RNA–Protein interactions for RNA: ENST00000507025.1

PRDM8-205, Transcript of PR/SET domain 8, humanhuman

TSL 3

Gene PRDM8, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-205ENST00000507025 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
PRDM8-205ENST00000507025 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
PRDM8-205ENST00000507025 SENP3Q9H4L4 574 aaPredicted RBP20.23■□□□□ 0.83
PRDM8-205ENST00000507025 PHF23Q9BUL5 403 aaPredicted RBP19.93■□□□□ 0.78
PRDM8-205ENST00000507025 FOXD1Q16676 465 aa18.98■□□□□ 0.63
PRDM8-205ENST00000507025 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
PRDM8-205ENST00000507025 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
PRDM8-205ENST00000507025 MSH5O43196 834 aa17.88■□□□□ 0.45
PRDM8-205ENST00000507025 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
PRDM8-205ENST00000507025 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
PRDM8-205ENST00000507025 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
PRDM8-205ENST00000507025 ADRA2BP18089 450 aa17.25■□□□□ 0.35
PRDM8-205ENST00000507025 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
PRDM8-205ENST00000507025 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
PRDM8-205ENST00000507025 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
PRDM8-205ENST00000507025 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
PRDM8-205ENST00000507025 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
PRDM8-205ENST00000507025 ZCCHC6Q5VYS8 1495 aaKnown RBP15.55■□□□□ 0.08
PRDM8-205ENST00000507025 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
PRDM8-205ENST00000507025 ABCC9O60706 1549 aa15.42■□□□□ 0.06
PRDM8-205ENST00000507025 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
PRDM8-205ENST00000507025 RNF39Q9H2S5 420 aa15.28■□□□□ 0.04
PRDM8-205ENST00000507025 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
PRDM8-205ENST00000507025 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
PRDM8-205ENST00000507025 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
PRDM8-205ENST00000507025 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
PRDM8-205ENST00000507025 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
PRDM8-205ENST00000507025 NACADO15069 1562 aa15.11■□□□□ 0.01
PRDM8-205ENST00000507025 RB1CC1Q8TDY2 1594 aa15.01□□□□□ -0.01
PRDM8-205ENST00000507025 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
PRDM8-205ENST00000507025 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
PRDM8-205ENST00000507025 CNKSR2Q8WXI2 1034 aa14.94□□□□□ -0.02
PRDM8-205ENST00000507025 SCRIBQ14160 1630 aa14.9□□□□□ -0.02
PRDM8-205ENST00000507025 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
PRDM8-205ENST00000507025 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
PRDM8-205ENST00000507025 BICRAQ9NZM4 1560 aa14.55□□□□□ -0.08
PRDM8-205ENST00000507025 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
PRDM8-205ENST00000507025 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRDM8-205ENST00000507025 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
PRDM8-205ENST00000507025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.1
PRDM8-205ENST00000507025 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
PRDM8-205ENST00000507025 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
PRDM8-205ENST00000507025 BAZ1AQ9NRL2 1556 aaPredicted RBP14.32□□□□□ -0.12
PRDM8-205ENST00000507025 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
PRDM8-205ENST00000507025 SMARCA4P51532 1647 aa14.27□□□□□ -0.12
PRDM8-205ENST00000507025 POTEHQ6S545 545 aa14.26□□□□□ -0.13
PRDM8-205ENST00000507025 WIZO95785 1651 aa14.22□□□□□ -0.13
PRDM8-205ENST00000507025 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
PRDM8-205ENST00000507025 U3KPZ7 1027 aaPredicted RBP14.14□□□□□ -0.15
PRDM8-205ENST00000507025 DSG3P32926 999 aa14.13□□□□□ -0.15
PRDM8-205ENST00000507025 EIF4G1Q04637 1599 aaKnown RBP14.11□□□□□ -0.15
PRDM8-205ENST00000507025 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
PRDM8-205ENST00000507025 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
PRDM8-205ENST00000507025 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
PRDM8-205ENST00000507025 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
PRDM8-205ENST00000507025 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
PRDM8-205ENST00000507025 CAPN15O75808 1086 aa13.99□□□□□ -0.17
PRDM8-205ENST00000507025 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
PRDM8-205ENST00000507025 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
PRDM8-205ENST00000507025 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
PRDM8-205ENST00000507025 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
PRDM8-205ENST00000507025 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
PRDM8-205ENST00000507025 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
PRDM8-205ENST00000507025 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
PRDM8-205ENST00000507025 ABCB7O75027 752 aa13.65□□□□□ -0.22
PRDM8-205ENST00000507025 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
PRDM8-205ENST00000507025 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
PRDM8-205ENST00000507025 CFTRP13569 1480 aa13.61□□□□□ -0.23
PRDM8-205ENST00000507025 ABCC8Q09428 1581 aa13.61□□□□□ -0.23
PRDM8-205ENST00000507025 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
PRDM8-205ENST00000507025 APLP2Q06481 763 aa13.56□□□□□ -0.24
PRDM8-205ENST00000507025 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
PRDM8-205ENST00000507025 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
PRDM8-205ENST00000507025 NESP48681 1621 aa13.5□□□□□ -0.25
PRDM8-205ENST00000507025 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
PRDM8-205ENST00000507025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
PRDM8-205ENST00000507025 KCNA4P22459 653 aa13.47□□□□□ -0.25
PRDM8-205ENST00000507025 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
PRDM8-205ENST00000507025 SYNJ1O43426 1573 aa13.46□□□□□ -0.25
PRDM8-205ENST00000507025 FANCD2Q9BXW9 1451 aa13.45□□□□□ -0.26
PRDM8-205ENST00000507025 FAM9AQ8IZU1 332 aaPredicted RBP13.43□□□□□ -0.26
PRDM8-205ENST00000507025 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
PRDM8-205ENST00000507025 CUX1P39880 1505 aa13.41□□□□□ -0.26
PRDM8-205ENST00000507025 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
PRDM8-205ENST00000507025 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
PRDM8-205ENST00000507025 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
PRDM8-205ENST00000507025 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
PRDM8-205ENST00000507025 CEP164Q9UPV0 1460 aa13.37□□□□□ -0.27
PRDM8-205ENST00000507025 CHRDL2Q6WN34 429 aa13.36□□□□□ -0.27
PRDM8-205ENST00000507025 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
PRDM8-205ENST00000507025 SOGA1O94964 1423 aa13.34□□□□□ -0.27
PRDM8-205ENST00000507025 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
PRDM8-205ENST00000507025 RUSC2Q8N2Y8 1516 aa13.31□□□□□ -0.28
PRDM8-205ENST00000507025 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
PRDM8-205ENST00000507025 EEA1Q15075 1411 aa13.3□□□□□ -0.28
PRDM8-205ENST00000507025 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
PRDM8-205ENST00000507025 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
PRDM8-205ENST00000507025 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
PRDM8-205ENST00000507025 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
PRDM8-205ENST00000507025 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms