RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
KDM3B-204ENST00000507996 CHIC1Q5VXU3 224 aa11.91□□□□□ -0.5
KDM3B-204ENST00000507996 AEBP2Q6ZN18 517 aaPredicted RBP11.89□□□□□ -0.51
KDM3B-204ENST00000507996 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
KDM3B-204ENST00000507996 DCAF8L2P0C7V8 631 aa10.85□□□□□ -0.67
KDM3B-204ENST00000507996 ABCC9O60706 1549 aa10.74□□□□□ -0.69
KDM3B-204ENST00000507996 ZCCHC6Q5VYS8 1495 aaKnown RBP10.66□□□□□ -0.7
KDM3B-204ENST00000507996 PELP1Q8IZL8 1130 aaKnown RBP10.64□□□□□ -0.71
KDM3B-204ENST00000507996 PHF23Q9BUL5 403 aaPredicted RBP10.59□□□□□ -0.71
KDM3B-204ENST00000507996 SHROOM4Q9ULL8 1493 aa10.57□□□□□ -0.72
KDM3B-204ENST00000507996 DCAF1Q9Y4B6 1507 aa10.44□□□□□ -0.74
KDM3B-204ENST00000507996 HRCP23327 699 aa10.39□□□□□ -0.75
KDM3B-204ENST00000507996 MYT1Q01538 1121 aa10.39□□□□□ -0.75
KDM3B-204ENST00000507996 NACADO15069 1562 aa10.37□□□□□ -0.75
KDM3B-204ENST00000507996 RB1CC1Q8TDY2 1594 aa10.33□□□□□ -0.76
KDM3B-204ENST00000507996 SCRIBQ14160 1630 aa10.32□□□□□ -0.76
KDM3B-204ENST00000507996 MYO15BQ96JP2 1530 aa10.32□□□□□ -0.76
KDM3B-204ENST00000507996 PABPN1Q86U42 306 aaKnown RBP eCLIP10.18□□□□□ -0.78
KDM3B-204ENST00000507996 UNC13AQ9UPW8 1703 aa10.17□□□□□ -0.78
KDM3B-204ENST00000507996 SUPT5HO00267 1087 aaKnown RBP10.15□□□□□ -0.78
KDM3B-204ENST00000507996 BICRAQ9NZM4 1560 aa10.03□□□□□ -0.8
KDM3B-204ENST00000507996 CECR2Q9BXF3 1484 aa9.98□□□□□ -0.81
KDM3B-204ENST00000507996 TTBK1Q5TCY1 1321 aaPredicted RBP9.93□□□□□ -0.82
KDM3B-204ENST00000507996 SCAF1Q9H7N4 1312 aaKnown RBP9.93□□□□□ -0.82
KDM3B-204ENST00000507996 PPARGC1BQ86YN6 1023 aaKnown RBP9.92□□□□□ -0.82
KDM3B-204ENST00000507996 SENP3Q9H4L4 574 aaPredicted RBP9.9□□□□□ -0.82
KDM3B-204ENST00000507996 RSF1Q96T23 1441 aaPredicted RBP9.89□□□□□ -0.83
KDM3B-204ENST00000507996 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
KDM3B-204ENST00000507996 BAZ1AQ9NRL2 1556 aaPredicted RBP9.84□□□□□ -0.83
KDM3B-204ENST00000507996 PLPPR3Q6T4P5 718 aa9.82□□□□□ -0.84
KDM3B-204ENST00000507996 WIZO95785 1651 aa9.81□□□□□ -0.84
KDM3B-204ENST00000507996 SMARCA4P51532 1647 aa9.81□□□□□ -0.84
KDM3B-204ENST00000507996 PCGF6Q9BYE7 350 aa9.81□□□□□ -0.84
KDM3B-204ENST00000507996 EIF4G1Q04637 1599 aaKnown RBP9.74□□□□□ -0.85
KDM3B-204ENST00000507996 ZEB1P37275 1124 aaPredicted RBP9.74□□□□□ -0.85
KDM3B-204ENST00000507996 ATAD2BQ9ULI0 1458 aa9.69□□□□□ -0.86
KDM3B-204ENST00000507996 DNAJC5BQ9UF47 199 aa9.66□□□□□ -0.86
KDM3B-204ENST00000507996 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
KDM3B-204ENST00000507996 CC2D2AQ9P2K1 1620 aa9.66□□□□□ -0.86
KDM3B-204ENST00000507996 SMARCA2P51531 1590 aa9.65□□□□□ -0.86
KDM3B-204ENST00000507996 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
KDM3B-204ENST00000507996 TOP2AP11388 1531 aaKnown RBP9.64□□□□□ -0.87
KDM3B-204ENST00000507996 ACIN1Q9UKV3 1341 aaKnown RBP9.64□□□□□ -0.87
KDM3B-204ENST00000507996 PEG3Q9GZU2 1588 aa9.62□□□□□ -0.87
KDM3B-204ENST00000507996 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
KDM3B-204ENST00000507996 CCDC88BA6NC98 1476 aa9.6□□□□□ -0.87
KDM3B-204ENST00000507996 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
KDM3B-204ENST00000507996 HMGXB3Q12766 1538 aa9.54□□□□□ -0.88
KDM3B-204ENST00000507996 NEUROD1Q13562 356 aa9.5□□□□□ -0.89
KDM3B-204ENST00000507996 TRIM41Q8WV44 630 aa9.49□□□□□ -0.89
KDM3B-204ENST00000507996 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
KDM3B-204ENST00000507996 CENPBP07199 599 aaPredicted RBP9.46□□□□□ -0.9
KDM3B-204ENST00000507996 BCL11AQ9H165 835 aa9.43□□□□□ -0.9
KDM3B-204ENST00000507996 SLC24A1O60721 1099 aa9.42□□□□□ -0.9
KDM3B-204ENST00000507996 ABCC8Q09428 1581 aa9.42□□□□□ -0.9
KDM3B-204ENST00000507996 FAM9AQ8IZU1 332 aaPredicted RBP9.41□□□□□ -0.9
KDM3B-204ENST00000507996 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
KDM3B-204ENST00000507996 NESP48681 1621 aa9.39□□□□□ -0.91
KDM3B-204ENST00000507996 CFTRP13569 1480 aa9.37□□□□□ -0.91
KDM3B-204ENST00000507996 WRNQ14191 1432 aaPredicted RBP eCLIP9.34□□□□□ -0.91
KDM3B-204ENST00000507996 PRKCSHP14314 528 aaPredicted RBP9.31□□□□□ -0.92
KDM3B-204ENST00000507996 ADRA2BP18089 450 aa9.31□□□□□ -0.92
KDM3B-204ENST00000507996 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
KDM3B-204ENST00000507996 LOC105371045A0A1W2PR82 267 aa9.29□□□□□ -0.92
KDM3B-204ENST00000507996 ANP32EQ9BTT0 268 aa9.28□□□□□ -0.92
KDM3B-204ENST00000507996 SYNJ1O43426 1573 aa9.28□□□□□ -0.92
KDM3B-204ENST00000507996 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
KDM3B-204ENST00000507996 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
KDM3B-204ENST00000507996 CLSPNQ9HAW4 1339 aa9.26□□□□□ -0.93
KDM3B-204ENST00000507996 PRDM2Q13029 1718 aa9.24□□□□□ -0.93
KDM3B-204ENST00000507996 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
KDM3B-204ENST00000507996 ERICH6Q7L0X2 663 aa9.24□□□□□ -0.93
KDM3B-204ENST00000507996 SOGA1O94964 1423 aa9.24□□□□□ -0.93
KDM3B-204ENST00000507996 PPP6R1Q9UPN7 881 aa9.23□□□□□ -0.93
KDM3B-204ENST00000507996 CUX1P39880 1505 aa9.23□□□□□ -0.93
KDM3B-204ENST00000507996 DIEXFQ68CQ4 756 aaKnown RBP9.23□□□□□ -0.93
KDM3B-204ENST00000507996 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
KDM3B-204ENST00000507996 FOXD1Q16676 465 aa9.23□□□□□ -0.93
KDM3B-204ENST00000507996 ERCC6Q03468 1493 aa9.22□□□□□ -0.93
KDM3B-204ENST00000507996 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.94
KDM3B-204ENST00000507996 TOP2BQ02880 1626 aa9.2□□□□□ -0.94
KDM3B-204ENST00000507996 APLP2Q06481 763 aa9.2□□□□□ -0.94
KDM3B-204ENST00000507996 CSRNP3Q8WYN3 585 aa9.17□□□□□ -0.94
KDM3B-204ENST00000507996 BIVM-ERCC5R4GMW8 1640 aa9.17□□□□□ -0.94
KDM3B-204ENST00000507996 FGD5Q6ZNL6 1462 aa9.17□□□□□ -0.94
KDM3B-204ENST00000507996 URB2Q14146 1524 aaKnown RBP9.17□□□□□ -0.94
KDM3B-204ENST00000507996 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
KDM3B-204ENST00000507996 RAD54L2Q9Y4B4 1467 aa9.15□□□□□ -0.94
KDM3B-204ENST00000507996 DNMBPQ6XZF7 1577 aa9.14□□□□□ -0.95
KDM3B-204ENST00000507996 KCNA4P22459 653 aa9.14□□□□□ -0.95
KDM3B-204ENST00000507996 UBTFP17480 764 aaKnown RBP9.13□□□□□ -0.95
KDM3B-204ENST00000507996 CUX2O14529 1486 aa9.13□□□□□ -0.95
KDM3B-204ENST00000507996 POLA1P09884 1462 aaPredicted RBP9.13□□□□□ -0.95
KDM3B-204ENST00000507996 MRC2Q9UBG0 1479 aa9.12□□□□□ -0.95
KDM3B-204ENST00000507996 RANGAP1P46060 587 aaPredicted RBP9.12□□□□□ -0.95
KDM3B-204ENST00000507996 KIF27Q86VH2 1401 aa9.1□□□□□ -0.95
KDM3B-204ENST00000507996 THOC2Q8NI27 1593 aaKnown RBP9.1□□□□□ -0.95
KDM3B-204ENST00000507996 TDRD9Q8NDG6 1382 aaKnown RBP9.1□□□□□ -0.95
KDM3B-204ENST00000507996 EEA1Q15075 1411 aa9.1□□□□□ -0.95
KDM3B-204ENST00000507996 TSHZ2Q9NRE2 1034 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms