RNA–Protein interactions for RNA: ENST00000498047.1

DCLK3-202, Transcript of doublecortin like kinase 3, humanhuman

TSL 3

Gene DCLK3, Length 280 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-202ENST00000498047 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
DCLK3-202ENST00000498047 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.2
DCLK3-202ENST00000498047 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
DCLK3-202ENST00000498047 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
DCLK3-202ENST00000498047 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
DCLK3-202ENST00000498047 SUPT5HO00267 1087 aaKnown RBP15.52■□□□□ 0.08
DCLK3-202ENST00000498047 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
DCLK3-202ENST00000498047 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
DCLK3-202ENST00000498047 ABCC9O60706 1549 aa15.26■□□□□ 0.03
DCLK3-202ENST00000498047 HRCP23327 699 aa15.25■□□□□ 0.03
DCLK3-202ENST00000498047 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
DCLK3-202ENST00000498047 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
DCLK3-202ENST00000498047 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
DCLK3-202ENST00000498047 NACADO15069 1562 aa14.94□□□□□ -0.02
DCLK3-202ENST00000498047 PCGF6Q9BYE7 350 aa14.89□□□□□ -0.03
DCLK3-202ENST00000498047 SCRIBQ14160 1630 aa14.87□□□□□ -0.03
DCLK3-202ENST00000498047 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
DCLK3-202ENST00000498047 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
DCLK3-202ENST00000498047 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
DCLK3-202ENST00000498047 LOC105371045A0A1W2PR82 267 aa14.71□□□□□ -0.05
DCLK3-202ENST00000498047 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
DCLK3-202ENST00000498047 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
DCLK3-202ENST00000498047 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
DCLK3-202ENST00000498047 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
DCLK3-202ENST00000498047 CECR2Q9BXF3 1484 aa14.55□□□□□ -0.08
DCLK3-202ENST00000498047 PPARGC1BQ86YN6 1023 aaKnown RBP14.54□□□□□ -0.08
DCLK3-202ENST00000498047 WIZO95785 1651 aa14.51□□□□□ -0.09
DCLK3-202ENST00000498047 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
DCLK3-202ENST00000498047 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
DCLK3-202ENST00000498047 EEA1Q15075 1411 aa14.41□□□□□ -0.1
DCLK3-202ENST00000498047 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
DCLK3-202ENST00000498047 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
DCLK3-202ENST00000498047 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
DCLK3-202ENST00000498047 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
DCLK3-202ENST00000498047 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
DCLK3-202ENST00000498047 TNIKQ9UKE5 1360 aa14.26□□□□□ -0.13
DCLK3-202ENST00000498047 UNC13AQ9UPW8 1703 aa14.26□□□□□ -0.13
DCLK3-202ENST00000498047 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
DCLK3-202ENST00000498047 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
DCLK3-202ENST00000498047 GOLGA3Q08378 1498 aa14.16□□□□□ -0.14
DCLK3-202ENST00000498047 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
DCLK3-202ENST00000498047 KIF21BO75037 1637 aa14.15□□□□□ -0.14
DCLK3-202ENST00000498047 BAZ1BQ9UIG0 1483 aaKnown RBP14.09□□□□□ -0.15
DCLK3-202ENST00000498047 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
DCLK3-202ENST00000498047 CEP164Q9UPV0 1460 aa14.08□□□□□ -0.16
DCLK3-202ENST00000498047 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
DCLK3-202ENST00000498047 SOGA1O94964 1423 aa14.06□□□□□ -0.16
DCLK3-202ENST00000498047 CCER1Q8TC90 406 aaPredicted RBP14.04□□□□□ -0.16
DCLK3-202ENST00000498047 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
DCLK3-202ENST00000498047 SYNJ1O43426 1573 aa13.96□□□□□ -0.17
DCLK3-202ENST00000498047 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.17
DCLK3-202ENST00000498047 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
DCLK3-202ENST00000498047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
DCLK3-202ENST00000498047 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
DCLK3-202ENST00000498047 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
DCLK3-202ENST00000498047 ERICH3Q5RHP9 1530 aa13.92□□□□□ -0.18
DCLK3-202ENST00000498047 RUSC2Q8N2Y8 1516 aa13.92□□□□□ -0.18
DCLK3-202ENST00000498047 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
DCLK3-202ENST00000498047 TOP2BQ02880 1626 aa13.91□□□□□ -0.18
DCLK3-202ENST00000498047 DIEXFQ68CQ4 756 aaKnown RBP13.9□□□□□ -0.18
DCLK3-202ENST00000498047 CLIP1P30622 1438 aa13.9□□□□□ -0.19
DCLK3-202ENST00000498047 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
DCLK3-202ENST00000498047 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
DCLK3-202ENST00000498047 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
DCLK3-202ENST00000498047 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
DCLK3-202ENST00000498047 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
DCLK3-202ENST00000498047 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
DCLK3-202ENST00000498047 MYT1Q01538 1121 aa13.78□□□□□ -0.2
DCLK3-202ENST00000498047 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.21
DCLK3-202ENST00000498047 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
DCLK3-202ENST00000498047 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
DCLK3-202ENST00000498047 CUX2O14529 1486 aa13.73□□□□□ -0.21
DCLK3-202ENST00000498047 APLP2Q06481 763 aa13.71□□□□□ -0.21
DCLK3-202ENST00000498047 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
DCLK3-202ENST00000498047 RRBP1Q9P2E9 1410 aaKnown RBP13.69□□□□□ -0.22
DCLK3-202ENST00000498047 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
DCLK3-202ENST00000498047 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
DCLK3-202ENST00000498047 KIF27Q86VH2 1401 aa13.66□□□□□ -0.22
DCLK3-202ENST00000498047 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
DCLK3-202ENST00000498047 GTF3C3Q9Y5Q9 886 aa13.65□□□□□ -0.22
DCLK3-202ENST00000498047 CFTRP13569 1480 aa13.64□□□□□ -0.23
DCLK3-202ENST00000498047 CUX1P39880 1505 aa13.63□□□□□ -0.23
DCLK3-202ENST00000498047 DHX57Q6P158 1386 aaKnown RBP13.59□□□□□ -0.23
DCLK3-202ENST00000498047 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
DCLK3-202ENST00000498047 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
DCLK3-202ENST00000498047 ARHGAP35Q9NRY4 1499 aa13.53□□□□□ -0.24
DCLK3-202ENST00000498047 CCNB3Q8WWL7 1395 aa13.51□□□□□ -0.25
DCLK3-202ENST00000498047 TIAM1Q13009 1591 aa13.49□□□□□ -0.25
DCLK3-202ENST00000498047 MIER1Q8N108 512 aa13.49□□□□□ -0.25
DCLK3-202ENST00000498047 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
DCLK3-202ENST00000498047 FHAD1B1AJZ9 1412 aa13.46□□□□□ -0.26
DCLK3-202ENST00000498047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
DCLK3-202ENST00000498047 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
DCLK3-202ENST00000498047 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
DCLK3-202ENST00000498047 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
DCLK3-202ENST00000498047 IGF1RP08069 1367 aa13.41□□□□□ -0.26
DCLK3-202ENST00000498047 KANK4Q5T7N3 995 aaPredicted RBP13.4□□□□□ -0.26
DCLK3-202ENST00000498047 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
DCLK3-202ENST00000498047 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.26
DCLK3-202ENST00000498047 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms