RNA–Protein interactions for RNA: ENST00000494714.5

TTC12-212, Transcript of tetratricopeptide repeat domain 12, humanhuman

TSL 1 (best)

Gene TTC12, Length 2,520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC12-212ENST00000494714 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
TTC12-212ENST00000494714 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
TTC12-212ENST00000494714 ABCC9O60706 1549 aa18.51■□□□□ 0.55
TTC12-212ENST00000494714 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
TTC12-212ENST00000494714 HRCP23327 699 aa18.08■□□□□ 0.49
TTC12-212ENST00000494714 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
TTC12-212ENST00000494714 NACADO15069 1562 aa17.85■□□□□ 0.45
TTC12-212ENST00000494714 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
TTC12-212ENST00000494714 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
TTC12-212ENST00000494714 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
TTC12-212ENST00000494714 SHROOM4Q9ULL8 1493 aa17.66■□□□□ 0.42
TTC12-212ENST00000494714 SUPT5HO00267 1087 aaKnown RBP17.64■□□□□ 0.41
TTC12-212ENST00000494714 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
TTC12-212ENST00000494714 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
TTC12-212ENST00000494714 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
TTC12-212ENST00000494714 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
TTC12-212ENST00000494714 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
TTC12-212ENST00000494714 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
TTC12-212ENST00000494714 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.37
TTC12-212ENST00000494714 BICRAQ9NZM4 1560 aa17.31■□□□□ 0.36
TTC12-212ENST00000494714 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
TTC12-212ENST00000494714 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.33
TTC12-212ENST00000494714 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
TTC12-212ENST00000494714 MYT1Q01538 1121 aa17.02■□□□□ 0.32
TTC12-212ENST00000494714 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
TTC12-212ENST00000494714 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
TTC12-212ENST00000494714 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
TTC12-212ENST00000494714 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
TTC12-212ENST00000494714 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
TTC12-212ENST00000494714 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
TTC12-212ENST00000494714 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
TTC12-212ENST00000494714 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
TTC12-212ENST00000494714 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
TTC12-212ENST00000494714 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
TTC12-212ENST00000494714 ATAD2BQ9ULI0 1458 aa16.59■□□□□ 0.25
TTC12-212ENST00000494714 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
TTC12-212ENST00000494714 CENPBP07199 599 aaPredicted RBP16.54■□□□□ 0.24
TTC12-212ENST00000494714 WIZO95785 1651 aa16.54■□□□□ 0.24
TTC12-212ENST00000494714 GTF3C3Q9Y5Q9 886 aa16.53■□□□□ 0.24
TTC12-212ENST00000494714 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
TTC12-212ENST00000494714 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
TTC12-212ENST00000494714 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
TTC12-212ENST00000494714 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
TTC12-212ENST00000494714 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
TTC12-212ENST00000494714 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
TTC12-212ENST00000494714 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
TTC12-212ENST00000494714 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
TTC12-212ENST00000494714 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
TTC12-212ENST00000494714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
TTC12-212ENST00000494714 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
TTC12-212ENST00000494714 CCDC88BA6NC98 1476 aa16.21■□□□□ 0.18
TTC12-212ENST00000494714 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
TTC12-212ENST00000494714 NESP48681 1621 aa16.11■□□□□ 0.17
TTC12-212ENST00000494714 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
TTC12-212ENST00000494714 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
TTC12-212ENST00000494714 YTHDC1Q96MU7 727 aaKnown RBP16.04■□□□□ 0.16
TTC12-212ENST00000494714 CFTRP13569 1480 aa16.02■□□□□ 0.15
TTC12-212ENST00000494714 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
TTC12-212ENST00000494714 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
TTC12-212ENST00000494714 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
TTC12-212ENST00000494714 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
TTC12-212ENST00000494714 MIER1Q8N108 512 aa15.91■□□□□ 0.14
TTC12-212ENST00000494714 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
TTC12-212ENST00000494714 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
TTC12-212ENST00000494714 CLSPNQ9HAW4 1339 aa15.88■□□□□ 0.13
TTC12-212ENST00000494714 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.12
TTC12-212ENST00000494714 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
TTC12-212ENST00000494714 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
TTC12-212ENST00000494714 ANP32EQ9BTT0 268 aa15.78■□□□□ 0.12
TTC12-212ENST00000494714 CEP162Q5TB80 1403 aa15.77■□□□□ 0.11
TTC12-212ENST00000494714 MRC2Q9UBG0 1479 aa15.74■□□□□ 0.11
TTC12-212ENST00000494714 BCL11AQ9H165 835 aa15.74■□□□□ 0.11
TTC12-212ENST00000494714 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
TTC12-212ENST00000494714 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
TTC12-212ENST00000494714 ABCC8Q09428 1581 aa15.71■□□□□ 0.11
TTC12-212ENST00000494714 THOC2Q8NI27 1593 aaKnown RBP15.71■□□□□ 0.11
TTC12-212ENST00000494714 TNIKQ9UKE5 1360 aa15.69■□□□□ 0.1
TTC12-212ENST00000494714 TSHZ2Q9NRE2 1034 aa15.67■□□□□ 0.1
TTC12-212ENST00000494714 WDR62O43379 1518 aa15.66■□□□□ 0.1
TTC12-212ENST00000494714 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
TTC12-212ENST00000494714 CUX1P39880 1505 aa15.65■□□□□ 0.1
TTC12-212ENST00000494714 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
TTC12-212ENST00000494714 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
TTC12-212ENST00000494714 CUX2O14529 1486 aa15.57■□□□□ 0.08
TTC12-212ENST00000494714 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
TTC12-212ENST00000494714 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
TTC12-212ENST00000494714 EEA1Q15075 1411 aa15.56■□□□□ 0.08
TTC12-212ENST00000494714 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
TTC12-212ENST00000494714 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
TTC12-212ENST00000494714 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
TTC12-212ENST00000494714 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
TTC12-212ENST00000494714 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
TTC12-212ENST00000494714 BIVM-ERCC5R4GMW8 1640 aa15.51■□□□□ 0.07
TTC12-212ENST00000494714 SOGA1O94964 1423 aa15.51■□□□□ 0.07
TTC12-212ENST00000494714 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
TTC12-212ENST00000494714 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
TTC12-212ENST00000494714 ZNF608Q9ULD9 1512 aaPredicted RBP15.45■□□□□ 0.06
TTC12-212ENST00000494714 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
TTC12-212ENST00000494714 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
TTC12-212ENST00000494714 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.067e-7■■■■■ 31.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms