RNA–Protein interactions for RNA: ENST00000508350.1

CDH18-208, Transcript of cadherin 18, humanhuman

TSL 4

Gene CDH18, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-208ENST00000508350 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
CDH18-208ENST00000508350 CHIC1Q5VXU3 224 aa12.53□□□□□ -0.4
CDH18-208ENST00000508350 SENP3Q9H4L4 574 aaPredicted RBP11.32□□□□□ -0.6
CDH18-208ENST00000508350 PHF23Q9BUL5 403 aaPredicted RBP11.1□□□□□ -0.63
CDH18-208ENST00000508350 NISCHQ9Y2I1 1504 aa10.84□□□□□ -0.67
CDH18-208ENST00000508350 FOXD1Q16676 465 aa10.43□□□□□ -0.74
CDH18-208ENST00000508350 PLPPR3Q6T4P5 718 aa10.08□□□□□ -0.8
CDH18-208ENST00000508350 MSH5O43196 834 aa9.91□□□□□ -0.82
CDH18-208ENST00000508350 PIAS4Q8N2W9 510 aaPredicted RBP9.8□□□□□ -0.84
CDH18-208ENST00000508350 ADRA2BP18089 450 aa9.69□□□□□ -0.86
CDH18-208ENST00000508350 PPP6R1Q9UPN7 881 aa9.69□□□□□ -0.86
CDH18-208ENST00000508350 CCDC180Q9P1Z9 1646 aa9.55□□□□□ -0.88
CDH18-208ENST00000508350 POTEDQ86YR6 584 aa9.52□□□□□ -0.89
CDH18-208ENST00000508350 ABCC9O60706 1549 aa9.4□□□□□ -0.91
CDH18-208ENST00000508350 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
CDH18-208ENST00000508350 SCAF1Q9H7N4 1312 aaKnown RBP9.1□□□□□ -0.95
CDH18-208ENST00000508350 ZCCHC6Q5VYS8 1495 aaKnown RBP9.03□□□□□ -0.96
CDH18-208ENST00000508350 NACADO15069 1562 aa8.98□□□□□ -0.97
CDH18-208ENST00000508350 RB1CC1Q8TDY2 1594 aa8.98□□□□□ -0.97
CDH18-208ENST00000508350 DMRT2Q9Y5R5 561 aa8.93□□□□□ -0.98
CDH18-208ENST00000508350 DCAF1Q9Y4B6 1507 aa8.91□□□□□ -0.98
CDH18-208ENST00000508350 MYO15BQ96JP2 1530 aa8.9□□□□□ -0.98
CDH18-208ENST00000508350 MAPK8IP2Q13387 824 aaPredicted RBP8.87□□□□□ -0.99
CDH18-208ENST00000508350 PABPN1Q86U42 306 aaKnown RBP eCLIP8.83□□□□□ -1
CDH18-208ENST00000508350 UNC13AQ9UPW8 1703 aa8.83□□□□□ -1
CDH18-208ENST00000508350 SCRIBQ14160 1630 aa8.81□□□□□ -1
CDH18-208ENST00000508350 PPP4R3CPQ6ZMV5 832 aa8.77□□□□□ -1.01
CDH18-208ENST00000508350 BICRAQ9NZM4 1560 aa8.76□□□□□ -1.01
CDH18-208ENST00000508350 SHROOM4Q9ULL8 1493 aa8.71□□□□□ -1.01
CDH18-208ENST00000508350 CNKSR2Q8WXI2 1034 aa8.67□□□□□ -1.02
CDH18-208ENST00000508350 DNAJC5BQ9UF47 199 aa8.63□□□□□ -1.03
CDH18-208ENST00000508350 HOXD11P31277 338 aaPredicted RBP8.61□□□□□ -1.03
CDH18-208ENST00000508350 RNF216Q9NWF9 866 aaPredicted RBP8.58□□□□□ -1.04
CDH18-208ENST00000508350 NCBP3Q53F19 620 aaKnown RBP8.57□□□□□ -1.04
CDH18-208ENST00000508350 DCAF8L1A6NGE4 600 aa8.56□□□□□ -1.04
CDH18-208ENST00000508350 EIF4G1Q04637 1599 aaKnown RBP8.5□□□□□ -1.05
CDH18-208ENST00000508350 CECR2Q9BXF3 1484 aa8.5□□□□□ -1.05
CDH18-208ENST00000508350 CC2D2AQ9P2K1 1620 aa8.47□□□□□ -1.05
CDH18-208ENST00000508350 CACNB1Q02641 598 aaPredicted RBP8.45□□□□□ -1.06
CDH18-208ENST00000508350 SMARCA4P51532 1647 aa8.4□□□□□ -1.07
CDH18-208ENST00000508350 MROH2BQ7Z745 1585 aa8.39□□□□□ -1.07
CDH18-208ENST00000508350 RNF39Q9H2S5 420 aa8.37□□□□□ -1.07
CDH18-208ENST00000508350 BAZ1AQ9NRL2 1556 aaPredicted RBP8.36□□□□□ -1.07
CDH18-208ENST00000508350 ATAD2BQ9ULI0 1458 aa8.34□□□□□ -1.07
CDH18-208ENST00000508350 C1QBPQ07021 282 aaKnown RBP8.33□□□□□ -1.08
CDH18-208ENST00000508350 RSF1Q96T23 1441 aaPredicted RBP8.31□□□□□ -1.08
CDH18-208ENST00000508350 NCAPD3P42695 1498 aa8.31□□□□□ -1.08
CDH18-208ENST00000508350 WIZO95785 1651 aa8.3□□□□□ -1.08
CDH18-208ENST00000508350 SMARCA2P51531 1590 aa8.3□□□□□ -1.08
CDH18-208ENST00000508350 NPM3O75607 178 aaKnown RBP8.28□□□□□ -1.08
CDH18-208ENST00000508350 PEG3Q9GZU2 1588 aa8.27□□□□□ -1.09
CDH18-208ENST00000508350 BAZ1BQ9UIG0 1483 aaKnown RBP8.27□□□□□ -1.09
CDH18-208ENST00000508350 HMGXB3Q12766 1538 aa8.24□□□□□ -1.09
CDH18-208ENST00000508350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDH18-208ENST00000508350 SUPT5HO00267 1087 aaKnown RBP8.21□□□□□ -1.1
CDH18-208ENST00000508350 TOP2AP11388 1531 aaKnown RBP8.18□□□□□ -1.1
CDH18-208ENST00000508350 NESP48681 1621 aa8.16□□□□□ -1.1
CDH18-208ENST00000508350 CCDC88BA6NC98 1476 aa8.12□□□□□ -1.11
CDH18-208ENST00000508350 KCNA4P22459 653 aa8.09□□□□□ -1.11
CDH18-208ENST00000508350 CADPSQ9ULU8 1353 aa8.09□□□□□ -1.12
CDH18-208ENST00000508350 ERCC6Q03468 1493 aa8.06□□□□□ -1.12
CDH18-208ENST00000508350 LAMC3Q9Y6N6 1575 aa8.05□□□□□ -1.12
CDH18-208ENST00000508350 CFTRP13569 1480 aa8.04□□□□□ -1.12
CDH18-208ENST00000508350 KIF21AQ7Z4S6 1674 aa8.02□□□□□ -1.13
CDH18-208ENST00000508350 EHMT2Q96KQ7 1210 aa8.02□□□□□ -1.13
CDH18-208ENST00000508350 PDS5BQ9NTI5 1447 aa8.02□□□□□ -1.13
CDH18-208ENST00000508350 APLP2Q06481 763 aa8.01□□□□□ -1.13
CDH18-208ENST00000508350 FANCD2Q9BXW9 1451 aa8□□□□□ -1.13
CDH18-208ENST00000508350 U3KPZ7 1027 aaPredicted RBP7.98□□□□□ -1.13
CDH18-208ENST00000508350 CEP164Q9UPV0 1460 aa7.96□□□□□ -1.13
CDH18-208ENST00000508350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.96□□□□□ -1.14
CDH18-208ENST00000508350 HNRNPUL2Q1KMD3 747 aaKnown RBP7.96□□□□□ -1.14
CDH18-208ENST00000508350 THOC2Q8NI27 1593 aaKnown RBP7.96□□□□□ -1.14
CDH18-208ENST00000508350 PRDM2Q13029 1718 aa7.95□□□□□ -1.14
CDH18-208ENST00000508350 MRC2Q9UBG0 1479 aa7.94□□□□□ -1.14
CDH18-208ENST00000508350 URB2Q14146 1524 aaKnown RBP7.93□□□□□ -1.14
CDH18-208ENST00000508350 CAPN15O75808 1086 aa7.91□□□□□ -1.14
CDH18-208ENST00000508350 WDR62O43379 1518 aa7.9□□□□□ -1.14
CDH18-208ENST00000508350 CUX2O14529 1486 aa7.9□□□□□ -1.14
CDH18-208ENST00000508350 TOPBP1Q92547 1522 aa7.88□□□□□ -1.15
CDH18-208ENST00000508350 SLC4A2P04920 1241 aa7.87□□□□□ -1.15
CDH18-208ENST00000508350 CUX1P39880 1505 aa7.87□□□□□ -1.15
CDH18-208ENST00000508350 ABCC8Q09428 1581 aa7.86□□□□□ -1.15
CDH18-208ENST00000508350 SAMD1Q6SPF0 538 aaPredicted RBP7.86□□□□□ -1.15
CDH18-208ENST00000508350 DNMBPQ6XZF7 1577 aa7.85□□□□□ -1.15
CDH18-208ENST00000508350 ZNF219Q9P2Y4 722 aaPredicted RBP7.85□□□□□ -1.15
CDH18-208ENST00000508350 DSG3P32926 999 aa7.83□□□□□ -1.16
CDH18-208ENST00000508350 SPINK5Q9NQ38 1064 aaPredicted RBP7.83□□□□□ -1.16
CDH18-208ENST00000508350 RAD54L2Q9Y4B4 1467 aa7.82□□□□□ -1.16
CDH18-208ENST00000508350 SYNJ1O43426 1573 aa7.82□□□□□ -1.16
CDH18-208ENST00000508350 WRNQ14191 1432 aaPredicted RBP eCLIP7.82□□□□□ -1.16
CDH18-208ENST00000508350 POLA1P09884 1462 aaPredicted RBP7.81□□□□□ -1.16
CDH18-208ENST00000508350 FGD5Q6ZNL6 1462 aa7.81□□□□□ -1.16
CDH18-208ENST00000508350 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
CDH18-208ENST00000508350 SOGA1O94964 1423 aa7.79□□□□□ -1.16
CDH18-208ENST00000508350 IFT140Q96RY7 1462 aa7.79□□□□□ -1.16
CDH18-208ENST00000508350 TARBP1Q13395 1621 aaKnown RBP7.78□□□□□ -1.16
CDH18-208ENST00000508350 SLC4A1APQ9BWU0 796 aaKnown RBP7.78□□□□□ -1.16
CDH18-208ENST00000508350 TDRD9Q8NDG6 1382 aaKnown RBP7.78□□□□□ -1.16
CDH18-208ENST00000508350 TOP2BQ02880 1626 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms