RNA–Protein interactions for RNA: ENST00000508124.5

SLC38A9-215, Transcript of solute carrier family 38 member 9, humanhuman

TSL 2

Gene SLC38A9, Length 2,370 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-215ENST00000508124 AEBP2Q6ZN18 517 aaPredicted RBP13.45□□□□□ -0.26
SLC38A9-215ENST00000508124 CHIC1Q5VXU3 224 aa12.88□□□□□ -0.35
SLC38A9-215ENST00000508124 NISCHQ9Y2I1 1504 aa12.36□□□□□ -0.43
SLC38A9-215ENST00000508124 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
SLC38A9-215ENST00000508124 SENP3Q9H4L4 574 aaPredicted RBP11.33□□□□□ -0.6
SLC38A9-215ENST00000508124 ABCC9O60706 1549 aa10.73□□□□□ -0.69
SLC38A9-215ENST00000508124 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
SLC38A9-215ENST00000508124 CCDC180Q9P1Z9 1646 aa10.64□□□□□ -0.71
SLC38A9-215ENST00000508124 FOXD1Q16676 465 aa10.61□□□□□ -0.71
SLC38A9-215ENST00000508124 PLPPR3Q6T4P5 718 aa10.52□□□□□ -0.73
SLC38A9-215ENST00000508124 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
SLC38A9-215ENST00000508124 ZCCHC6Q5VYS8 1495 aaKnown RBP10.33□□□□□ -0.76
SLC38A9-215ENST00000508124 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
SLC38A9-215ENST00000508124 SCRIBQ14160 1630 aa10.2□□□□□ -0.78
SLC38A9-215ENST00000508124 PPP6R1Q9UPN7 881 aa10.1□□□□□ -0.79
SLC38A9-215ENST00000508124 UNC13AQ9UPW8 1703 aa10.05□□□□□ -0.8
SLC38A9-215ENST00000508124 ADRA2BP18089 450 aa10.05□□□□□ -0.8
SLC38A9-215ENST00000508124 RB1CC1Q8TDY2 1594 aa10□□□□□ -0.81
SLC38A9-215ENST00000508124 NACADO15069 1562 aa9.97□□□□□ -0.81
SLC38A9-215ENST00000508124 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
SLC38A9-215ENST00000508124 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
SLC38A9-215ENST00000508124 PIAS4Q8N2W9 510 aaPredicted RBP9.9□□□□□ -0.82
SLC38A9-215ENST00000508124 SUPT5HO00267 1087 aaKnown RBP9.89□□□□□ -0.83
SLC38A9-215ENST00000508124 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
SLC38A9-215ENST00000508124 DNAJC5BQ9UF47 199 aa9.86□□□□□ -0.83
SLC38A9-215ENST00000508124 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
SLC38A9-215ENST00000508124 MSH5O43196 834 aa9.78□□□□□ -0.84
SLC38A9-215ENST00000508124 MROH2BQ7Z745 1585 aa9.72□□□□□ -0.85
SLC38A9-215ENST00000508124 WIZO95785 1651 aa9.67□□□□□ -0.86
SLC38A9-215ENST00000508124 RSF1Q96T23 1441 aaPredicted RBP9.62□□□□□ -0.87
SLC38A9-215ENST00000508124 EIF4G1Q04637 1599 aaKnown RBP9.59□□□□□ -0.87
SLC38A9-215ENST00000508124 SMARCA4P51532 1647 aa9.57□□□□□ -0.88
SLC38A9-215ENST00000508124 CC2D2AQ9P2K1 1620 aa9.55□□□□□ -0.88
SLC38A9-215ENST00000508124 BAZ1AQ9NRL2 1556 aaPredicted RBP9.47□□□□□ -0.89
SLC38A9-215ENST00000508124 ATAD2BQ9ULI0 1458 aa9.46□□□□□ -0.89
SLC38A9-215ENST00000508124 NESP48681 1621 aa9.42□□□□□ -0.9
SLC38A9-215ENST00000508124 EHMT2Q96KQ7 1210 aa9.39□□□□□ -0.91
SLC38A9-215ENST00000508124 BAZ1BQ9UIG0 1483 aaKnown RBP9.39□□□□□ -0.91
SLC38A9-215ENST00000508124 CCDC88BA6NC98 1476 aa9.37□□□□□ -0.91
SLC38A9-215ENST00000508124 SMARCA2P51531 1590 aa9.33□□□□□ -0.92
SLC38A9-215ENST00000508124 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
SLC38A9-215ENST00000508124 POTEDQ86YR6 584 aa9.31□□□□□ -0.92
SLC38A9-215ENST00000508124 ABCC8Q09428 1581 aa9.3□□□□□ -0.92
SLC38A9-215ENST00000508124 PPP4R3CPQ6ZMV5 832 aa9.29□□□□□ -0.92
SLC38A9-215ENST00000508124 NCAPD3P42695 1498 aa9.28□□□□□ -0.92
SLC38A9-215ENST00000508124 PEG3Q9GZU2 1588 aa9.27□□□□□ -0.93
SLC38A9-215ENST00000508124 FAM9AQ8IZU1 332 aaPredicted RBP9.26□□□□□ -0.93
SLC38A9-215ENST00000508124 KCNA4P22459 653 aa9.23□□□□□ -0.93
SLC38A9-215ENST00000508124 HMGXB3Q12766 1538 aa9.21□□□□□ -0.94
SLC38A9-215ENST00000508124 MAPK8IP2Q13387 824 aaPredicted RBP9.2□□□□□ -0.94
SLC38A9-215ENST00000508124 KIF21AQ7Z4S6 1674 aa9.16□□□□□ -0.94
SLC38A9-215ENST00000508124 RUSC2Q8N2Y8 1516 aa9.12□□□□□ -0.95
SLC38A9-215ENST00000508124 SYNJ1O43426 1573 aa9.11□□□□□ -0.95
SLC38A9-215ENST00000508124 SCAF1Q9H7N4 1312 aaKnown RBP9.11□□□□□ -0.95
SLC38A9-215ENST00000508124 CADPSQ9ULU8 1353 aa9.11□□□□□ -0.95
SLC38A9-215ENST00000508124 LOC105371045A0A1W2PR82 267 aa9.09□□□□□ -0.95
SLC38A9-215ENST00000508124 NCBP3Q53F19 620 aaKnown RBP9.09□□□□□ -0.95
SLC38A9-215ENST00000508124 CFTRP13569 1480 aa9.09□□□□□ -0.95
SLC38A9-215ENST00000508124 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
SLC38A9-215ENST00000508124 TRIM41Q8WV44 630 aa9.07□□□□□ -0.96
SLC38A9-215ENST00000508124 RAD54L2Q9Y4B4 1467 aa9.07□□□□□ -0.96
SLC38A9-215ENST00000508124 RANGAP1P46060 587 aaPredicted RBP9.06□□□□□ -0.96
SLC38A9-215ENST00000508124 CUX1P39880 1505 aa9.06□□□□□ -0.96
SLC38A9-215ENST00000508124 SOGA1O94964 1423 aa9.05□□□□□ -0.96
SLC38A9-215ENST00000508124 ERCC6Q03468 1493 aa9.05□□□□□ -0.96
SLC38A9-215ENST00000508124 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
SLC38A9-215ENST00000508124 DMRT2Q9Y5R5 561 aa9.05□□□□□ -0.96
SLC38A9-215ENST00000508124 WRNQ14191 1432 aaPredicted RBP eCLIP9□□□□□ -0.97
SLC38A9-215ENST00000508124 CNKSR2Q8WXI2 1034 aa9□□□□□ -0.97
SLC38A9-215ENST00000508124 ZNF608Q9ULD9 1512 aaPredicted RBP8.99□□□□□ -0.97
SLC38A9-215ENST00000508124 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
SLC38A9-215ENST00000508124 CEP164Q9UPV0 1460 aa8.98□□□□□ -0.97
SLC38A9-215ENST00000508124 FGD5Q6ZNL6 1462 aa8.97□□□□□ -0.97
SLC38A9-215ENST00000508124 LAMC3Q9Y6N6 1575 aa8.96□□□□□ -0.97
SLC38A9-215ENST00000508124 TOPBP1Q92547 1522 aa8.96□□□□□ -0.98
SLC38A9-215ENST00000508124 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
SLC38A9-215ENST00000508124 AQRO60306 1485 aaKnown RBP eCLIP8.95□□□□□ -0.98
SLC38A9-215ENST00000508124 NPM3O75607 178 aaKnown RBP8.95□□□□□ -0.98
SLC38A9-215ENST00000508124 POLA1P09884 1462 aaPredicted RBP8.94□□□□□ -0.98
SLC38A9-215ENST00000508124 PRDM2Q13029 1718 aa8.93□□□□□ -0.98
SLC38A9-215ENST00000508124 CUX2O14529 1486 aa8.93□□□□□ -0.98
SLC38A9-215ENST00000508124 PDS5BQ9NTI5 1447 aa8.92□□□□□ -0.98
SLC38A9-215ENST00000508124 TTBK1Q5TCY1 1321 aaPredicted RBP8.9□□□□□ -0.98
SLC38A9-215ENST00000508124 MRC2Q9UBG0 1479 aa8.89□□□□□ -0.99
SLC38A9-215ENST00000508124 TOP2BQ02880 1626 aa8.89□□□□□ -0.99
SLC38A9-215ENST00000508124 FBLN2P98095 1184 aa8.88□□□□□ -0.99
SLC38A9-215ENST00000508124 PPARGC1BQ86YN6 1023 aaKnown RBP8.88□□□□□ -0.99
SLC38A9-215ENST00000508124 DNMBPQ6XZF7 1577 aa8.86□□□□□ -0.99
SLC38A9-215ENST00000508124 BIVM-ERCC5R4GMW8 1640 aa8.85□□□□□ -0.99
SLC38A9-215ENST00000508124 WDR62O43379 1518 aa8.84□□□□□ -0.99
SLC38A9-215ENST00000508124 SLC4A1APQ9BWU0 796 aaKnown RBP8.83□□□□□ -1
SLC38A9-215ENST00000508124 TARBP1Q13395 1621 aaKnown RBP8.83□□□□□ -1
SLC38A9-215ENST00000508124 P3H3Q8IVL6 736 aa8.83□□□□□ -1
SLC38A9-215ENST00000508124 RAPGEF2Q9Y4G8 1499 aa8.81□□□□□ -1
SLC38A9-215ENST00000508124 ARID3CA6NKF2 412 aa8.81□□□□□ -1
SLC38A9-215ENST00000508124 EIF4G3O43432 1585 aaKnown RBP8.8□□□□□ -1
SLC38A9-215ENST00000508124 HOXD11P31277 338 aaPredicted RBP8.8□□□□□ -1
SLC38A9-215ENST00000508124 RNF216Q9NWF9 866 aaPredicted RBP8.78□□□□□ -1
SLC38A9-215ENST00000508124 WDR97A6NE52 1622 aa8.77□□□□□ -1
SLC38A9-215ENST00000508124 IGF1RP08069 1367 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 200.6 ms