RNA–Protein interactions for RNA: ENST00000509645.1

CAMK4-208, Transcript of calcium/calmodulin dependent protein kinase IV, human

TSL 1 (best)

Gene CAMK4, Length 2,560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMK4-208	ENST00000509645	NISCH	Q9Y2I1	1504 aa		15.33	■□□□□ 0.04
CAMK4-208	ENST00000509645	AEBP2	Q6ZN18	517 aa	Predicted RBP	14.45	□□□□□ -0.1
CAMK4-208	ENST00000509645	CHIC1	Q5VXU3	224 aa		13.88	□□□□□ -0.19
CAMK4-208	ENST00000509645	SHROOM4	Q9ULL8	1493 aa		13.41	□□□□□ -0.26
CAMK4-208	ENST00000509645	DCAF8L2	P0C7V8	631 aa		13.15	□□□□□ -0.3
CAMK4-208	ENST00000509645	SUPT5H	O00267	1087 aa	Known RBP	13.09	□□□□□ -0.31
CAMK4-208	ENST00000509645	CCDC180	Q9P1Z9	1646 aa		12.95	□□□□□ -0.34
CAMK4-208	ENST00000509645	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.93	□□□□□ -0.34
CAMK4-208	ENST00000509645	SENP3	Q9H4L4	574 aa	Predicted RBP	12.77	□□□□□ -0.37
CAMK4-208	ENST00000509645	MYO15B	Q96JP2	1530 aa		12.51	□□□□□ -0.41
CAMK4-208	ENST00000509645	SLC24A1	O60721	1099 aa		12.41	□□□□□ -0.42
CAMK4-208	ENST00000509645	SCRIB	Q14160	1630 aa		12.41	□□□□□ -0.42
CAMK4-208	ENST00000509645	DCAF1	Q9Y4B6	1507 aa		12.39	□□□□□ -0.43
CAMK4-208	ENST00000509645	ABCC9	O60706	1549 aa		12.37	□□□□□ -0.43
CAMK4-208	ENST00000509645	PHF23	Q9BUL5	403 aa	Predicted RBP	12.35	□□□□□ -0.43
CAMK4-208	ENST00000509645	LOC105371045	A0A1W2PR82	267 aa		12.28	□□□□□ -0.44
CAMK4-208	ENST00000509645	EHMT2	Q96KQ7	1210 aa		12.24	□□□□□ -0.45
CAMK4-208	ENST00000509645	PCGF6	Q9BYE7	350 aa		12.22	□□□□□ -0.45
CAMK4-208	ENST00000509645	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.17	□□□□□ -0.46
CAMK4-208	ENST00000509645	RSF1	Q96T23	1441 aa	Predicted RBP	12.15	□□□□□ -0.46
CAMK4-208	ENST00000509645	RB1CC1	Q8TDY2	1594 aa		12.11	□□□□□ -0.47
CAMK4-208	ENST00000509645	CECR2	Q9BXF3	1484 aa		12.09	□□□□□ -0.47
CAMK4-208	ENST00000509645	TRIM41	Q8WV44	630 aa		12.08	□□□□□ -0.48
CAMK4-208	ENST00000509645	POTED	Q86YR6	584 aa		12.06	□□□□□ -0.48
CAMK4-208	ENST00000509645	NACAD	O15069	1562 aa		12.02	□□□□□ -0.49
CAMK4-208	ENST00000509645	HRC	P23327	699 aa		12.01	□□□□□ -0.49
CAMK4-208	ENST00000509645	PPARGC1B	Q86YN6	1023 aa	Known RBP	12	□□□□□ -0.49
CAMK4-208	ENST00000509645	MROH2B	Q7Z745	1585 aa		12	□□□□□ -0.49
CAMK4-208	ENST00000509645	WIZ	O95785	1651 aa		11.97	□□□□□ -0.49
CAMK4-208	ENST00000509645	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
CAMK4-208	ENST00000509645	TRIM26	Q12899	539 aa	Predicted RBP	11.82	□□□□□ -0.52
CAMK4-208	ENST00000509645	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.8	□□□□□ -0.52
CAMK4-208	ENST00000509645	UNC13A	Q9UPW8	1703 aa		11.77	□□□□□ -0.53
CAMK4-208	ENST00000509645	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.77	□□□□□ -0.53
CAMK4-208	ENST00000509645	FOXD1	Q16676	465 aa		11.75	□□□□□ -0.53
CAMK4-208	ENST00000509645	ABCC8	Q09428	1581 aa		11.75	□□□□□ -0.53
CAMK4-208	ENST00000509645	SMARCA4	P51532	1647 aa		11.71	□□□□□ -0.53
CAMK4-208	ENST00000509645	CCDC88B	A6NC98	1476 aa		11.68	□□□□□ -0.54
CAMK4-208	ENST00000509645	TOP2A	P11388	1531 aa	Known RBP	11.66	□□□□□ -0.54
CAMK4-208	ENST00000509645	PLPPR3	Q6T4P5	718 aa		11.66	□□□□□ -0.54
CAMK4-208	ENST00000509645	SMARCA2	P51531	1590 aa		11.64	□□□□□ -0.55
CAMK4-208	ENST00000509645	EIF4G1	Q04637	1599 aa	Known RBP	11.63	□□□□□ -0.55
CAMK4-208	ENST00000509645	SOGA1	O94964	1423 aa		11.59	□□□□□ -0.55
CAMK4-208	ENST00000509645	BICRA	Q9NZM4	1560 aa		11.59	□□□□□ -0.55
CAMK4-208	ENST00000509645	RANGAP1	P46060	587 aa	Predicted RBP	11.58	□□□□□ -0.56
CAMK4-208	ENST00000509645	UBTF	P17480	764 aa	Known RBP	11.57	□□□□□ -0.56
CAMK4-208	ENST00000509645	RUSC2	Q8N2Y8	1516 aa		11.56	□□□□□ -0.56
CAMK4-208	ENST00000509645	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.55	□□□□□ -0.56
CAMK4-208	ENST00000509645	MSH5	O43196	834 aa		11.53	□□□□□ -0.56
CAMK4-208	ENST00000509645	CEP162	Q5TB80	1403 aa		11.47	□□□□□ -0.57
CAMK4-208	ENST00000509645	CSRNP3	Q8WYN3	585 aa		11.47	□□□□□ -0.57
CAMK4-208	ENST00000509645	CCER1	Q8TC90	406 aa	Predicted RBP	11.47	□□□□□ -0.57
CAMK4-208	ENST00000509645	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.45	□□□□□ -0.58
CAMK4-208	ENST00000509645	ZEB1	P37275	1124 aa	Predicted RBP	11.45	□□□□□ -0.58
CAMK4-208	ENST00000509645	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.44	□□□□□ -0.58
CAMK4-208	ENST00000509645	ATAD2B	Q9ULI0	1458 aa		11.43	□□□□□ -0.58
CAMK4-208	ENST00000509645	RTN4	Q9NQC3	1192 aa	Known RBP	11.42	□□□□□ -0.58
CAMK4-208	ENST00000509645	SYNJ1	O43426	1573 aa		11.42	□□□□□ -0.58
CAMK4-208	ENST00000509645	TNIK	Q9UKE5	1360 aa		11.36	□□□□□ -0.59
CAMK4-208	ENST00000509645	GOLGA3	Q08378	1498 aa		11.35	□□□□□ -0.59
CAMK4-208	ENST00000509645	PEG3	Q9GZU2	1588 aa		11.34	□□□□□ -0.59
CAMK4-208	ENST00000509645	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.33	□□□□□ -0.6
CAMK4-208	ENST00000509645	PELP1	Q8IZL8	1130 aa	Known RBP	11.33	□□□□□ -0.6
CAMK4-208	ENST00000509645	EEA1	Q15075	1411 aa		11.31	□□□□□ -0.6
CAMK4-208	ENST00000509645	RAPGEF2	Q9Y4G8	1499 aa		11.29	□□□□□ -0.6
CAMK4-208	ENST00000509645	CLIP1	P30622	1438 aa		11.27	□□□□□ -0.61
CAMK4-208	ENST00000509645	CEP164	Q9UPV0	1460 aa		11.27	□□□□□ -0.61
CAMK4-208	ENST00000509645	APLP2	Q06481	763 aa		11.25	□□□□□ -0.61
CAMK4-208	ENST00000509645	MYT1	Q01538	1121 aa		11.21	□□□□□ -0.61
CAMK4-208	ENST00000509645	KIF21B	O75037	1637 aa		11.2	□□□□□ -0.62
CAMK4-208	ENST00000509645	TOP2B	Q02880	1626 aa		11.18	□□□□□ -0.62
CAMK4-208	ENST00000509645	VPS8	Q8N3P4	1428 aa		11.16	□□□□□ -0.62
CAMK4-208	ENST00000509645	CUX1	P39880	1505 aa		11.16	□□□□□ -0.62
CAMK4-208	ENST00000509645	DIEXF	Q68CQ4	756 aa	Known RBP	11.15	□□□□□ -0.62
CAMK4-208	ENST00000509645	ITGAE	P38570	1179 aa		11.14	□□□□□ -0.63
CAMK4-208	ENST00000509645	NCAPD3	P42695	1498 aa		11.13	□□□□□ -0.63
CAMK4-208	ENST00000509645	BIVM-ERCC5	R4GMW8	1640 aa		11.12	□□□□□ -0.63
CAMK4-208	ENST00000509645	SCAF1	Q9H7N4	1312 aa	Known RBP	11.12	□□□□□ -0.63
CAMK4-208	ENST00000509645	HMGXB3	Q12766	1538 aa		11.11	□□□□□ -0.63
CAMK4-208	ENST00000509645	KANK4	Q5T7N3	995 aa	Predicted RBP	11.11	□□□□□ -0.63
CAMK4-208	ENST00000509645	YTHDC1	Q96MU7	727 aa	Known RBP	11.1	□□□□□ -0.63
CAMK4-208	ENST00000509645	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.09	□□□□□ -0.63
CAMK4-208	ENST00000509645	KCNA4	P22459	653 aa		11.08	□□□□□ -0.64
CAMK4-208	ENST00000509645	P3H3	Q8IVL6	736 aa		11.08	□□□□□ -0.64
CAMK4-208	ENST00000509645	KIF27	Q86VH2	1401 aa		11.08	□□□□□ -0.64
CAMK4-208	ENST00000509645	CFTR	P13569	1480 aa		11.07	□□□□□ -0.64
CAMK4-208	ENST00000509645	PRKCSH	P14314	528 aa	Predicted RBP	11.07	□□□□□ -0.64
CAMK4-208	ENST00000509645	CUX2	O14529	1486 aa		11.06	□□□□□ -0.64
CAMK4-208	ENST00000509645	ARAP1	Q96P48	1450 aa		11.06	□□□□□ -0.64
CAMK4-208	ENST00000509645	PRX	Q9BXM0	1461 aa		11.06	□□□□□ -0.64
CAMK4-208	ENST00000509645	NEUROD1	Q13562	356 aa		11.04	□□□□□ -0.64
CAMK4-208	ENST00000509645	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.03	□□□□□ -0.64
CAMK4-208	ENST00000509645	DAXX	Q9UER7	740 aa	Predicted RBP	11.03	□□□□□ -0.64
CAMK4-208	ENST00000509645	CC2D2A	Q9P2K1	1620 aa		11.02	□□□□□ -0.65
CAMK4-208	ENST00000509645	ERICH3	Q5RHP9	1530 aa		11.01	□□□□□ -0.65
CAMK4-208	ENST00000509645	FGD5	Q6ZNL6	1462 aa		11	□□□□□ -0.65
CAMK4-208	ENST00000509645	CADPS	Q9ULU8	1353 aa		11	□□□□□ -0.65
CAMK4-208	ENST00000509645	NCBP3	Q53F19	620 aa	Known RBP	10.99	□□□□□ -0.65
CAMK4-208	ENST00000509645	NES	P48681	1621 aa		10.99	□□□□□ -0.65
CAMK4-208	ENST00000509645	ARHGAP35	Q9NRY4	1499 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms