RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
LYSMD4-209ENST00000496108 SHROOM4Q9ULL8 1493 aa34.86■■■■□ 3.17
LYSMD4-209ENST00000496108 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
LYSMD4-209ENST00000496108 SUPT5HO00267 1087 aaKnown RBP34.55■■■■□ 3.12
LYSMD4-209ENST00000496108 ZCCHC6Q5VYS8 1495 aaKnown RBP34.47■■■■□ 3.11
LYSMD4-209ENST00000496108 HRCP23327 699 aa34.42■■■■□ 3.1
LYSMD4-209ENST00000496108 MYO15BQ96JP2 1530 aa34.16■■■■□ 3.06
LYSMD4-209ENST00000496108 CHIC1Q5VXU3 224 aa34.1■■■■□ 3.05
LYSMD4-209ENST00000496108 ABCC9O60706 1549 aa33.78■■■■□ 3
LYSMD4-209ENST00000496108 PCGF6Q9BYE7 350 aa33.73■■■□□ 2.99
LYSMD4-209ENST00000496108 DCAF1Q9Y4B6 1507 aa33.65■■■□□ 2.98
LYSMD4-209ENST00000496108 PPARGC1BQ86YN6 1023 aaKnown RBP33.38■■■□□ 2.93
LYSMD4-209ENST00000496108 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
LYSMD4-209ENST00000496108 TRIM26Q12899 539 aaPredicted RBP33.05■■■□□ 2.88
LYSMD4-209ENST00000496108 LOC105371045A0A1W2PR82 267 aa33■■■□□ 2.87
LYSMD4-209ENST00000496108 ZEB1P37275 1124 aaPredicted RBP32.76■■■□□ 2.83
LYSMD4-209ENST00000496108 PELP1Q8IZL8 1130 aaKnown RBP32.63■■■□□ 2.81
LYSMD4-209ENST00000496108 RB1CC1Q8TDY2 1594 aa32.54■■■□□ 2.8
LYSMD4-209ENST00000496108 NACADO15069 1562 aa32.5■■■□□ 2.79
LYSMD4-209ENST00000496108 RSF1Q96T23 1441 aaPredicted RBP32.33■■■□□ 2.77
LYSMD4-209ENST00000496108 TRIM41Q8WV44 630 aa32.22■■■□□ 2.75
LYSMD4-209ENST00000496108 SCAF1Q9H7N4 1312 aaKnown RBP32.12■■■□□ 2.73
LYSMD4-209ENST00000496108 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
LYSMD4-209ENST00000496108 UNC13AQ9UPW8 1703 aa31.88■■■□□ 2.69
LYSMD4-209ENST00000496108 FAM9AQ8IZU1 332 aaPredicted RBP31.85■■■□□ 2.69
LYSMD4-209ENST00000496108 ACIN1Q9UKV3 1341 aaKnown RBP31.62■■■□□ 2.65
LYSMD4-209ENST00000496108 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
LYSMD4-209ENST00000496108 BICRAQ9NZM4 1560 aa31.54■■■□□ 2.64
LYSMD4-209ENST00000496108 MROH2BQ7Z745 1585 aa31.48■■■□□ 2.63
LYSMD4-209ENST00000496108 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
LYSMD4-209ENST00000496108 CCER1Q8TC90 406 aaPredicted RBP31.45■■■□□ 2.63
LYSMD4-209ENST00000496108 EHMT2Q96KQ7 1210 aa31.45■■■□□ 2.62
LYSMD4-209ENST00000496108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.43■■■□□ 2.62
LYSMD4-209ENST00000496108 NEUROD1Q13562 356 aa31.43■■■□□ 2.62
LYSMD4-209ENST00000496108 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.62
LYSMD4-209ENST00000496108 CENPBP07199 599 aaPredicted RBP31.35■■■□□ 2.61
LYSMD4-209ENST00000496108 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
LYSMD4-209ENST00000496108 WIZO95785 1651 aa31.33■■■□□ 2.61
LYSMD4-209ENST00000496108 BAZ1AQ9NRL2 1556 aaPredicted RBP31.32■■■□□ 2.6
LYSMD4-209ENST00000496108 DIEXFQ68CQ4 756 aaKnown RBP31.3■■■□□ 2.6
LYSMD4-209ENST00000496108 MYT1Q01538 1121 aa31.29■■■□□ 2.6
LYSMD4-209ENST00000496108 GTF3C3Q9Y5Q9 886 aa31.2■■■□□ 2.58
LYSMD4-209ENST00000496108 CEP162Q5TB80 1403 aa31.04■■■□□ 2.56
LYSMD4-209ENST00000496108 TNIKQ9UKE5 1360 aa30.99■■■□□ 2.55
LYSMD4-209ENST00000496108 TOP2AP11388 1531 aaKnown RBP30.95■■■□□ 2.55
LYSMD4-209ENST00000496108 CCDC88BA6NC98 1476 aa30.93■■■□□ 2.54
LYSMD4-209ENST00000496108 ZNF316A6NFI3 1004 aaPredicted RBP30.92■■■□□ 2.54
LYSMD4-209ENST00000496108 EEA1Q15075 1411 aa30.91■■■□□ 2.54
LYSMD4-209ENST00000496108 ABCC8Q09428 1581 aa30.88■■■□□ 2.53
LYSMD4-209ENST00000496108 DNAJC5BQ9UF47 199 aa30.83■■■□□ 2.53
LYSMD4-209ENST00000496108 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
LYSMD4-209ENST00000496108 SOGA1O94964 1423 aa30.76■■■□□ 2.51
LYSMD4-209ENST00000496108 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
LYSMD4-209ENST00000496108 TTBK1Q5TCY1 1321 aaPredicted RBP30.69■■■□□ 2.5
LYSMD4-209ENST00000496108 CSRNP3Q8WYN3 585 aa30.68■■■□□ 2.5
LYSMD4-209ENST00000496108 GOLGA3Q08378 1498 aa30.67■■■□□ 2.5
LYSMD4-209ENST00000496108 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
LYSMD4-209ENST00000496108 UBTFP17480 764 aaKnown RBP30.54■■■□□ 2.48
LYSMD4-209ENST00000496108 RUSC2Q8N2Y8 1516 aa30.54■■■□□ 2.48
LYSMD4-209ENST00000496108 MIER1Q8N108 512 aa30.49■■■□□ 2.47
LYSMD4-209ENST00000496108 YTHDC1Q96MU7 727 aaKnown RBP30.47■■■□□ 2.47
LYSMD4-209ENST00000496108 KIF21BO75037 1637 aa30.43■■■□□ 2.46
LYSMD4-209ENST00000496108 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
LYSMD4-209ENST00000496108 VPS8Q8N3P4 1428 aa30.32■■■□□ 2.44
LYSMD4-209ENST00000496108 CLIP1P30622 1438 aa30.3■■■□□ 2.44
LYSMD4-209ENST00000496108 HNRNPUL2Q1KMD3 747 aaKnown RBP30.29■■■□□ 2.44
LYSMD4-209ENST00000496108 CLSPNQ9HAW4 1339 aa30.29■■■□□ 2.44
LYSMD4-209ENST00000496108 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
LYSMD4-209ENST00000496108 SYNJ1O43426 1573 aa30.16■■■□□ 2.42
LYSMD4-209ENST00000496108 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
LYSMD4-209ENST00000496108 APLP2Q06481 763 aa30.09■■■□□ 2.41
LYSMD4-209ENST00000496108 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.4
LYSMD4-209ENST00000496108 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
LYSMD4-209ENST00000496108 DHX57Q6P158 1386 aaKnown RBP29.98■■■□□ 2.39
LYSMD4-209ENST00000496108 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
LYSMD4-209ENST00000496108 SUPT16HQ9Y5B9 1047 aaKnown RBP29.92■■■□□ 2.38
LYSMD4-209ENST00000496108 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
LYSMD4-209ENST00000496108 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
LYSMD4-209ENST00000496108 CUX2O14529 1486 aa29.78■■■□□ 2.36
LYSMD4-209ENST00000496108 TOP2BQ02880 1626 aa29.78■■■□□ 2.36
LYSMD4-209ENST00000496108 RRBP1Q9P2E9 1410 aaKnown RBP29.76■■■□□ 2.35
LYSMD4-209ENST00000496108 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
LYSMD4-209ENST00000496108 PRXQ9BXM0 1461 aa29.71■■■□□ 2.35
LYSMD4-209ENST00000496108 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
LYSMD4-209ENST00000496108 TSHZ2Q9NRE2 1034 aa29.64■■■□□ 2.33
LYSMD4-209ENST00000496108 KANK4Q5T7N3 995 aaPredicted RBP29.57■■■□□ 2.32
LYSMD4-209ENST00000496108 RANGAP1P46060 587 aaPredicted RBP29.57■■■□□ 2.32
LYSMD4-209ENST00000496108 CCNB3Q8WWL7 1395 aa29.52■■■□□ 2.32
LYSMD4-209ENST00000496108 ANP32EQ9BTT0 268 aa29.51■■■□□ 2.31
LYSMD4-209ENST00000496108 MAPKBP1O60336 1514 aa29.39■■■□□ 2.3
LYSMD4-209ENST00000496108 ARHGAP35Q9NRY4 1499 aa29.35■■■□□ 2.29
LYSMD4-209ENST00000496108 KIF27Q86VH2 1401 aa29.35■■■□□ 2.29
LYSMD4-209ENST00000496108 RAB3GAP2Q9H2M9 1393 aa29.33■■■□□ 2.29
LYSMD4-209ENST00000496108 MAP3K1Q13233 1512 aa29.32■■■□□ 2.28
LYSMD4-209ENST00000496108 CUX1P39880 1505 aa29.27■■■□□ 2.28
LYSMD4-209ENST00000496108 NESP48681 1621 aa29.27■■■□□ 2.28
LYSMD4-209ENST00000496108 KCNH8Q96L42 1107 aa29.26■■■□□ 2.28
LYSMD4-209ENST00000496108 SETD5Q9C0A6 1442 aa29.21■■■□□ 2.27
LYSMD4-209ENST00000496108 TIAM1Q13009 1591 aa29.21■■■□□ 2.27
LYSMD4-209ENST00000496108 LAMC3Q9Y6N6 1575 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms