RNA–Protein interactions for RNA: ENST00000496000.1

RUNDC3B-208, Transcript of RUN domain containing 3B, humanhuman

TSL 4

Gene RUNDC3B, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-208ENST00000496000 NISCHQ9Y2I1 1504 aa16.95■□□□□ 0.3
RUNDC3B-208ENST00000496000 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
RUNDC3B-208ENST00000496000 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
RUNDC3B-208ENST00000496000 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
RUNDC3B-208ENST00000496000 ABCC9O60706 1549 aa14.68□□□□□ -0.06
RUNDC3B-208ENST00000496000 HRCP23327 699 aa14.65□□□□□ -0.06
RUNDC3B-208ENST00000496000 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
RUNDC3B-208ENST00000496000 DCAF8L2P0C7V8 631 aa14.32□□□□□ -0.12
RUNDC3B-208ENST00000496000 DCAF1Q9Y4B6 1507 aa14.31□□□□□ -0.12
RUNDC3B-208ENST00000496000 MYT1Q01538 1121 aa14.31□□□□□ -0.12
RUNDC3B-208ENST00000496000 ZEB1P37275 1124 aaPredicted RBP14.25□□□□□ -0.13
RUNDC3B-208ENST00000496000 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
RUNDC3B-208ENST00000496000 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
RUNDC3B-208ENST00000496000 SHROOM4Q9ULL8 1493 aa14.19□□□□□ -0.14
RUNDC3B-208ENST00000496000 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
RUNDC3B-208ENST00000496000 NACADO15069 1562 aa14.16□□□□□ -0.14
RUNDC3B-208ENST00000496000 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
RUNDC3B-208ENST00000496000 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
RUNDC3B-208ENST00000496000 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
RUNDC3B-208ENST00000496000 PPARGC1BQ86YN6 1023 aaKnown RBP13.82□□□□□ -0.2
RUNDC3B-208ENST00000496000 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
RUNDC3B-208ENST00000496000 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
RUNDC3B-208ENST00000496000 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
RUNDC3B-208ENST00000496000 CENPBP07199 599 aaPredicted RBP13.67□□□□□ -0.22
RUNDC3B-208ENST00000496000 UNC13AQ9UPW8 1703 aa13.65□□□□□ -0.22
RUNDC3B-208ENST00000496000 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
RUNDC3B-208ENST00000496000 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.24
RUNDC3B-208ENST00000496000 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
RUNDC3B-208ENST00000496000 LOC105371045A0A1W2PR82 267 aa13.52□□□□□ -0.25
RUNDC3B-208ENST00000496000 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
RUNDC3B-208ENST00000496000 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.25
RUNDC3B-208ENST00000496000 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
RUNDC3B-208ENST00000496000 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
RUNDC3B-208ENST00000496000 CCER1Q8TC90 406 aaPredicted RBP13.32□□□□□ -0.28
RUNDC3B-208ENST00000496000 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
RUNDC3B-208ENST00000496000 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
RUNDC3B-208ENST00000496000 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
RUNDC3B-208ENST00000496000 GTF3C3Q9Y5Q9 886 aa13.27□□□□□ -0.29
RUNDC3B-208ENST00000496000 NEUROD1Q13562 356 aa13.25□□□□□ -0.29
RUNDC3B-208ENST00000496000 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
RUNDC3B-208ENST00000496000 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
RUNDC3B-208ENST00000496000 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
RUNDC3B-208ENST00000496000 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
RUNDC3B-208ENST00000496000 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
RUNDC3B-208ENST00000496000 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
RUNDC3B-208ENST00000496000 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
RUNDC3B-208ENST00000496000 EEA1Q15075 1411 aa13.13□□□□□ -0.31
RUNDC3B-208ENST00000496000 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
RUNDC3B-208ENST00000496000 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
RUNDC3B-208ENST00000496000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
RUNDC3B-208ENST00000496000 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
RUNDC3B-208ENST00000496000 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
RUNDC3B-208ENST00000496000 NCAPD3P42695 1498 aa13.03□□□□□ -0.32
RUNDC3B-208ENST00000496000 BAZ1BQ9UIG0 1483 aaKnown RBP13.03□□□□□ -0.32
RUNDC3B-208ENST00000496000 TNIKQ9UKE5 1360 aa13.01□□□□□ -0.33
RUNDC3B-208ENST00000496000 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
RUNDC3B-208ENST00000496000 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
RUNDC3B-208ENST00000496000 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
RUNDC3B-208ENST00000496000 WIZO95785 1651 aa12.89□□□□□ -0.35
RUNDC3B-208ENST00000496000 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
RUNDC3B-208ENST00000496000 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
RUNDC3B-208ENST00000496000 APLP2Q06481 763 aa12.81□□□□□ -0.36
RUNDC3B-208ENST00000496000 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
RUNDC3B-208ENST00000496000 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
RUNDC3B-208ENST00000496000 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
RUNDC3B-208ENST00000496000 MIER1Q8N108 512 aa12.77□□□□□ -0.37
RUNDC3B-208ENST00000496000 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
RUNDC3B-208ENST00000496000 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
RUNDC3B-208ENST00000496000 EHMT2Q96KQ7 1210 aa12.73□□□□□ -0.37
RUNDC3B-208ENST00000496000 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
RUNDC3B-208ENST00000496000 KIF21BO75037 1637 aa12.73□□□□□ -0.37
RUNDC3B-208ENST00000496000 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
RUNDC3B-208ENST00000496000 SUPT16HQ9Y5B9 1047 aaKnown RBP12.71□□□□□ -0.37
RUNDC3B-208ENST00000496000 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.38
RUNDC3B-208ENST00000496000 CADPSQ9ULU8 1353 aa12.7□□□□□ -0.38
RUNDC3B-208ENST00000496000 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
RUNDC3B-208ENST00000496000 PDS5BQ9NTI5 1447 aa12.7□□□□□ -0.38
RUNDC3B-208ENST00000496000 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
RUNDC3B-208ENST00000496000 FOXD1Q16676 465 aa12.66□□□□□ -0.38
RUNDC3B-208ENST00000496000 NESP48681 1621 aa12.66□□□□□ -0.38
RUNDC3B-208ENST00000496000 CLIP1P30622 1438 aa12.65□□□□□ -0.38
RUNDC3B-208ENST00000496000 NEFLP07196 543 aa12.65□□□□□ -0.38
RUNDC3B-208ENST00000496000 CFTRP13569 1480 aa12.6□□□□□ -0.39
RUNDC3B-208ENST00000496000 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
RUNDC3B-208ENST00000496000 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
RUNDC3B-208ENST00000496000 SOGA1O94964 1423 aa12.6□□□□□ -0.39
RUNDC3B-208ENST00000496000 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
RUNDC3B-208ENST00000496000 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
RUNDC3B-208ENST00000496000 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
RUNDC3B-208ENST00000496000 CUX2O14529 1486 aa12.54□□□□□ -0.4
RUNDC3B-208ENST00000496000 DHX57Q6P158 1386 aaKnown RBP12.53□□□□□ -0.4
RUNDC3B-208ENST00000496000 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
RUNDC3B-208ENST00000496000 MRC2Q9UBG0 1479 aa12.52□□□□□ -0.41
RUNDC3B-208ENST00000496000 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
RUNDC3B-208ENST00000496000 RRBP1Q9P2E9 1410 aaKnown RBP12.49□□□□□ -0.41
RUNDC3B-208ENST00000496000 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
RUNDC3B-208ENST00000496000 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
RUNDC3B-208ENST00000496000 CCER2I3L3R5 266 aa12.47□□□□□ -0.41
RUNDC3B-208ENST00000496000 ERICH6BQ5W0A0 696 aa12.47□□□□□ -0.41
RUNDC3B-208ENST00000496000 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms