RNA–Protein interactions for RNA: ENST00000494482.1

PARD3B-211, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 4

Gene PARD3B, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-211ENST00000494482 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
PARD3B-211ENST00000494482 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
PARD3B-211ENST00000494482 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
PARD3B-211ENST00000494482 NISCHQ9Y2I1 1504 aa13.89□□□□□ -0.19
PARD3B-211ENST00000494482 SENP3Q9H4L4 574 aaPredicted RBP13.6□□□□□ -0.23
PARD3B-211ENST00000494482 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.33
PARD3B-211ENST00000494482 FOXD1Q16676 465 aa12.64□□□□□ -0.39
PARD3B-211ENST00000494482 ADRA2BP18089 450 aa12.39□□□□□ -0.43
PARD3B-211ENST00000494482 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
PARD3B-211ENST00000494482 CCDC180Q9P1Z9 1646 aa12.2□□□□□ -0.46
PARD3B-211ENST00000494482 PIAS4Q8N2W9 510 aaPredicted RBP12□□□□□ -0.49
PARD3B-211ENST00000494482 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
PARD3B-211ENST00000494482 ABCC9O60706 1549 aa11.57□□□□□ -0.56
PARD3B-211ENST00000494482 KCNA4P22459 653 aa11.57□□□□□ -0.56
PARD3B-211ENST00000494482 PPP4R3CPQ6ZMV5 832 aa11.55□□□□□ -0.56
PARD3B-211ENST00000494482 DCAF1Q9Y4B6 1507 aa11.53□□□□□ -0.56
PARD3B-211ENST00000494482 MSH5O43196 834 aa11.51□□□□□ -0.57
PARD3B-211ENST00000494482 MYO15BQ96JP2 1530 aa11.45□□□□□ -0.58
PARD3B-211ENST00000494482 NACADO15069 1562 aa11.36□□□□□ -0.59
PARD3B-211ENST00000494482 NCBP3Q53F19 620 aaKnown RBP11.28□□□□□ -0.6
PARD3B-211ENST00000494482 RB1CC1Q8TDY2 1594 aa11.27□□□□□ -0.61
PARD3B-211ENST00000494482 SCAF1Q9H7N4 1312 aaKnown RBP11.24□□□□□ -0.61
PARD3B-211ENST00000494482 DCAF8L2P0C7V8 631 aa11.23□□□□□ -0.61
PARD3B-211ENST00000494482 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
PARD3B-211ENST00000494482 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
PARD3B-211ENST00000494482 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
PARD3B-211ENST00000494482 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
PARD3B-211ENST00000494482 SHROOM4Q9ULL8 1493 aa11.11□□□□□ -0.63
PARD3B-211ENST00000494482 EHMT2Q96KQ7 1210 aa11.09□□□□□ -0.63
PARD3B-211ENST00000494482 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
PARD3B-211ENST00000494482 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
PARD3B-211ENST00000494482 BICRAQ9NZM4 1560 aa11.02□□□□□ -0.65
PARD3B-211ENST00000494482 DMRT2Q9Y5R5 561 aa10.89□□□□□ -0.67
PARD3B-211ENST00000494482 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
PARD3B-211ENST00000494482 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
PARD3B-211ENST00000494482 CECR2Q9BXF3 1484 aa10.79□□□□□ -0.68
PARD3B-211ENST00000494482 CSRNP3Q8WYN3 585 aa10.75□□□□□ -0.69
PARD3B-211ENST00000494482 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
PARD3B-211ENST00000494482 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
PARD3B-211ENST00000494482 SMARCA4P51532 1647 aa10.71□□□□□ -0.69
PARD3B-211ENST00000494482 RSF1Q96T23 1441 aaPredicted RBP10.71□□□□□ -0.69
PARD3B-211ENST00000494482 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.69
PARD3B-211ENST00000494482 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.71
PARD3B-211ENST00000494482 ZBTB22O15209 634 aa10.64□□□□□ -0.71
PARD3B-211ENST00000494482 PEG3Q9GZU2 1588 aa10.63□□□□□ -0.71
PARD3B-211ENST00000494482 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
PARD3B-211ENST00000494482 WIZO95785 1651 aa10.59□□□□□ -0.71
PARD3B-211ENST00000494482 ATAD2BQ9ULI0 1458 aa10.56□□□□□ -0.72
PARD3B-211ENST00000494482 DCAF8L1A6NGE4 600 aa10.56□□□□□ -0.72
PARD3B-211ENST00000494482 SUPT5HO00267 1087 aaKnown RBP10.55□□□□□ -0.72
PARD3B-211ENST00000494482 SMARCA2P51531 1590 aa10.54□□□□□ -0.72
PARD3B-211ENST00000494482 TOP2AP11388 1531 aaKnown RBP10.53□□□□□ -0.72
PARD3B-211ENST00000494482 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
PARD3B-211ENST00000494482 HMGXB3Q12766 1538 aa10.5□□□□□ -0.73
PARD3B-211ENST00000494482 CC2D2AQ9P2K1 1620 aa10.5□□□□□ -0.73
PARD3B-211ENST00000494482 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
PARD3B-211ENST00000494482 SLC4A2P04920 1241 aa10.46□□□□□ -0.73
PARD3B-211ENST00000494482 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
PARD3B-211ENST00000494482 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
PARD3B-211ENST00000494482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.32□□□□□ -0.76
PARD3B-211ENST00000494482 MYCNP04198 464 aaPredicted RBP10.26□□□□□ -0.77
PARD3B-211ENST00000494482 CFTRP13569 1480 aa10.23□□□□□ -0.77
PARD3B-211ENST00000494482 CADPSQ9ULU8 1353 aa10.16□□□□□ -0.78
PARD3B-211ENST00000494482 PRDM2Q13029 1718 aa10.16□□□□□ -0.78
PARD3B-211ENST00000494482 U3KPZ7 1027 aaPredicted RBP10.15□□□□□ -0.78
PARD3B-211ENST00000494482 LAMC3Q9Y6N6 1575 aa10.14□□□□□ -0.79
PARD3B-211ENST00000494482 POTEDQ86YR6 584 aa10.14□□□□□ -0.79
PARD3B-211ENST00000494482 NESP48681 1621 aa10.14□□□□□ -0.79
PARD3B-211ENST00000494482 ABCC8Q09428 1581 aa10.11□□□□□ -0.79
PARD3B-211ENST00000494482 SYNJ1O43426 1573 aa10.07□□□□□ -0.8
PARD3B-211ENST00000494482 FANCD2Q9BXW9 1451 aa10.07□□□□□ -0.8
PARD3B-211ENST00000494482 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
PARD3B-211ENST00000494482 CUX1P39880 1505 aa10.06□□□□□ -0.8
PARD3B-211ENST00000494482 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
PARD3B-211ENST00000494482 ATF5Q9Y2D1 282 aaPredicted RBP10.04□□□□□ -0.8
PARD3B-211ENST00000494482 BIVM-ERCC5R4GMW8 1640 aa10.04□□□□□ -0.8
PARD3B-211ENST00000494482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.03□□□□□ -0.8
PARD3B-211ENST00000494482 HNRNPUL2Q1KMD3 747 aaKnown RBP10.03□□□□□ -0.8
PARD3B-211ENST00000494482 TOP2BQ02880 1626 aa10.03□□□□□ -0.8
PARD3B-211ENST00000494482 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.8
PARD3B-211ENST00000494482 SAMD1Q6SPF0 538 aaPredicted RBP10.02□□□□□ -0.81
PARD3B-211ENST00000494482 CEP164Q9UPV0 1460 aa10.02□□□□□ -0.81
PARD3B-211ENST00000494482 PDS5BQ9NTI5 1447 aa10.01□□□□□ -0.81
PARD3B-211ENST00000494482 URB2Q14146 1524 aaKnown RBP10□□□□□ -0.81
PARD3B-211ENST00000494482 DNMBPQ6XZF7 1577 aa9.99□□□□□ -0.81
PARD3B-211ENST00000494482 TOPBP1Q92547 1522 aa9.97□□□□□ -0.81
PARD3B-211ENST00000494482 THOC2Q8NI27 1593 aaKnown RBP9.97□□□□□ -0.81
PARD3B-211ENST00000494482 MRC2Q9UBG0 1479 aa9.95□□□□□ -0.82
PARD3B-211ENST00000494482 WDR62O43379 1518 aa9.94□□□□□ -0.82
PARD3B-211ENST00000494482 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
PARD3B-211ENST00000494482 POLA1P09884 1462 aaPredicted RBP9.92□□□□□ -0.82
PARD3B-211ENST00000494482 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
PARD3B-211ENST00000494482 WDR97A6NE52 1622 aa9.89□□□□□ -0.83
PARD3B-211ENST00000494482 RNF39Q9H2S5 420 aa9.89□□□□□ -0.83
PARD3B-211ENST00000494482 ERCC6Q03468 1493 aa9.89□□□□□ -0.83
PARD3B-211ENST00000494482 SOGA1O94964 1423 aa9.89□□□□□ -0.83
PARD3B-211ENST00000494482 CUX2O14529 1486 aa9.87□□□□□ -0.83
PARD3B-211ENST00000494482 APLP2Q06481 763 aa9.87□□□□□ -0.83
PARD3B-211ENST00000494482 ABCA10Q8WWZ4 1543 aa9.87□□□□□ -0.83
PARD3B-211ENST00000494482 TARBP1Q13395 1621 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms