RNA–Protein interactions for RNA: ENST00000504496.5

KLHL3-205, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 1,832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-205ENST00000504496 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
KLHL3-205ENST00000504496 AEBP2Q6ZN18 517 aaPredicted RBP15.24■□□□□ 0.03
KLHL3-205ENST00000504496 CHIC1Q5VXU3 224 aa14.71□□□□□ -0.06
KLHL3-205ENST00000504496 NISCHQ9Y2I1 1504 aa14.41□□□□□ -0.1
KLHL3-205ENST00000504496 PHF23Q9BUL5 403 aaPredicted RBP12.97□□□□□ -0.33
KLHL3-205ENST00000504496 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
KLHL3-205ENST00000504496 CCDC180Q9P1Z9 1646 aa12.66□□□□□ -0.38
KLHL3-205ENST00000504496 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
KLHL3-205ENST00000504496 FOXD1Q16676 465 aa12.05□□□□□ -0.48
KLHL3-205ENST00000504496 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
KLHL3-205ENST00000504496 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.5
KLHL3-205ENST00000504496 POTEHQ6S545 545 aa11.93□□□□□ -0.5
KLHL3-205ENST00000504496 ABCC9O60706 1549 aa11.87□□□□□ -0.51
KLHL3-205ENST00000504496 MYO15BQ96JP2 1530 aa11.83□□□□□ -0.52
KLHL3-205ENST00000504496 SHROOM4Q9ULL8 1493 aa11.81□□□□□ -0.52
KLHL3-205ENST00000504496 DCAF8L2P0C7V8 631 aa11.74□□□□□ -0.53
KLHL3-205ENST00000504496 NACADO15069 1562 aa11.74□□□□□ -0.53
KLHL3-205ENST00000504496 RB1CC1Q8TDY2 1594 aa11.65□□□□□ -0.54
KLHL3-205ENST00000504496 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
KLHL3-205ENST00000504496 SCRIBQ14160 1630 aa11.57□□□□□ -0.56
KLHL3-205ENST00000504496 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
KLHL3-205ENST00000504496 ADRA2BP18089 450 aa11.47□□□□□ -0.57
KLHL3-205ENST00000504496 UNC13AQ9UPW8 1703 aa11.47□□□□□ -0.57
KLHL3-205ENST00000504496 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
KLHL3-205ENST00000504496 BICRAQ9NZM4 1560 aa11.3□□□□□ -0.6
KLHL3-205ENST00000504496 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
KLHL3-205ENST00000504496 HRCP23327 699 aa11.23□□□□□ -0.61
KLHL3-205ENST00000504496 MSH5O43196 834 aa11.16□□□□□ -0.62
KLHL3-205ENST00000504496 CECR2Q9BXF3 1484 aa11.16□□□□□ -0.62
KLHL3-205ENST00000504496 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
KLHL3-205ENST00000504496 BAZ1AQ9NRL2 1556 aaPredicted RBP11.15□□□□□ -0.62
KLHL3-205ENST00000504496 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
KLHL3-205ENST00000504496 RSF1Q96T23 1441 aaPredicted RBP11.14□□□□□ -0.63
KLHL3-205ENST00000504496 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
KLHL3-205ENST00000504496 MROH2BQ7Z745 1585 aa11.12□□□□□ -0.63
KLHL3-205ENST00000504496 SMARCA4P51532 1647 aa11.11□□□□□ -0.63
KLHL3-205ENST00000504496 WIZO95785 1651 aa11.05□□□□□ -0.64
KLHL3-205ENST00000504496 LOC105371045A0A1W2PR82 267 aa11.01□□□□□ -0.65
KLHL3-205ENST00000504496 KCNA4P22459 653 aa11□□□□□ -0.65
KLHL3-205ENST00000504496 PPARGC1BQ86YN6 1023 aaKnown RBP11□□□□□ -0.65
KLHL3-205ENST00000504496 PEG3Q9GZU2 1588 aa11□□□□□ -0.65
KLHL3-205ENST00000504496 EIF4G1Q04637 1599 aaKnown RBP10.95□□□□□ -0.66
KLHL3-205ENST00000504496 TOP2AP11388 1531 aaKnown RBP10.95□□□□□ -0.66
KLHL3-205ENST00000504496 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
KLHL3-205ENST00000504496 SMARCA2P51531 1590 aa10.92□□□□□ -0.66
KLHL3-205ENST00000504496 TRIM26Q12899 539 aaPredicted RBP10.9□□□□□ -0.66
KLHL3-205ENST00000504496 ATAD2BQ9ULI0 1458 aa10.89□□□□□ -0.67
KLHL3-205ENST00000504496 HMGXB3Q12766 1538 aa10.84□□□□□ -0.67
KLHL3-205ENST00000504496 BAZ1BQ9UIG0 1483 aaKnown RBP10.83□□□□□ -0.68
KLHL3-205ENST00000504496 NCAPD3P42695 1498 aa10.81□□□□□ -0.68
KLHL3-205ENST00000504496 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
KLHL3-205ENST00000504496 CC2D2AQ9P2K1 1620 aa10.79□□□□□ -0.68
KLHL3-205ENST00000504496 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
KLHL3-205ENST00000504496 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
KLHL3-205ENST00000504496 ZEB1P37275 1124 aaPredicted RBP10.74□□□□□ -0.69
KLHL3-205ENST00000504496 PPP4R3CPQ6ZMV5 832 aa10.62□□□□□ -0.71
KLHL3-205ENST00000504496 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
KLHL3-205ENST00000504496 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
KLHL3-205ENST00000504496 CFTRP13569 1480 aa10.56□□□□□ -0.72
KLHL3-205ENST00000504496 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
KLHL3-205ENST00000504496 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
KLHL3-205ENST00000504496 SLC4A1APQ9BWU0 796 aaKnown RBP10.49□□□□□ -0.73
KLHL3-205ENST00000504496 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
KLHL3-205ENST00000504496 SYNJ1O43426 1573 aa10.49□□□□□ -0.73
KLHL3-205ENST00000504496 LAMC3Q9Y6N6 1575 aa10.48□□□□□ -0.73
KLHL3-205ENST00000504496 SCAF1Q9H7N4 1312 aaKnown RBP10.47□□□□□ -0.73
KLHL3-205ENST00000504496 BIVM-ERCC5R4GMW8 1640 aa10.47□□□□□ -0.73
KLHL3-205ENST00000504496 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
KLHL3-205ENST00000504496 TOP2BQ02880 1626 aa10.46□□□□□ -0.74
KLHL3-205ENST00000504496 CCER1Q8TC90 406 aaPredicted RBP10.46□□□□□ -0.74
KLHL3-205ENST00000504496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.44□□□□□ -0.74
KLHL3-205ENST00000504496 DNAJC5BQ9UF47 199 aa10.42□□□□□ -0.74
KLHL3-205ENST00000504496 NESP48681 1621 aa10.42□□□□□ -0.74
KLHL3-205ENST00000504496 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
KLHL3-205ENST00000504496 CUX1P39880 1505 aa10.41□□□□□ -0.74
KLHL3-205ENST00000504496 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
KLHL3-205ENST00000504496 TTBK1Q5TCY1 1321 aaPredicted RBP10.39□□□□□ -0.75
KLHL3-205ENST00000504496 NCBP3Q53F19 620 aaKnown RBP10.38□□□□□ -0.75
KLHL3-205ENST00000504496 CEP162Q5TB80 1403 aa10.38□□□□□ -0.75
KLHL3-205ENST00000504496 KIF21AQ7Z4S6 1674 aa10.37□□□□□ -0.75
KLHL3-205ENST00000504496 CEP164Q9UPV0 1460 aa10.35□□□□□ -0.75
KLHL3-205ENST00000504496 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
KLHL3-205ENST00000504496 EEA1Q15075 1411 aa10.35□□□□□ -0.75
KLHL3-205ENST00000504496 PDS5BQ9NTI5 1447 aa10.35□□□□□ -0.75
KLHL3-205ENST00000504496 SOGA1O94964 1423 aa10.34□□□□□ -0.75
KLHL3-205ENST00000504496 TNIKQ9UKE5 1360 aa10.33□□□□□ -0.76
KLHL3-205ENST00000504496 ACIN1Q9UKV3 1341 aaKnown RBP10.31□□□□□ -0.76
KLHL3-205ENST00000504496 DIEXFQ68CQ4 756 aaKnown RBP10.3□□□□□ -0.76
KLHL3-205ENST00000504496 TOPBP1Q92547 1522 aa10.3□□□□□ -0.76
KLHL3-205ENST00000504496 NPM3O75607 178 aaKnown RBP10.3□□□□□ -0.76
KLHL3-205ENST00000504496 DMRT2Q9Y5R5 561 aa10.3□□□□□ -0.76
KLHL3-205ENST00000504496 UBTFP17480 764 aaKnown RBP10.29□□□□□ -0.76
KLHL3-205ENST00000504496 FGD5Q6ZNL6 1462 aa10.29□□□□□ -0.76
KLHL3-205ENST00000504496 URB2Q14146 1524 aaKnown RBP10.29□□□□□ -0.76
KLHL3-205ENST00000504496 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
KLHL3-205ENST00000504496 GOLGA3Q08378 1498 aa10.28□□□□□ -0.76
KLHL3-205ENST00000504496 CNKSR2Q8WXI2 1034 aa10.28□□□□□ -0.76
KLHL3-205ENST00000504496 CENPBP07199 599 aaPredicted RBP10.27□□□□□ -0.77
KLHL3-205ENST00000504496 NEUROD1Q13562 356 aa10.27□□□□□ -0.77
KLHL3-205ENST00000504496 KIF21BO75037 1637 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms