RNA–Protein interactions for RNA: ENST00000504823.5

FAM200B-208, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 3

Gene FAM200B, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-208ENST00000504823 AEBP2Q6ZN18 517 aaPredicted RBP31.62■■■□□ 2.65
FAM200B-208ENST00000504823 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
FAM200B-208ENST00000504823 SENP3Q9H4L4 574 aaPredicted RBP26.91■■□□□ 1.9
FAM200B-208ENST00000504823 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
FAM200B-208ENST00000504823 NISCHQ9Y2I1 1504 aa25.09■■□□□ 1.61
FAM200B-208ENST00000504823 FOXD1Q16676 465 aa25.06■■□□□ 1.6
FAM200B-208ENST00000504823 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
FAM200B-208ENST00000504823 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
FAM200B-208ENST00000504823 ADRA2BP18089 450 aa23.56■■□□□ 1.36
FAM200B-208ENST00000504823 PIAS4Q8N2W9 510 aaPredicted RBP23.48■■□□□ 1.35
FAM200B-208ENST00000504823 MSH5O43196 834 aa23.35■■□□□ 1.33
FAM200B-208ENST00000504823 ABCC9O60706 1549 aa22.71■■□□□ 1.23
FAM200B-208ENST00000504823 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.22
FAM200B-208ENST00000504823 POTEDQ86YR6 584 aa22.39■■□□□ 1.17
FAM200B-208ENST00000504823 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
FAM200B-208ENST00000504823 MAPK8IP2Q13387 824 aaPredicted RBP21.56■■□□□ 1.04
FAM200B-208ENST00000504823 SCAF1Q9H7N4 1312 aaKnown RBP21.52■■□□□ 1.03
FAM200B-208ENST00000504823 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
FAM200B-208ENST00000504823 NACADO15069 1562 aa21.44■■□□□ 1.02
FAM200B-208ENST00000504823 DMRT2Q9Y5R5 561 aa21.39■■□□□ 1.01
FAM200B-208ENST00000504823 PPP4R3CPQ6ZMV5 832 aa21.3■■□□□ 1
FAM200B-208ENST00000504823 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
FAM200B-208ENST00000504823 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
FAM200B-208ENST00000504823 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
FAM200B-208ENST00000504823 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
FAM200B-208ENST00000504823 BICRAQ9NZM4 1560 aa21■□□□□ 0.95
FAM200B-208ENST00000504823 CNKSR2Q8WXI2 1034 aa20.84■□□□□ 0.93
FAM200B-208ENST00000504823 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
FAM200B-208ENST00000504823 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
FAM200B-208ENST00000504823 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
FAM200B-208ENST00000504823 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
FAM200B-208ENST00000504823 RNF216Q9NWF9 866 aaPredicted RBP20.59■□□□□ 0.89
FAM200B-208ENST00000504823 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
FAM200B-208ENST00000504823 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
FAM200B-208ENST00000504823 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
FAM200B-208ENST00000504823 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
FAM200B-208ENST00000504823 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
FAM200B-208ENST00000504823 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
FAM200B-208ENST00000504823 NPM3O75607 178 aaKnown RBP20.28■□□□□ 0.84
FAM200B-208ENST00000504823 KCNA4P22459 653 aa20.11■□□□□ 0.81
FAM200B-208ENST00000504823 RNF39Q9H2S5 420 aa19.96■□□□□ 0.79
FAM200B-208ENST00000504823 DNAJC5Q9H3Z4 198 aa19.92■□□□□ 0.78
FAM200B-208ENST00000504823 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
FAM200B-208ENST00000504823 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
FAM200B-208ENST00000504823 CUX2O14529 1486 aa19.75■□□□□ 0.75
FAM200B-208ENST00000504823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.74
FAM200B-208ENST00000504823 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
FAM200B-208ENST00000504823 C1QBPQ07021 282 aaKnown RBP19.65■□□□□ 0.74
FAM200B-208ENST00000504823 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
FAM200B-208ENST00000504823 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
FAM200B-208ENST00000504823 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
FAM200B-208ENST00000504823 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
FAM200B-208ENST00000504823 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
FAM200B-208ENST00000504823 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
FAM200B-208ENST00000504823 NESP48681 1621 aa19.46■□□□□ 0.71
FAM200B-208ENST00000504823 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
FAM200B-208ENST00000504823 THOC2Q8NI27 1593 aaKnown RBP19.38■□□□□ 0.69
FAM200B-208ENST00000504823 LAMC3Q9Y6N6 1575 aa19.38■□□□□ 0.69
FAM200B-208ENST00000504823 U3KPZ7 1027 aaPredicted RBP19.35■□□□□ 0.69
FAM200B-208ENST00000504823 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
FAM200B-208ENST00000504823 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
FAM200B-208ENST00000504823 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
FAM200B-208ENST00000504823 KIF21AQ7Z4S6 1674 aa19.23■□□□□ 0.67
FAM200B-208ENST00000504823 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
FAM200B-208ENST00000504823 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
FAM200B-208ENST00000504823 WDR62O43379 1518 aa19.08■□□□□ 0.64
FAM200B-208ENST00000504823 WIZO95785 1651 aa19.03■□□□□ 0.64
FAM200B-208ENST00000504823 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
FAM200B-208ENST00000504823 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
FAM200B-208ENST00000504823 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
FAM200B-208ENST00000504823 CAPN15O75808 1086 aa18.93■□□□□ 0.62
FAM200B-208ENST00000504823 CFTRP13569 1480 aa18.92■□□□□ 0.62
FAM200B-208ENST00000504823 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
FAM200B-208ENST00000504823 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
FAM200B-208ENST00000504823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
FAM200B-208ENST00000504823 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
FAM200B-208ENST00000504823 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
FAM200B-208ENST00000504823 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
FAM200B-208ENST00000504823 APLP2Q06481 763 aa18.78■□□□□ 0.6
FAM200B-208ENST00000504823 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
FAM200B-208ENST00000504823 DSG3P32926 999 aa18.77■□□□□ 0.6
FAM200B-208ENST00000504823 SAMD1Q6SPF0 538 aaPredicted RBP18.76■□□□□ 0.59
FAM200B-208ENST00000504823 OSCARQ8IYS5 282 aa18.75■□□□□ 0.59
FAM200B-208ENST00000504823 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
FAM200B-208ENST00000504823 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
FAM200B-208ENST00000504823 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
FAM200B-208ENST00000504823 FOXD4L1Q9NU39 408 aa18.68■□□□□ 0.58
FAM200B-208ENST00000504823 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
FAM200B-208ENST00000504823 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
FAM200B-208ENST00000504823 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
FAM200B-208ENST00000504823 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
FAM200B-208ENST00000504823 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
FAM200B-208ENST00000504823 RIMBP3CA6NJZ7 1639 aa18.54■□□□□ 0.56
FAM200B-208ENST00000504823 RIMBP3BA6NNM3 1639 aa18.54■□□□□ 0.56
FAM200B-208ENST00000504823 RIMBP3Q9UFD9 1639 aa18.54■□□□□ 0.56
FAM200B-208ENST00000504823 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
FAM200B-208ENST00000504823 ABCB7O75027 752 aa18.53■□□□□ 0.56
FAM200B-208ENST00000504823 ZBTB22O15209 634 aa18.51■□□□□ 0.55
FAM200B-208ENST00000504823 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
FAM200B-208ENST00000504823 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms