RNA–Protein interactions for RNA: ENST00000505441.1

GRAMD2B-205, Transcript of GRAM domain containing 2B, humanhuman

TSL 3

Gene GRAMD2B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-205ENST00000505441 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
GRAMD2B-205ENST00000505441 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
GRAMD2B-205ENST00000505441 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
GRAMD2B-205ENST00000505441 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
GRAMD2B-205ENST00000505441 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
GRAMD2B-205ENST00000505441 FOXD1Q16676 465 aa18.41■□□□□ 0.54
GRAMD2B-205ENST00000505441 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
GRAMD2B-205ENST00000505441 ABCC9O60706 1549 aa17.48■□□□□ 0.39
GRAMD2B-205ENST00000505441 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
GRAMD2B-205ENST00000505441 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
GRAMD2B-205ENST00000505441 MSH5O43196 834 aa17.23■□□□□ 0.35
GRAMD2B-205ENST00000505441 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
GRAMD2B-205ENST00000505441 ADRA2BP18089 450 aa17.19■□□□□ 0.34
GRAMD2B-205ENST00000505441 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
GRAMD2B-205ENST00000505441 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
GRAMD2B-205ENST00000505441 NACADO15069 1562 aa16.47■□□□□ 0.23
GRAMD2B-205ENST00000505441 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
GRAMD2B-205ENST00000505441 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
GRAMD2B-205ENST00000505441 PABPN1Q86U42 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
GRAMD2B-205ENST00000505441 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
GRAMD2B-205ENST00000505441 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
GRAMD2B-205ENST00000505441 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
GRAMD2B-205ENST00000505441 ZCCHC6Q5VYS8 1495 aaKnown RBP16.09■□□□□ 0.17
GRAMD2B-205ENST00000505441 DCAF1Q9Y4B6 1507 aa16.01■□□□□ 0.15
GRAMD2B-205ENST00000505441 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
GRAMD2B-205ENST00000505441 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
GRAMD2B-205ENST00000505441 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
GRAMD2B-205ENST00000505441 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
GRAMD2B-205ENST00000505441 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
GRAMD2B-205ENST00000505441 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
GRAMD2B-205ENST00000505441 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
GRAMD2B-205ENST00000505441 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
GRAMD2B-205ENST00000505441 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
GRAMD2B-205ENST00000505441 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
GRAMD2B-205ENST00000505441 ATAD2BQ9ULI0 1458 aa15.17■□□□□ 0.02
GRAMD2B-205ENST00000505441 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
GRAMD2B-205ENST00000505441 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
GRAMD2B-205ENST00000505441 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
GRAMD2B-205ENST00000505441 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
GRAMD2B-205ENST00000505441 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
GRAMD2B-205ENST00000505441 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
GRAMD2B-205ENST00000505441 ERCC6Q03468 1493 aa15.08■□□□□ 0
GRAMD2B-205ENST00000505441 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
GRAMD2B-205ENST00000505441 CUX2O14529 1486 aa15.05■□□□□ -0
GRAMD2B-205ENST00000505441 HOXD11P31277 338 aaPredicted RBP15.04■□□□□ -0
GRAMD2B-205ENST00000505441 NESP48681 1621 aa15.03■□□□□ -0
GRAMD2B-205ENST00000505441 BAZ1BQ9UIG0 1483 aaKnown RBP15.02■□□□□ -0
GRAMD2B-205ENST00000505441 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
GRAMD2B-205ENST00000505441 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
GRAMD2B-205ENST00000505441 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
GRAMD2B-205ENST00000505441 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
GRAMD2B-205ENST00000505441 THOC2Q8NI27 1593 aaKnown RBP14.86□□□□□ -0.03
GRAMD2B-205ENST00000505441 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
GRAMD2B-205ENST00000505441 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
GRAMD2B-205ENST00000505441 WIZO95785 1651 aa14.8□□□□□ -0.04
GRAMD2B-205ENST00000505441 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
GRAMD2B-205ENST00000505441 PDS5BQ9NTI5 1447 aa14.78□□□□□ -0.04
GRAMD2B-205ENST00000505441 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
GRAMD2B-205ENST00000505441 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
GRAMD2B-205ENST00000505441 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
GRAMD2B-205ENST00000505441 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
GRAMD2B-205ENST00000505441 WDR62O43379 1518 aa14.64□□□□□ -0.07
GRAMD2B-205ENST00000505441 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
GRAMD2B-205ENST00000505441 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
GRAMD2B-205ENST00000505441 CFTRP13569 1480 aa14.58□□□□□ -0.08
GRAMD2B-205ENST00000505441 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
GRAMD2B-205ENST00000505441 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
GRAMD2B-205ENST00000505441 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
GRAMD2B-205ENST00000505441 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
GRAMD2B-205ENST00000505441 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
GRAMD2B-205ENST00000505441 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
GRAMD2B-205ENST00000505441 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
GRAMD2B-205ENST00000505441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.1
GRAMD2B-205ENST00000505441 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
GRAMD2B-205ENST00000505441 ZNF608Q9ULD9 1512 aaPredicted RBP14.32□□□□□ -0.12
GRAMD2B-205ENST00000505441 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
GRAMD2B-205ENST00000505441 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
GRAMD2B-205ENST00000505441 KCNA4P22459 653 aa14.3□□□□□ -0.12
GRAMD2B-205ENST00000505441 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
GRAMD2B-205ENST00000505441 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
GRAMD2B-205ENST00000505441 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
GRAMD2B-205ENST00000505441 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
GRAMD2B-205ENST00000505441 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
GRAMD2B-205ENST00000505441 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
GRAMD2B-205ENST00000505441 TARBP1Q13395 1621 aaKnown RBP14.19□□□□□ -0.14
GRAMD2B-205ENST00000505441 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
GRAMD2B-205ENST00000505441 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
GRAMD2B-205ENST00000505441 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
GRAMD2B-205ENST00000505441 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
GRAMD2B-205ENST00000505441 CHD1O14646 1710 aa14.13□□□□□ -0.15
GRAMD2B-205ENST00000505441 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
GRAMD2B-205ENST00000505441 SOGA1O94964 1423 aa14.09□□□□□ -0.15
GRAMD2B-205ENST00000505441 FBLN2P98095 1184 aa14.08□□□□□ -0.16
GRAMD2B-205ENST00000505441 FGD5Q6ZNL6 1462 aa14.07□□□□□ -0.16
GRAMD2B-205ENST00000505441 CUX1P39880 1505 aa14.07□□□□□ -0.16
GRAMD2B-205ENST00000505441 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
GRAMD2B-205ENST00000505441 CYB5RLQ6IPT4 315 aa14.04□□□□□ -0.16
GRAMD2B-205ENST00000505441 SNAPC4Q5SXM2 1469 aa14.04□□□□□ -0.16
GRAMD2B-205ENST00000505441 ARAP1Q96P48 1450 aa14.02□□□□□ -0.16
GRAMD2B-205ENST00000505441 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms