RNA–Protein interactions for RNA: ENST00000507080.5

GPM6A-211, Transcript of glycoprotein M6A, humanhuman

TSL 1 (best)

Gene GPM6A, Length 2,672 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-211ENST00000507080 AEBP2Q6ZN18 517 aaPredicted RBP12.34□□□□□ -0.43
GPM6A-211ENST00000507080 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
GPM6A-211ENST00000507080 POTEDQ86YR6 584 aa11.18□□□□□ -0.62
GPM6A-211ENST00000507080 SENP3Q9H4L4 574 aaPredicted RBP10.88□□□□□ -0.67
GPM6A-211ENST00000507080 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
GPM6A-211ENST00000507080 FOXD1Q16676 465 aa10.11□□□□□ -0.79
GPM6A-211ENST00000507080 NISCHQ9Y2I1 1504 aa10.04□□□□□ -0.8
GPM6A-211ENST00000507080 MSH5O43196 834 aa10□□□□□ -0.81
GPM6A-211ENST00000507080 PIAS4Q8N2W9 510 aaPredicted RBP9.26□□□□□ -0.93
GPM6A-211ENST00000507080 CACNB1Q02641 598 aaPredicted RBP9.06□□□□□ -0.96
GPM6A-211ENST00000507080 CCDC180Q9P1Z9 1646 aa8.95□□□□□ -0.98
GPM6A-211ENST00000507080 ABCC9O60706 1549 aa8.93□□□□□ -0.98
GPM6A-211ENST00000507080 PPP6R1Q9UPN7 881 aa8.64□□□□□ -1.03
GPM6A-211ENST00000507080 POTEHQ6S545 545 aa8.6□□□□□ -1.03
GPM6A-211ENST00000507080 ADRA2BP18089 450 aa8.58□□□□□ -1.04
GPM6A-211ENST00000507080 RB1CC1Q8TDY2 1594 aa8.5□□□□□ -1.05
GPM6A-211ENST00000507080 DCAF8L2P0C7V8 631 aa8.49□□□□□ -1.05
GPM6A-211ENST00000507080 NACADO15069 1562 aa8.46□□□□□ -1.06
GPM6A-211ENST00000507080 DMRT2Q9Y5R5 561 aa8.45□□□□□ -1.06
GPM6A-211ENST00000507080 PLPPR3Q6T4P5 718 aa8.38□□□□□ -1.07
GPM6A-211ENST00000507080 MYO15BQ96JP2 1530 aa8.36□□□□□ -1.07
GPM6A-211ENST00000507080 DNAJC5BQ9UF47 199 aa8.35□□□□□ -1.07
GPM6A-211ENST00000507080 PABPN1Q86U42 306 aaKnown RBP eCLIP8.35□□□□□ -1.07
GPM6A-211ENST00000507080 RNF39Q9H2S5 420 aa8.34□□□□□ -1.07
GPM6A-211ENST00000507080 ZCCHC6Q5VYS8 1495 aaKnown RBP8.33□□□□□ -1.08
GPM6A-211ENST00000507080 UNC13AQ9UPW8 1703 aa8.32□□□□□ -1.08
GPM6A-211ENST00000507080 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
GPM6A-211ENST00000507080 BICRAQ9NZM4 1560 aa8.27□□□□□ -1.09
GPM6A-211ENST00000507080 C1QBPQ07021 282 aaKnown RBP8.26□□□□□ -1.09
GPM6A-211ENST00000507080 SCRIBQ14160 1630 aa8.19□□□□□ -1.1
GPM6A-211ENST00000507080 MAPK8IP2Q13387 824 aaPredicted RBP8.13□□□□□ -1.11
GPM6A-211ENST00000507080 SHROOM4Q9ULL8 1493 aa8.12□□□□□ -1.11
GPM6A-211ENST00000507080 SCAF1Q9H7N4 1312 aaKnown RBP8.11□□□□□ -1.11
GPM6A-211ENST00000507080 CC2D2AQ9P2K1 1620 aa8.06□□□□□ -1.12
GPM6A-211ENST00000507080 DCAF8L1A6NGE4 600 aa8.06□□□□□ -1.12
GPM6A-211ENST00000507080 EIF4G1Q04637 1599 aaKnown RBP8.06□□□□□ -1.12
GPM6A-211ENST00000507080 CECR2Q9BXF3 1484 aa8.03□□□□□ -1.12
GPM6A-211ENST00000507080 NCAPD3P42695 1498 aa7.82□□□□□ -1.16
GPM6A-211ENST00000507080 ATAD2BQ9ULI0 1458 aa7.81□□□□□ -1.16
GPM6A-211ENST00000507080 SMARCA4P51532 1647 aa7.81□□□□□ -1.16
GPM6A-211ENST00000507080 HOXD11P31277 338 aaPredicted RBP7.78□□□□□ -1.16
GPM6A-211ENST00000507080 SMARCA2P51531 1590 aa7.77□□□□□ -1.16
GPM6A-211ENST00000507080 BAZ1AQ9NRL2 1556 aaPredicted RBP7.77□□□□□ -1.16
GPM6A-211ENST00000507080 HMGXB3Q12766 1538 aa7.75□□□□□ -1.17
GPM6A-211ENST00000507080 MROH2BQ7Z745 1585 aa7.74□□□□□ -1.17
GPM6A-211ENST00000507080 BAZ1BQ9UIG0 1483 aaKnown RBP7.73□□□□□ -1.17
GPM6A-211ENST00000507080 PEG3Q9GZU2 1588 aa7.73□□□□□ -1.17
GPM6A-211ENST00000507080 NESP48681 1621 aa7.7□□□□□ -1.18
GPM6A-211ENST00000507080 ERCC6Q03468 1493 aa7.7□□□□□ -1.18
GPM6A-211ENST00000507080 WIZO95785 1651 aa7.66□□□□□ -1.18
GPM6A-211ENST00000507080 SP7Q8TDD2 431 aaPredicted RBP7.65□□□□□ -1.18
GPM6A-211ENST00000507080 CUX2O14529 1486 aa7.64□□□□□ -1.19
GPM6A-211ENST00000507080 LAMC3Q9Y6N6 1575 aa7.62□□□□□ -1.19
GPM6A-211ENST00000507080 RSF1Q96T23 1441 aaPredicted RBP7.61□□□□□ -1.19
GPM6A-211ENST00000507080 DNAJC5Q9H3Z4 198 aa7.6□□□□□ -1.19
GPM6A-211ENST00000507080 CADPSQ9ULU8 1353 aa7.59□□□□□ -1.19
GPM6A-211ENST00000507080 KIF21AQ7Z4S6 1674 aa7.58□□□□□ -1.2
GPM6A-211ENST00000507080 PDS5BQ9NTI5 1447 aa7.58□□□□□ -1.2
GPM6A-211ENST00000507080 THOC2Q8NI27 1593 aaKnown RBP7.58□□□□□ -1.2
GPM6A-211ENST00000507080 TOP2AP11388 1531 aaKnown RBP7.54□□□□□ -1.2
GPM6A-211ENST00000507080 CFTRP13569 1480 aa7.52□□□□□ -1.21
GPM6A-211ENST00000507080 MRC2Q9UBG0 1479 aa7.51□□□□□ -1.21
GPM6A-211ENST00000507080 FANCD2Q9BXW9 1451 aa7.5□□□□□ -1.21
GPM6A-211ENST00000507080 CEP164Q9UPV0 1460 aa7.49□□□□□ -1.21
GPM6A-211ENST00000507080 WDR62O43379 1518 aa7.49□□□□□ -1.21
GPM6A-211ENST00000507080 RNF216Q9NWF9 866 aaPredicted RBP7.48□□□□□ -1.21
GPM6A-211ENST00000507080 CCDC88BA6NC98 1476 aa7.48□□□□□ -1.21
GPM6A-211ENST00000507080 DSG3P32926 999 aa7.47□□□□□ -1.21
GPM6A-211ENST00000507080 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
GPM6A-211ENST00000507080 URB2Q14146 1524 aaKnown RBP7.44□□□□□ -1.22
GPM6A-211ENST00000507080 PRDM2Q13029 1718 aa7.42□□□□□ -1.22
GPM6A-211ENST00000507080 CHRDL2Q6WN34 429 aa7.39□□□□□ -1.23
GPM6A-211ENST00000507080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.39□□□□□ -1.23
GPM6A-211ENST00000507080 TOPBP1Q92547 1522 aa7.37□□□□□ -1.23
GPM6A-211ENST00000507080 ZNF608Q9ULD9 1512 aaPredicted RBP7.35□□□□□ -1.23
GPM6A-211ENST00000507080 SUPT5HO00267 1087 aaKnown RBP7.34□□□□□ -1.23
GPM6A-211ENST00000507080 IFT140Q96RY7 1462 aa7.34□□□□□ -1.23
GPM6A-211ENST00000507080 ABCC8Q09428 1581 aa7.34□□□□□ -1.23
GPM6A-211ENST00000507080 OSCARQ8IYS5 282 aa7.34□□□□□ -1.24
GPM6A-211ENST00000507080 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
GPM6A-211ENST00000507080 CNKSR2Q8WXI2 1034 aa7.31□□□□□ -1.24
GPM6A-211ENST00000507080 RBM42Q9BTD8 480 aaKnown RBP7.31□□□□□ -1.24
GPM6A-211ENST00000507080 CAPN15O75808 1086 aa7.3□□□□□ -1.24
GPM6A-211ENST00000507080 TRIM41Q8WV44 630 aa7.3□□□□□ -1.24
GPM6A-211ENST00000507080 POLA1P09884 1462 aaPredicted RBP7.3□□□□□ -1.24
GPM6A-211ENST00000507080 TARBP1Q13395 1621 aaKnown RBP7.3□□□□□ -1.24
GPM6A-211ENST00000507080 EIF4G3O43432 1585 aaKnown RBP7.29□□□□□ -1.24
GPM6A-211ENST00000507080 AQRO60306 1485 aaKnown RBP eCLIP7.29□□□□□ -1.24
GPM6A-211ENST00000507080 RAD54L2Q9Y4B4 1467 aa7.28□□□□□ -1.24
GPM6A-211ENST00000507080 SOGA1O94964 1423 aa7.27□□□□□ -1.25
GPM6A-211ENST00000507080 CUX1P39880 1505 aa7.27□□□□□ -1.25
GPM6A-211ENST00000507080 FGD5Q6ZNL6 1462 aa7.26□□□□□ -1.25
GPM6A-211ENST00000507080 TDRD9Q8NDG6 1382 aaKnown RBP7.26□□□□□ -1.25
GPM6A-211ENST00000507080 FBLN2P98095 1184 aa7.24□□□□□ -1.25
GPM6A-211ENST00000507080 CHD1O14646 1710 aa7.23□□□□□ -1.25
GPM6A-211ENST00000507080 RIMBP3CA6NJZ7 1639 aa7.22□□□□□ -1.25
GPM6A-211ENST00000507080 RIMBP3BA6NNM3 1639 aa7.22□□□□□ -1.25
GPM6A-211ENST00000507080 RIMBP3Q9UFD9 1639 aa7.22□□□□□ -1.25
GPM6A-211ENST00000507080 SNAPC4Q5SXM2 1469 aa7.21□□□□□ -1.26
GPM6A-211ENST00000507080 ARHGEF11O15085 1522 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms