RNA–Protein interactions for RNA: ENST00000509232.5

NAF1-204, Transcript of nuclear assembly factor 1 ribonucleoprotein, humanhuman

TSL 2

Gene NAF1, Length 2,329 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1-204ENST00000509232 NISCHQ9Y2I1 1504 aa31.35■■■□□ 2.61
NAF1-204ENST00000509232 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
NAF1-204ENST00000509232 CCDC180Q9P1Z9 1646 aa26.62■■□□□ 1.85
NAF1-204ENST00000509232 ZCCHC6Q5VYS8 1495 aaKnown RBP26.57■■□□□ 1.84
NAF1-204ENST00000509232 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
NAF1-204ENST00000509232 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
NAF1-204ENST00000509232 DCAF1Q9Y4B6 1507 aa25.75■■□□□ 1.71
NAF1-204ENST00000509232 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
NAF1-204ENST00000509232 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
NAF1-204ENST00000509232 HRCP23327 699 aa25.6■■□□□ 1.69
NAF1-204ENST00000509232 ABCC9O60706 1549 aa25.35■■□□□ 1.65
NAF1-204ENST00000509232 PCGF6Q9BYE7 350 aa25.32■■□□□ 1.64
NAF1-204ENST00000509232 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
NAF1-204ENST00000509232 PPARGC1BQ86YN6 1023 aaKnown RBP24.97■■□□□ 1.59
NAF1-204ENST00000509232 SCRIBQ14160 1630 aa24.93■■□□□ 1.58
NAF1-204ENST00000509232 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
NAF1-204ENST00000509232 NACADO15069 1562 aa24.81■■□□□ 1.56
NAF1-204ENST00000509232 TRIM26Q12899 539 aaPredicted RBP24.77■■□□□ 1.56
NAF1-204ENST00000509232 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
NAF1-204ENST00000509232 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
NAF1-204ENST00000509232 CECR2Q9BXF3 1484 aa24.44■■□□□ 1.5
NAF1-204ENST00000509232 ZEB1P37275 1124 aaPredicted RBP24.43■■□□□ 1.5
NAF1-204ENST00000509232 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
NAF1-204ENST00000509232 WIZO95785 1651 aa24.27■■□□□ 1.47
NAF1-204ENST00000509232 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
NAF1-204ENST00000509232 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
NAF1-204ENST00000509232 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
NAF1-204ENST00000509232 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
NAF1-204ENST00000509232 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
NAF1-204ENST00000509232 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
NAF1-204ENST00000509232 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
NAF1-204ENST00000509232 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
NAF1-204ENST00000509232 SMARCA4P51532 1647 aa23.86■■□□□ 1.41
NAF1-204ENST00000509232 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
NAF1-204ENST00000509232 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
NAF1-204ENST00000509232 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
NAF1-204ENST00000509232 CCDC88BA6NC98 1476 aa23.77■■□□□ 1.4
NAF1-204ENST00000509232 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
NAF1-204ENST00000509232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
NAF1-204ENST00000509232 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
NAF1-204ENST00000509232 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.36
NAF1-204ENST00000509232 SOGA1O94964 1423 aa23.55■■□□□ 1.36
NAF1-204ENST00000509232 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
NAF1-204ENST00000509232 ACIN1Q9UKV3 1341 aaKnown RBP23.48■■□□□ 1.35
NAF1-204ENST00000509232 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
NAF1-204ENST00000509232 EEA1Q15075 1411 aa23.45■■□□□ 1.34
NAF1-204ENST00000509232 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
NAF1-204ENST00000509232 PEG3Q9GZU2 1588 aa23.42■■□□□ 1.34
NAF1-204ENST00000509232 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
NAF1-204ENST00000509232 NEUROD1Q13562 356 aa23.39■■□□□ 1.34
NAF1-204ENST00000509232 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
NAF1-204ENST00000509232 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
NAF1-204ENST00000509232 CENPBP07199 599 aaPredicted RBP23.31■■□□□ 1.32
NAF1-204ENST00000509232 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
NAF1-204ENST00000509232 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
NAF1-204ENST00000509232 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
NAF1-204ENST00000509232 UBTFP17480 764 aaKnown RBP23.24■■□□□ 1.31
NAF1-204ENST00000509232 GTF3C3Q9Y5Q9 886 aa23.21■■□□□ 1.31
NAF1-204ENST00000509232 KIF21BO75037 1637 aa23.18■■□□□ 1.3
NAF1-204ENST00000509232 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
NAF1-204ENST00000509232 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
NAF1-204ENST00000509232 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
NAF1-204ENST00000509232 CLIP1P30622 1438 aa23.02■■□□□ 1.28
NAF1-204ENST00000509232 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
NAF1-204ENST00000509232 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
NAF1-204ENST00000509232 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
NAF1-204ENST00000509232 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
NAF1-204ENST00000509232 HNRNPUL2Q1KMD3 747 aaKnown RBP22.94■■□□□ 1.26
NAF1-204ENST00000509232 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.25
NAF1-204ENST00000509232 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
NAF1-204ENST00000509232 YTHDC1Q96MU7 727 aaKnown RBP22.86■■□□□ 1.25
NAF1-204ENST00000509232 MIER1Q8N108 512 aa22.85■■□□□ 1.25
NAF1-204ENST00000509232 APLP2Q06481 763 aa22.83■■□□□ 1.25
NAF1-204ENST00000509232 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
NAF1-204ENST00000509232 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
NAF1-204ENST00000509232 PRXQ9BXM0 1461 aa22.76■■□□□ 1.23
NAF1-204ENST00000509232 MYT1Q01538 1121 aa22.75■■□□□ 1.23
NAF1-204ENST00000509232 RANGAP1P46060 587 aaPredicted RBP22.72■■□□□ 1.23
NAF1-204ENST00000509232 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
NAF1-204ENST00000509232 CUX1P39880 1505 aa22.7■■□□□ 1.22
NAF1-204ENST00000509232 CLSPNQ9HAW4 1339 aa22.63■■□□□ 1.21
NAF1-204ENST00000509232 CFTRP13569 1480 aa22.58■■□□□ 1.21
NAF1-204ENST00000509232 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
NAF1-204ENST00000509232 DHX57Q6P158 1386 aaKnown RBP22.55■■□□□ 1.2
NAF1-204ENST00000509232 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
NAF1-204ENST00000509232 KANK4Q5T7N3 995 aaPredicted RBP22.53■■□□□ 1.2
NAF1-204ENST00000509232 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
NAF1-204ENST00000509232 RRBP1Q9P2E9 1410 aaKnown RBP22.47■■□□□ 1.19
NAF1-204ENST00000509232 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
NAF1-204ENST00000509232 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
NAF1-204ENST00000509232 CUX2O14529 1486 aa22.38■■□□□ 1.17
NAF1-204ENST00000509232 NESP48681 1621 aa22.35■■□□□ 1.17
NAF1-204ENST00000509232 CCNB3Q8WWL7 1395 aa22.33■■□□□ 1.16
NAF1-204ENST00000509232 IGF1RP08069 1367 aa22.32■■□□□ 1.16
NAF1-204ENST00000509232 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
NAF1-204ENST00000509232 FANCD2Q9BXW9 1451 aa22.25■■□□□ 1.15
NAF1-204ENST00000509232 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
NAF1-204ENST00000509232 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
NAF1-204ENST00000509232 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
NAF1-204ENST00000509232 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms