RNA–Protein interactions for RNA: ENST00000498382.5

CNIH3-214, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 2

Gene CNIH3, Length 897 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-214ENST00000498382 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
CNIH3-214ENST00000498382 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
CNIH3-214ENST00000498382 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
CNIH3-214ENST00000498382 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
CNIH3-214ENST00000498382 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
CNIH3-214ENST00000498382 FOXD1Q16676 465 aa17.59■□□□□ 0.41
CNIH3-214ENST00000498382 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
CNIH3-214ENST00000498382 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
CNIH3-214ENST00000498382 ADRA2BP18089 450 aa16.84■□□□□ 0.29
CNIH3-214ENST00000498382 PIAS4Q8N2W9 510 aaPredicted RBP16.49■□□□□ 0.23
CNIH3-214ENST00000498382 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
CNIH3-214ENST00000498382 MSH5O43196 834 aa16.16■□□□□ 0.18
CNIH3-214ENST00000498382 ABCC9O60706 1549 aa15.91■□□□□ 0.14
CNIH3-214ENST00000498382 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
CNIH3-214ENST00000498382 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
CNIH3-214ENST00000498382 MAPK8IP2Q13387 824 aaPredicted RBP15.34■□□□□ 0.05
CNIH3-214ENST00000498382 NACADO15069 1562 aa15.32■□□□□ 0.04
CNIH3-214ENST00000498382 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
CNIH3-214ENST00000498382 DCAF8L2P0C7V8 631 aa15.3■□□□□ 0.04
CNIH3-214ENST00000498382 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
CNIH3-214ENST00000498382 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
CNIH3-214ENST00000498382 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
CNIH3-214ENST00000498382 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
CNIH3-214ENST00000498382 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
CNIH3-214ENST00000498382 KCNA4P22459 653 aa14.99□□□□□ -0.01
CNIH3-214ENST00000498382 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
CNIH3-214ENST00000498382 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
CNIH3-214ENST00000498382 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
CNIH3-214ENST00000498382 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
CNIH3-214ENST00000498382 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
CNIH3-214ENST00000498382 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
CNIH3-214ENST00000498382 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
CNIH3-214ENST00000498382 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
CNIH3-214ENST00000498382 RNF216Q9NWF9 866 aaPredicted RBP14.74□□□□□ -0.05
CNIH3-214ENST00000498382 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
CNIH3-214ENST00000498382 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
CNIH3-214ENST00000498382 EIF4G1Q04637 1599 aaKnown RBP14.48□□□□□ -0.09
CNIH3-214ENST00000498382 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
CNIH3-214ENST00000498382 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
CNIH3-214ENST00000498382 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
CNIH3-214ENST00000498382 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
CNIH3-214ENST00000498382 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
CNIH3-214ENST00000498382 MROH2BQ7Z745 1585 aa14.27□□□□□ -0.12
CNIH3-214ENST00000498382 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
CNIH3-214ENST00000498382 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
CNIH3-214ENST00000498382 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
CNIH3-214ENST00000498382 WIZO95785 1651 aa14.15□□□□□ -0.14
CNIH3-214ENST00000498382 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
CNIH3-214ENST00000498382 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
CNIH3-214ENST00000498382 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
CNIH3-214ENST00000498382 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
CNIH3-214ENST00000498382 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
CNIH3-214ENST00000498382 SLC4A2P04920 1241 aa14.04□□□□□ -0.16
CNIH3-214ENST00000498382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.17
CNIH3-214ENST00000498382 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
CNIH3-214ENST00000498382 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
CNIH3-214ENST00000498382 NESP48681 1621 aa13.83□□□□□ -0.2
CNIH3-214ENST00000498382 ZBTB22O15209 634 aa13.83□□□□□ -0.2
CNIH3-214ENST00000498382 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
CNIH3-214ENST00000498382 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
CNIH3-214ENST00000498382 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
CNIH3-214ENST00000498382 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
CNIH3-214ENST00000498382 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
CNIH3-214ENST00000498382 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
CNIH3-214ENST00000498382 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
CNIH3-214ENST00000498382 C1QBPQ07021 282 aaKnown RBP13.69□□□□□ -0.22
CNIH3-214ENST00000498382 CFTRP13569 1480 aa13.68□□□□□ -0.22
CNIH3-214ENST00000498382 PRDM2Q13029 1718 aa13.68□□□□□ -0.22
CNIH3-214ENST00000498382 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
CNIH3-214ENST00000498382 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
CNIH3-214ENST00000498382 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
CNIH3-214ENST00000498382 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
CNIH3-214ENST00000498382 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
CNIH3-214ENST00000498382 PDS5BQ9NTI5 1447 aa13.6□□□□□ -0.23
CNIH3-214ENST00000498382 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
CNIH3-214ENST00000498382 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
CNIH3-214ENST00000498382 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
CNIH3-214ENST00000498382 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
CNIH3-214ENST00000498382 WDR62O43379 1518 aa13.49□□□□□ -0.25
CNIH3-214ENST00000498382 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
CNIH3-214ENST00000498382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
CNIH3-214ENST00000498382 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
CNIH3-214ENST00000498382 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
CNIH3-214ENST00000498382 CUX2O14529 1486 aa13.46□□□□□ -0.25
CNIH3-214ENST00000498382 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
CNIH3-214ENST00000498382 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
CNIH3-214ENST00000498382 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
CNIH3-214ENST00000498382 CUX1P39880 1505 aa13.38□□□□□ -0.27
CNIH3-214ENST00000498382 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
CNIH3-214ENST00000498382 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
CNIH3-214ENST00000498382 CAPN15O75808 1086 aa13.34□□□□□ -0.27
CNIH3-214ENST00000498382 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
CNIH3-214ENST00000498382 APLP2Q06481 763 aa13.32□□□□□ -0.28
CNIH3-214ENST00000498382 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
CNIH3-214ENST00000498382 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
CNIH3-214ENST00000498382 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
CNIH3-214ENST00000498382 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
CNIH3-214ENST00000498382 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
CNIH3-214ENST00000498382 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
CNIH3-214ENST00000498382 WRNQ14191 1432 aaPredicted RBP eCLIP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms