RNA–Protein interactions for RNA: ENST00000494143.5

TYSND1-204, Transcript of trypsin domain containing 1, humanhuman

TSL 2

Gene TYSND1, Length 3,341 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYSND1-204ENST00000494143 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
TYSND1-204ENST00000494143 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
TYSND1-204ENST00000494143 HRCP23327 699 aa20.94■□□□□ 0.94
TYSND1-204ENST00000494143 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.91
TYSND1-204ENST00000494143 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
TYSND1-204ENST00000494143 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
TYSND1-204ENST00000494143 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
TYSND1-204ENST00000494143 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
TYSND1-204ENST00000494143 PPARGC1BQ86YN6 1023 aaKnown RBP20.44■□□□□ 0.86
TYSND1-204ENST00000494143 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
TYSND1-204ENST00000494143 DCAF1Q9Y4B6 1507 aa20.18■□□□□ 0.82
TYSND1-204ENST00000494143 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
TYSND1-204ENST00000494143 ABCC9O60706 1549 aa20.08■□□□□ 0.8
TYSND1-204ENST00000494143 PELP1Q8IZL8 1130 aaKnown RBP20.07■□□□□ 0.8
TYSND1-204ENST00000494143 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
TYSND1-204ENST00000494143 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
TYSND1-204ENST00000494143 NACADO15069 1562 aa19.8■□□□□ 0.76
TYSND1-204ENST00000494143 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
TYSND1-204ENST00000494143 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
TYSND1-204ENST00000494143 RB1CC1Q8TDY2 1594 aa19.62■□□□□ 0.73
TYSND1-204ENST00000494143 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
TYSND1-204ENST00000494143 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
TYSND1-204ENST00000494143 MYT1Q01538 1121 aa19.25■□□□□ 0.67
TYSND1-204ENST00000494143 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
TYSND1-204ENST00000494143 UNC13AQ9UPW8 1703 aa19.19■□□□□ 0.66
TYSND1-204ENST00000494143 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
TYSND1-204ENST00000494143 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.65
TYSND1-204ENST00000494143 RSF1Q96T23 1441 aaPredicted RBP19.07■□□□□ 0.64
TYSND1-204ENST00000494143 FAM9AQ8IZU1 332 aaPredicted RBP19.06■□□□□ 0.64
TYSND1-204ENST00000494143 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.63
TYSND1-204ENST00000494143 CENPBP07199 599 aaPredicted RBP18.99■□□□□ 0.63
TYSND1-204ENST00000494143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
TYSND1-204ENST00000494143 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
TYSND1-204ENST00000494143 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
TYSND1-204ENST00000494143 CECR2Q9BXF3 1484 aa18.95■□□□□ 0.62
TYSND1-204ENST00000494143 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
TYSND1-204ENST00000494143 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
TYSND1-204ENST00000494143 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
TYSND1-204ENST00000494143 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
TYSND1-204ENST00000494143 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
TYSND1-204ENST00000494143 WIZO95785 1651 aa18.68■□□□□ 0.58
TYSND1-204ENST00000494143 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
TYSND1-204ENST00000494143 ZNF316A6NFI3 1004 aaPredicted RBP18.63■□□□□ 0.57
TYSND1-204ENST00000494143 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
TYSND1-204ENST00000494143 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
TYSND1-204ENST00000494143 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
TYSND1-204ENST00000494143 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
TYSND1-204ENST00000494143 MIER1Q8N108 512 aa18.49■□□□□ 0.55
TYSND1-204ENST00000494143 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
TYSND1-204ENST00000494143 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
TYSND1-204ENST00000494143 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
TYSND1-204ENST00000494143 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
TYSND1-204ENST00000494143 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
TYSND1-204ENST00000494143 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
TYSND1-204ENST00000494143 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.53
TYSND1-204ENST00000494143 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
TYSND1-204ENST00000494143 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
TYSND1-204ENST00000494143 SOGA1O94964 1423 aa18.26■□□□□ 0.51
TYSND1-204ENST00000494143 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
TYSND1-204ENST00000494143 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
TYSND1-204ENST00000494143 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
TYSND1-204ENST00000494143 EEA1Q15075 1411 aa18.19■□□□□ 0.5
TYSND1-204ENST00000494143 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
TYSND1-204ENST00000494143 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
TYSND1-204ENST00000494143 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
TYSND1-204ENST00000494143 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
TYSND1-204ENST00000494143 GOLGA3Q08378 1498 aa18.13■□□□□ 0.49
TYSND1-204ENST00000494143 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
TYSND1-204ENST00000494143 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
TYSND1-204ENST00000494143 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
TYSND1-204ENST00000494143 BCL11AQ9H165 835 aa18.02■□□□□ 0.48
TYSND1-204ENST00000494143 VPS8Q8N3P4 1428 aa17.98■□□□□ 0.47
TYSND1-204ENST00000494143 CLIP1P30622 1438 aa17.97■□□□□ 0.47
TYSND1-204ENST00000494143 KIF21BO75037 1637 aa17.96■□□□□ 0.47
TYSND1-204ENST00000494143 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.46
TYSND1-204ENST00000494143 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
TYSND1-204ENST00000494143 CFTRP13569 1480 aa17.88■□□□□ 0.45
TYSND1-204ENST00000494143 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.44
TYSND1-204ENST00000494143 APLP2Q06481 763 aa17.82■□□□□ 0.44
TYSND1-204ENST00000494143 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
TYSND1-204ENST00000494143 KCNH8Q96L42 1107 aa17.78■□□□□ 0.44
TYSND1-204ENST00000494143 RAPGEF2Q9Y4G8 1499 aa17.78■□□□□ 0.44
TYSND1-204ENST00000494143 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
TYSND1-204ENST00000494143 BCANQ96GW7 911 aa17.74■□□□□ 0.43
TYSND1-204ENST00000494143 CUX2O14529 1486 aa17.71■□□□□ 0.43
TYSND1-204ENST00000494143 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
TYSND1-204ENST00000494143 FKBP8Q14318 412 aa17.7■□□□□ 0.42
TYSND1-204ENST00000494143 RBM19Q9Y4C8 960 aaKnown RBP17.7■□□□□ 0.42
TYSND1-204ENST00000494143 RRBP1Q9P2E9 1410 aaKnown RBP17.68■□□□□ 0.42
TYSND1-204ENST00000494143 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
TYSND1-204ENST00000494143 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
TYSND1-204ENST00000494143 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
TYSND1-204ENST00000494143 ARAP1Q96P48 1450 aa17.64■□□□□ 0.41
TYSND1-204ENST00000494143 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
TYSND1-204ENST00000494143 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
TYSND1-204ENST00000494143 NESP48681 1621 aa17.63■□□□□ 0.41
TYSND1-204ENST00000494143 CUX1P39880 1505 aa17.61■□□□□ 0.41
TYSND1-204ENST00000494143 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
TYSND1-204ENST00000494143 MAPKBP1O60336 1514 aa17.59■□□□□ 0.41
TYSND1-204ENST00000494143 MSH5O43196 834 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms