RNA–Protein interactions for RNA: ENST00000504467.5

LVRN-205, Transcript of laeverin, humanhuman

TSL 1 (best)

Gene LVRN, Length 3,322 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LVRN-205ENST00000504467 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
LVRN-205ENST00000504467 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
LVRN-205ENST00000504467 DCAF8L2P0C7V8 631 aa20.6■□□□□ 0.89
LVRN-205ENST00000504467 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
LVRN-205ENST00000504467 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
LVRN-205ENST00000504467 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
LVRN-205ENST00000504467 ABCC9O60706 1549 aa19.35■□□□□ 0.69
LVRN-205ENST00000504467 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
LVRN-205ENST00000504467 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
LVRN-205ENST00000504467 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
LVRN-205ENST00000504467 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
LVRN-205ENST00000504467 LOC105371045A0A1W2PR82 267 aa18.95■□□□□ 0.62
LVRN-205ENST00000504467 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
LVRN-205ENST00000504467 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
LVRN-205ENST00000504467 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
LVRN-205ENST00000504467 PPARGC1BQ86YN6 1023 aaKnown RBP18.81■□□□□ 0.6
LVRN-205ENST00000504467 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
LVRN-205ENST00000504467 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
LVRN-205ENST00000504467 HRCP23327 699 aa18.73■□□□□ 0.59
LVRN-205ENST00000504467 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
LVRN-205ENST00000504467 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
LVRN-205ENST00000504467 NACADO15069 1562 aa18.62■□□□□ 0.57
LVRN-205ENST00000504467 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
LVRN-205ENST00000504467 MROH2BQ7Z745 1585 aa18.54■□□□□ 0.56
LVRN-205ENST00000504467 WIZO95785 1651 aa18.42■□□□□ 0.54
LVRN-205ENST00000504467 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
LVRN-205ENST00000504467 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
LVRN-205ENST00000504467 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
LVRN-205ENST00000504467 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
LVRN-205ENST00000504467 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
LVRN-205ENST00000504467 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
LVRN-205ENST00000504467 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
LVRN-205ENST00000504467 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
LVRN-205ENST00000504467 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
LVRN-205ENST00000504467 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
LVRN-205ENST00000504467 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
LVRN-205ENST00000504467 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
LVRN-205ENST00000504467 SOGA1O94964 1423 aa17.89■□□□□ 0.45
LVRN-205ENST00000504467 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.45
LVRN-205ENST00000504467 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
LVRN-205ENST00000504467 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
LVRN-205ENST00000504467 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
LVRN-205ENST00000504467 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
LVRN-205ENST00000504467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
LVRN-205ENST00000504467 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
LVRN-205ENST00000504467 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
LVRN-205ENST00000504467 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
LVRN-205ENST00000504467 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
LVRN-205ENST00000504467 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
LVRN-205ENST00000504467 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
LVRN-205ENST00000504467 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
LVRN-205ENST00000504467 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
LVRN-205ENST00000504467 TNIKQ9UKE5 1360 aa17.47■□□□□ 0.39
LVRN-205ENST00000504467 GOLGA3Q08378 1498 aa17.42■□□□□ 0.38
LVRN-205ENST00000504467 APLP2Q06481 763 aa17.4■□□□□ 0.38
LVRN-205ENST00000504467 RAPGEF2Q9Y4G8 1499 aa17.39■□□□□ 0.37
LVRN-205ENST00000504467 EEA1Q15075 1411 aa17.37■□□□□ 0.37
LVRN-205ENST00000504467 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
LVRN-205ENST00000504467 CLIP1P30622 1438 aa17.35■□□□□ 0.37
LVRN-205ENST00000504467 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
LVRN-205ENST00000504467 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
LVRN-205ENST00000504467 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
LVRN-205ENST00000504467 YTHDC1Q96MU7 727 aaKnown RBP17.27■□□□□ 0.35
LVRN-205ENST00000504467 ATP1B4Q9UN42 357 aaPredicted RBP17.26■□□□□ 0.35
LVRN-205ENST00000504467 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
LVRN-205ENST00000504467 DIEXFQ68CQ4 756 aaKnown RBP17.24■□□□□ 0.35
LVRN-205ENST00000504467 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
LVRN-205ENST00000504467 ITGAEP38570 1179 aa17.23■□□□□ 0.35
LVRN-205ENST00000504467 CUX1P39880 1505 aa17.23■□□□□ 0.35
LVRN-205ENST00000504467 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
LVRN-205ENST00000504467 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
LVRN-205ENST00000504467 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
LVRN-205ENST00000504467 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
LVRN-205ENST00000504467 CFTRP13569 1480 aa17.17■□□□□ 0.34
LVRN-205ENST00000504467 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
LVRN-205ENST00000504467 CC2D2AQ9P2K1 1620 aa17.15■□□□□ 0.34
LVRN-205ENST00000504467 KIF27Q86VH2 1401 aa17.14■□□□□ 0.33
LVRN-205ENST00000504467 CUX2O14529 1486 aa17.13■□□□□ 0.33
LVRN-205ENST00000504467 NESP48681 1621 aa17.13■□□□□ 0.33
LVRN-205ENST00000504467 VPS8Q8N3P4 1428 aa17.12■□□□□ 0.33
LVRN-205ENST00000504467 KIF21BO75037 1637 aa17.11■□□□□ 0.33
LVRN-205ENST00000504467 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
LVRN-205ENST00000504467 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
LVRN-205ENST00000504467 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
LVRN-205ENST00000504467 IGF1RP08069 1367 aa17.03■□□□□ 0.32
LVRN-205ENST00000504467 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
LVRN-205ENST00000504467 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
LVRN-205ENST00000504467 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
LVRN-205ENST00000504467 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
LVRN-205ENST00000504467 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
LVRN-205ENST00000504467 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
LVRN-205ENST00000504467 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
LVRN-205ENST00000504467 MIER1Q8N108 512 aa16.92■□□□□ 0.3
LVRN-205ENST00000504467 ARID3CA6NKF2 412 aa16.91■□□□□ 0.3
LVRN-205ENST00000504467 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
LVRN-205ENST00000504467 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
LVRN-205ENST00000504467 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.29
LVRN-205ENST00000504467 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
LVRN-205ENST00000504467 POLA1P09884 1462 aaPredicted RBP16.82■□□□□ 0.28
LVRN-205ENST00000504467 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms