RNA–Protein interactions for RNA: ENST00000497824.5

C1orf61-224, Transcript of chromosome 1 open reading frame 61, humanhuman

TSL 1 (best)

Gene C1orf61, Length 725 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-224ENST00000497824 AEBP2Q6ZN18 517 aaPredicted RBP12.45□□□□□ -0.42
C1orf61-224ENST00000497824 CHIC1Q5VXU3 224 aa11.7□□□□□ -0.54
C1orf61-224ENST00000497824 SENP3Q9H4L4 574 aaPredicted RBP10.72□□□□□ -0.69
C1orf61-224ENST00000497824 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
C1orf61-224ENST00000497824 NISCHQ9Y2I1 1504 aa10.45□□□□□ -0.74
C1orf61-224ENST00000497824 FOXD1Q16676 465 aa9.95□□□□□ -0.82
C1orf61-224ENST00000497824 POTEDQ86YR6 584 aa9.63□□□□□ -0.87
C1orf61-224ENST00000497824 ABCC9O60706 1549 aa9.58□□□□□ -0.88
C1orf61-224ENST00000497824 MSH5O43196 834 aa9.45□□□□□ -0.9
C1orf61-224ENST00000497824 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
C1orf61-224ENST00000497824 PIAS4Q8N2W9 510 aaPredicted RBP9.29□□□□□ -0.92
C1orf61-224ENST00000497824 PLPPR3Q6T4P5 718 aa9.26□□□□□ -0.93
C1orf61-224ENST00000497824 DNAJC5BQ9UF47 199 aa9.18□□□□□ -0.94
C1orf61-224ENST00000497824 PPP6R1Q9UPN7 881 aa9.12□□□□□ -0.95
C1orf61-224ENST00000497824 ADRA2BP18089 450 aa9.1□□□□□ -0.95
C1orf61-224ENST00000497824 RB1CC1Q8TDY2 1594 aa8.98□□□□□ -0.97
C1orf61-224ENST00000497824 DCAF8L2P0C7V8 631 aa8.96□□□□□ -0.98
C1orf61-224ENST00000497824 PABPN1Q86U42 306 aaKnown RBP eCLIP8.95□□□□□ -0.98
C1orf61-224ENST00000497824 UNC13AQ9UPW8 1703 aa8.92□□□□□ -0.98
C1orf61-224ENST00000497824 NACADO15069 1562 aa8.88□□□□□ -0.99
C1orf61-224ENST00000497824 BICRAQ9NZM4 1560 aa8.82□□□□□ -1
C1orf61-224ENST00000497824 MYO15BQ96JP2 1530 aa8.68□□□□□ -1.02
C1orf61-224ENST00000497824 SCRIBQ14160 1630 aa8.63□□□□□ -1.03
C1orf61-224ENST00000497824 CC2D2AQ9P2K1 1620 aa8.63□□□□□ -1.03
C1orf61-224ENST00000497824 ZCCHC6Q5VYS8 1495 aaKnown RBP8.62□□□□□ -1.03
C1orf61-224ENST00000497824 CECR2Q9BXF3 1484 aa8.59□□□□□ -1.03
C1orf61-224ENST00000497824 EIF4G1Q04637 1599 aaKnown RBP8.56□□□□□ -1.04
C1orf61-224ENST00000497824 DCAF1Q9Y4B6 1507 aa8.54□□□□□ -1.04
C1orf61-224ENST00000497824 SHROOM4Q9ULL8 1493 aa8.48□□□□□ -1.05
C1orf61-224ENST00000497824 DMRT2Q9Y5R5 561 aa8.45□□□□□ -1.06
C1orf61-224ENST00000497824 DNAJC5Q9H3Z4 198 aa8.4□□□□□ -1.06
C1orf61-224ENST00000497824 SCAF1Q9H7N4 1312 aaKnown RBP8.39□□□□□ -1.07
C1orf61-224ENST00000497824 MAPK8IP2Q13387 824 aaPredicted RBP8.39□□□□□ -1.07
C1orf61-224ENST00000497824 NESP48681 1621 aa8.24□□□□□ -1.09
C1orf61-224ENST00000497824 NCAPD3P42695 1498 aa8.22□□□□□ -1.09
C1orf61-224ENST00000497824 ERCC6Q03468 1493 aa8.21□□□□□ -1.09
C1orf61-224ENST00000497824 ATAD2BQ9ULI0 1458 aa8.2□□□□□ -1.1
C1orf61-224ENST00000497824 CACNB1Q02641 598 aaPredicted RBP8.19□□□□□ -1.1
C1orf61-224ENST00000497824 CUX2O14529 1486 aa8.19□□□□□ -1.1
C1orf61-224ENST00000497824 SMARCA4P51532 1647 aa8.18□□□□□ -1.1
C1orf61-224ENST00000497824 SMARCA2P51531 1590 aa8.13□□□□□ -1.11
C1orf61-224ENST00000497824 HMGXB3Q12766 1538 aa8.13□□□□□ -1.11
C1orf61-224ENST00000497824 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
C1orf61-224ENST00000497824 BAZ1BQ9UIG0 1483 aaKnown RBP8.11□□□□□ -1.11
C1orf61-224ENST00000497824 MROH2BQ7Z745 1585 aa8.1□□□□□ -1.11
C1orf61-224ENST00000497824 THOC2Q8NI27 1593 aaKnown RBP8.1□□□□□ -1.11
C1orf61-224ENST00000497824 DCAF8L1A6NGE4 600 aa8.1□□□□□ -1.11
C1orf61-224ENST00000497824 BAZ1AQ9NRL2 1556 aaPredicted RBP8.07□□□□□ -1.12
C1orf61-224ENST00000497824 HOXD11P31277 338 aaPredicted RBP8.06□□□□□ -1.12
C1orf61-224ENST00000497824 PPP4R3CPQ6ZMV5 832 aa8.06□□□□□ -1.12
C1orf61-224ENST00000497824 PEG3Q9GZU2 1588 aa8.05□□□□□ -1.12
C1orf61-224ENST00000497824 LAMC3Q9Y6N6 1575 aa8.04□□□□□ -1.12
C1orf61-224ENST00000497824 WIZO95785 1651 aa8.03□□□□□ -1.12
C1orf61-224ENST00000497824 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
C1orf61-224ENST00000497824 RNF39Q9H2S5 420 aa8.02□□□□□ -1.13
C1orf61-224ENST00000497824 PDS5BQ9NTI5 1447 aa7.98□□□□□ -1.13
C1orf61-224ENST00000497824 CNKSR2Q8WXI2 1034 aa7.98□□□□□ -1.13
C1orf61-224ENST00000497824 CADPSQ9ULU8 1353 aa7.97□□□□□ -1.13
C1orf61-224ENST00000497824 RNF216Q9NWF9 866 aaPredicted RBP7.96□□□□□ -1.14
C1orf61-224ENST00000497824 MRC2Q9UBG0 1479 aa7.95□□□□□ -1.14
C1orf61-224ENST00000497824 WDR62O43379 1518 aa7.93□□□□□ -1.14
C1orf61-224ENST00000497824 FANCD2Q9BXW9 1451 aa7.9□□□□□ -1.14
C1orf61-224ENST00000497824 C1QBPQ07021 282 aaKnown RBP7.9□□□□□ -1.14
C1orf61-224ENST00000497824 CEP164Q9UPV0 1460 aa7.89□□□□□ -1.15
C1orf61-224ENST00000497824 URB2Q14146 1524 aaKnown RBP7.88□□□□□ -1.15
C1orf61-224ENST00000497824 RSF1Q96T23 1441 aaPredicted RBP7.87□□□□□ -1.15
C1orf61-224ENST00000497824 OSCARQ8IYS5 282 aa7.86□□□□□ -1.15
C1orf61-224ENST00000497824 CFTRP13569 1480 aa7.86□□□□□ -1.15
C1orf61-224ENST00000497824 TOP2AP11388 1531 aaKnown RBP7.83□□□□□ -1.16
C1orf61-224ENST00000497824 ZNF608Q9ULD9 1512 aaPredicted RBP7.82□□□□□ -1.16
C1orf61-224ENST00000497824 RIMBP3CA6NJZ7 1639 aa7.81□□□□□ -1.16
C1orf61-224ENST00000497824 RIMBP3BA6NNM3 1639 aa7.81□□□□□ -1.16
C1orf61-224ENST00000497824 RIMBP3Q9UFD9 1639 aa7.81□□□□□ -1.16
C1orf61-224ENST00000497824 PRDM2Q13029 1718 aa7.81□□□□□ -1.16
C1orf61-224ENST00000497824 CCDC88BA6NC98 1476 aa7.79□□□□□ -1.16
C1orf61-224ENST00000497824 TOPBP1Q92547 1522 aa7.75□□□□□ -1.17
C1orf61-224ENST00000497824 CHD1O14646 1710 aa7.75□□□□□ -1.17
C1orf61-224ENST00000497824 NCBP3Q53F19 620 aaKnown RBP7.74□□□□□ -1.17
C1orf61-224ENST00000497824 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
C1orf61-224ENST00000497824 AQRO60306 1485 aaKnown RBP eCLIP7.74□□□□□ -1.17
C1orf61-224ENST00000497824 ARHGEF11O15085 1522 aa7.73□□□□□ -1.17
C1orf61-224ENST00000497824 IFT140Q96RY7 1462 aa7.73□□□□□ -1.17
C1orf61-224ENST00000497824 EIF4G3O43432 1585 aaKnown RBP7.72□□□□□ -1.17
C1orf61-224ENST00000497824 TARBP1Q13395 1621 aaKnown RBP7.7□□□□□ -1.18
C1orf61-224ENST00000497824 FBLN2P98095 1184 aa7.7□□□□□ -1.18
C1orf61-224ENST00000497824 RAD54L2Q9Y4B4 1467 aa7.69□□□□□ -1.18
C1orf61-224ENST00000497824 DNMBPQ6XZF7 1577 aa7.68□□□□□ -1.18
C1orf61-224ENST00000497824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.68□□□□□ -1.18
C1orf61-224ENST00000497824 ARAP1Q96P48 1450 aa7.68□□□□□ -1.18
C1orf61-224ENST00000497824 TRHP20396 242 aaPredicted RBP7.67□□□□□ -1.18
C1orf61-224ENST00000497824 TDRD9Q8NDG6 1382 aaKnown RBP7.67□□□□□ -1.18
C1orf61-224ENST00000497824 POLA1P09884 1462 aaPredicted RBP7.66□□□□□ -1.18
C1orf61-224ENST00000497824 ABCC8Q09428 1581 aa7.63□□□□□ -1.19
C1orf61-224ENST00000497824 SOGA1O94964 1423 aa7.63□□□□□ -1.19
C1orf61-224ENST00000497824 CUX1P39880 1505 aa7.61□□□□□ -1.19
C1orf61-224ENST00000497824 SNAPC4Q5SXM2 1469 aa7.61□□□□□ -1.19
C1orf61-224ENST00000497824 FGD5Q6ZNL6 1462 aa7.61□□□□□ -1.19
C1orf61-224ENST00000497824 NPM3O75607 178 aaKnown RBP7.59□□□□□ -1.19
C1orf61-224ENST00000497824 CHMP7Q8WUX9 453 aaPredicted RBP7.59□□□□□ -1.19
C1orf61-224ENST00000497824 CLASP1Q7Z460 1538 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms