RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
XPA-204ENST00000496104 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
XPA-204ENST00000496104 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
XPA-204ENST00000496104 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
XPA-204ENST00000496104 FOXD1Q16676 465 aa15.67■□□□□ 0.1
XPA-204ENST00000496104 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
XPA-204ENST00000496104 MSH5O43196 834 aa14.88□□□□□ -0.03
XPA-204ENST00000496104 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
XPA-204ENST00000496104 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
XPA-204ENST00000496104 ADRA2BP18089 450 aa14.12□□□□□ -0.15
XPA-204ENST00000496104 PLPPR3Q6T4P5 718 aa14.04□□□□□ -0.16
XPA-204ENST00000496104 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
XPA-204ENST00000496104 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
XPA-204ENST00000496104 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
XPA-204ENST00000496104 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
XPA-204ENST00000496104 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
XPA-204ENST00000496104 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
XPA-204ENST00000496104 RNF39Q9H2S5 420 aa12.65□□□□□ -0.38
XPA-204ENST00000496104 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
XPA-204ENST00000496104 ABCC9O60706 1549 aa12.5□□□□□ -0.41
XPA-204ENST00000496104 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
XPA-204ENST00000496104 C1QBPQ07021 282 aaKnown RBP12.41□□□□□ -0.42
XPA-204ENST00000496104 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
XPA-204ENST00000496104 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
XPA-204ENST00000496104 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
XPA-204ENST00000496104 POTEHQ6S545 545 aa12.08□□□□□ -0.48
XPA-204ENST00000496104 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
XPA-204ENST00000496104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.516e-6■□□□□ 8.3
XPA-204ENST00000496104 CCDC180Q9P1Z9 1646 aa11.71□□□□□ -0.54
XPA-204ENST00000496104 DSG3P32926 999 aa11.64□□□□□ -0.55
XPA-204ENST00000496104 CAPN15O75808 1086 aa11.58□□□□□ -0.56
XPA-204ENST00000496104 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
XPA-204ENST00000496104 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
XPA-204ENST00000496104 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
XPA-204ENST00000496104 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
XPA-204ENST00000496104 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
XPA-204ENST00000496104 NPM3O75607 178 aaKnown RBP11.42□□□□□ -0.58
XPA-204ENST00000496104 UNC13AQ9UPW8 1703 aa11.38□□□□□ -0.59
XPA-204ENST00000496104 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
XPA-204ENST00000496104 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
XPA-204ENST00000496104 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.6
XPA-204ENST00000496104 ABCB7O75027 752 aa11.27□□□□□ -0.61
XPA-204ENST00000496104 TRHP20396 242 aaPredicted RBP11.25□□□□□ -0.61
XPA-204ENST00000496104 NACADO15069 1562 aa11.22□□□□□ -0.61
XPA-204ENST00000496104 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
XPA-204ENST00000496104 APLP2Q06481 763 aa11.12□□□□□ -0.63
XPA-204ENST00000496104 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
XPA-204ENST00000496104 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
XPA-204ENST00000496104 CUX2O14529 1486 aa11.07□□□□□ -0.64
XPA-204ENST00000496104 SLC4A2P04920 1241 aa11.07□□□□□ -0.64
XPA-204ENST00000496104 EIF4G1Q04637 1599 aaKnown RBP11.06□□□□□ -0.64
XPA-204ENST00000496104 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
XPA-204ENST00000496104 TRIM41Q8WV44 630 aa11.02□□□□□ -0.65
XPA-204ENST00000496104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.97□□□□□ -0.65
XPA-204ENST00000496104 HNRNPUL2Q1KMD3 747 aaKnown RBP10.97□□□□□ -0.65
XPA-204ENST00000496104 SHROOM4Q9ULL8 1493 aa10.97□□□□□ -0.65
XPA-204ENST00000496104 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
XPA-204ENST00000496104 MYO15BQ96JP2 1530 aa10.84□□□□□ -0.67
XPA-204ENST00000496104 POLA2Q14181 598 aa10.8□□□□□ -0.68
XPA-204ENST00000496104 DCAF8L2P0C7V8 631 aa10.77□□□□□ -0.69
XPA-204ENST00000496104 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
XPA-204ENST00000496104 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
XPA-204ENST00000496104 ERCC6Q03468 1493 aa10.73□□□□□ -0.69
XPA-204ENST00000496104 HAX1O00165 279 aa10.71□□□□□ -0.69
XPA-204ENST00000496104 THOC2Q8NI27 1593 aaKnown RBP10.66□□□□□ -0.7
XPA-204ENST00000496104 KCNA4P22459 653 aa10.66□□□□□ -0.7
XPA-204ENST00000496104 REM2Q8IYK8 340 aaPredicted RBP10.64□□□□□ -0.71
XPA-204ENST00000496104 SCRIBQ14160 1630 aa10.63□□□□□ -0.71
XPA-204ENST00000496104 NESP48681 1621 aa10.58□□□□□ -0.72
XPA-204ENST00000496104 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
XPA-204ENST00000496104 MYCNP04198 464 aaPredicted RBP10.56□□□□□ -0.72
XPA-204ENST00000496104 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
XPA-204ENST00000496104 EVX2Q03828 476 aa10.54□□□□□ -0.72
XPA-204ENST00000496104 ZBTB12Q9Y330 459 aaPredicted RBP10.5□□□□□ -0.73
XPA-204ENST00000496104 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
XPA-204ENST00000496104 RIMBP3CA6NJZ7 1639 aa10.45□□□□□ -0.74
XPA-204ENST00000496104 RIMBP3BA6NNM3 1639 aa10.45□□□□□ -0.74
XPA-204ENST00000496104 RIMBP3Q9UFD9 1639 aa10.45□□□□□ -0.74
XPA-204ENST00000496104 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
XPA-204ENST00000496104 SMARCA2P51531 1590 aa10.42□□□□□ -0.74
XPA-204ENST00000496104 DCAF1Q9Y4B6 1507 aa10.41□□□□□ -0.74
XPA-204ENST00000496104 NCAPD3P42695 1498 aa10.41□□□□□ -0.74
XPA-204ENST00000496104 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
XPA-204ENST00000496104 KIF21AQ7Z4S6 1674 aa10.39□□□□□ -0.75
XPA-204ENST00000496104 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
XPA-204ENST00000496104 ZCCHC6Q5VYS8 1495 aaKnown RBP10.37□□□□□ -0.75
XPA-204ENST00000496104 LHX8Q68G74 356 aa10.35□□□□□ -0.75
XPA-204ENST00000496104 ARHGEF11O15085 1522 aa10.33□□□□□ -0.76
XPA-204ENST00000496104 ATAD2BQ9ULI0 1458 aa10.28□□□□□ -0.76
XPA-204ENST00000496104 WDR62O43379 1518 aa10.28□□□□□ -0.76
XPA-204ENST00000496104 HMGXB3Q12766 1538 aa10.27□□□□□ -0.77
XPA-204ENST00000496104 LAMC3Q9Y6N6 1575 aa10.26□□□□□ -0.77
XPA-204ENST00000496104 GABBR2O75899 941 aa10.26□□□□□ -0.77
XPA-204ENST00000496104 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
XPA-204ENST00000496104 C19orf67A6NJJ6 358 aa10.25□□□□□ -0.77
XPA-204ENST00000496104 EHMT2Q96KQ7 1210 aa10.22□□□□□ -0.77
XPA-204ENST00000496104 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
XPA-204ENST00000496104 ARAP1Q96P48 1450 aa10.21□□□□□ -0.78
XPA-204ENST00000496104 MRC2Q9UBG0 1479 aa10.21□□□□□ -0.78
XPA-204ENST00000496104 CLEC11AQ9Y240 323 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms