aa16.21■□□□□ 0.19
C15orf40-208ENST00000514272 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
C15orf40-208ENST00000514272 MSH5O43196 834 aa16.05■□□□□ 0.16
C15orf40-208ENST00000514272 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
C15orf40-208ENST00000514272 NACADO15069 1562 aa15.7■□□□□ 0.1
C15orf40-208ENST00000514272 ZCCHC6Q5VYS8 1495 aaKnown RBP15.7■□□□□ 0.1
C15orf40-208ENST00000514272 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
C15orf40-208ENST00000514272 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
C15orf40-208ENST00000514272 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.08
C15orf40-208ENST00000514272 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
C15orf40-208ENST00000514272 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
C15orf40-208ENST00000514272 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
C15orf40-208ENST00000514272 UNC13AQ9UPW8 1703 aa15.19■□□□□ 0.02
C15orf40-208ENST00000514272 SHROOM4Q9ULL8 1493 aa15.06■□□□□ 0
C15orf40-208ENST00000514272 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
C15orf40-208ENST00000514272 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
C15orf40-208ENST00000514272 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
C15orf40-208ENST00000514272 PPP4R3CPQ6ZMV5 832 aa14.84□□□□□ -0.03
C15orf40-208ENST00000514272 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
C15orf40-208ENST00000514272 MAPK8IP2Q13387 824 aaPredicted RBP14.76□□□□□ -0.05
C15orf40-208ENST00000514272 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
C15orf40-208ENST00000514272 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
C15orf40-208ENST00000514272 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
C15orf40-208ENST00000514272 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
C15orf40-208ENST00000514272 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
C15orf40-208ENST00000514272 ATAD2BQ9ULI0 1458 aa14.55□□□□□ -0.08
C15orf40-208ENST00000514272 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
C15orf40-208ENST00000514272 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
C15orf40-208ENST00000514272 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
C15orf40-208ENST00000514272 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
C15orf40-208ENST00000514272 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
C15orf40-208ENST00000514272 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
C15orf40-208ENST00000514272 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
C15orf40-208ENST00000514272 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
C15orf40-208ENST00000514272 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
C15orf40-208ENST00000514272 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
C15orf40-208ENST00000514272 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
C15orf40-208ENST00000514272 WIZO95785 1651 aa14.33□□□□□ -0.11
C15orf40-208ENST00000514272 SUPT5HO00267 1087 aaKnown RBP14.22□□□□□ -0.13
C15orf40-208ENST00000514272 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
C15orf40-208ENST00000514272 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
C15orf40-208ENST00000514272 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
C15orf40-208ENST00000514272 NESP48681 1621 aa14.15□□□□□ -0.14
C15orf40-208ENST00000514272 KCNA4P22459 653 aa14.13□□□□□ -0.15
C15orf40-208ENST00000514272 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
C15orf40-208ENST00000514272 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
C15orf40-208ENST00000514272 LAMC3Q9Y6N6 1575 aa14.08□□□□□ -0.16
C15orf40-208ENST00000514272 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
C15orf40-208ENST00000514272 CFTRP13569 1480 aa14.04□□□□□ -0.16
C15orf40-208ENST00000514272 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
C15orf40-208ENST00000514272 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
C15orf40-208ENST00000514272 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
C15orf40-208ENST00000514272 CUX2O14529 1486 aa13.89□□□□□ -0.19
C15orf40-208ENST00000514272 MRC2Q9UBG0 1479 aa13.88□□□□□ -0.19
C15orf40-208ENST00000514272 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
C15orf40-208ENST00000514272 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.19
C15orf40-208ENST00000514272 WDR62O43379 1518 aa13.8□□□□□ -0.2
C15orf40-208ENST00000514272 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
C15orf40-208ENST00000514272 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
C15orf40-208ENST00000514272 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
C15orf40-208ENST00000514272 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
C15orf40-208ENST00000514272 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
C15orf40-208ENST00000514272 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
C15orf40-208ENST00000514272 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
C15orf40-208ENST00000514272 CUX1P39880 1505 aa13.63□□□□□ -0.23
C15orf40-208ENST00000514272 SOGA1O94964 1423 aa13.62□□□□□ -0.23
C15orf40-208ENST00000514272 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
C15orf40-208ENST00000514272 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
C15orf40-208ENST00000514272 FGD5Q6ZNL6 1462 aa13.59□□□□□ -0.23
C15orf40-208ENST00000514272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.24
C15orf40-208ENST00000514272 RAD54L2Q9Y4B4 1467 aa13.58□□□□□ -0.24
C15orf40-208ENST00000514272 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
C15orf40-208ENST00000514272 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
C15orf40-208ENST00000514272 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
C15orf40-208ENST00000514272 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.24
C15orf40-208ENST00000514272 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
C15orf40-208ENST00000514272 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
C15orf40-208ENST00000514272 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
C15orf40-208ENST00000514272 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
C15orf40-208ENST00000514272 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
C15orf40-208ENST00000514272 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
C15orf40-208ENST00000514272 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
C15orf40-208ENST00000514272 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
C15orf40-208ENST00000514272 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
C15orf40-208ENST00000514272 FBLN2P98095 1184 aa13.44□□□□□ -0.26
C15orf40-208ENST00000514272 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
C15orf40-208ENST00000514272 EIF4G3O43432 1585 aaKnown RBP13.43□□□□□ -0.26
C15orf40-208ENST00000514272 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
C15orf40-208ENST00000514272 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
C15orf40-208ENST00000514272 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms