RNA–Protein interactions for RNA: ENST00000493126.1

PHF20L1-216, Transcript of PHD finger protein 20 like 1, humanhuman

TSL 2

Gene PHF20L1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20L1-216ENST00000493126 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
PHF20L1-216ENST00000493126 CHIC1Q5VXU3 224 aa26.51■■□□□ 1.83
PHF20L1-216ENST00000493126 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
PHF20L1-216ENST00000493126 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
PHF20L1-216ENST00000493126 NISCHQ9Y2I1 1504 aa22.84■■□□□ 1.25
PHF20L1-216ENST00000493126 FOXD1Q16676 465 aa21.91■■□□□ 1.1
PHF20L1-216ENST00000493126 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
PHF20L1-216ENST00000493126 PPP6R1Q9UPN7 881 aa20.76■□□□□ 0.91
PHF20L1-216ENST00000493126 ADRA2BP18089 450 aa20.67■□□□□ 0.9
PHF20L1-216ENST00000493126 PIAS4Q8N2W9 510 aaPredicted RBP20.49■□□□□ 0.87
PHF20L1-216ENST00000493126 MSH5O43196 834 aa20.31■□□□□ 0.84
PHF20L1-216ENST00000493126 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
PHF20L1-216ENST00000493126 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
PHF20L1-216ENST00000493126 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.65
PHF20L1-216ENST00000493126 ABCC9O60706 1549 aa18.93■□□□□ 0.62
PHF20L1-216ENST00000493126 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
PHF20L1-216ENST00000493126 MAPK8IP2Q13387 824 aaPredicted RBP18.92■□□□□ 0.62
PHF20L1-216ENST00000493126 SCAF1Q9H7N4 1312 aaKnown RBP18.8■□□□□ 0.6
PHF20L1-216ENST00000493126 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
PHF20L1-216ENST00000493126 MYO15BQ96JP2 1530 aa18.77■□□□□ 0.6
PHF20L1-216ENST00000493126 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
PHF20L1-216ENST00000493126 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
PHF20L1-216ENST00000493126 NACADO15069 1562 aa18.61■□□□□ 0.57
PHF20L1-216ENST00000493126 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
PHF20L1-216ENST00000493126 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
PHF20L1-216ENST00000493126 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
PHF20L1-216ENST00000493126 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
PHF20L1-216ENST00000493126 HOXD11P31277 338 aaPredicted RBP18.13■□□□□ 0.49
PHF20L1-216ENST00000493126 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
PHF20L1-216ENST00000493126 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
PHF20L1-216ENST00000493126 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
PHF20L1-216ENST00000493126 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
PHF20L1-216ENST00000493126 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
PHF20L1-216ENST00000493126 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
PHF20L1-216ENST00000493126 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
PHF20L1-216ENST00000493126 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
PHF20L1-216ENST00000493126 KCNA4P22459 653 aa17.77■□□□□ 0.44
PHF20L1-216ENST00000493126 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
PHF20L1-216ENST00000493126 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
PHF20L1-216ENST00000493126 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
PHF20L1-216ENST00000493126 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.41
PHF20L1-216ENST00000493126 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
PHF20L1-216ENST00000493126 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
PHF20L1-216ENST00000493126 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
PHF20L1-216ENST00000493126 WIZO95785 1651 aa17.41■□□□□ 0.38
PHF20L1-216ENST00000493126 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
PHF20L1-216ENST00000493126 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
PHF20L1-216ENST00000493126 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
PHF20L1-216ENST00000493126 NCAPD3P42695 1498 aa17.26■□□□□ 0.35
PHF20L1-216ENST00000493126 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
PHF20L1-216ENST00000493126 SMARCA2P51531 1590 aa17.25■□□□□ 0.35
PHF20L1-216ENST00000493126 TOP2AP11388 1531 aaKnown RBP17.25■□□□□ 0.35
PHF20L1-216ENST00000493126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
PHF20L1-216ENST00000493126 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
PHF20L1-216ENST00000493126 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
PHF20L1-216ENST00000493126 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
PHF20L1-216ENST00000493126 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
PHF20L1-216ENST00000493126 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
PHF20L1-216ENST00000493126 SLC4A2P04920 1241 aa17■□□□□ 0.31
PHF20L1-216ENST00000493126 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
PHF20L1-216ENST00000493126 CFTRP13569 1480 aa16.81■□□□□ 0.28
PHF20L1-216ENST00000493126 CADPSQ9ULU8 1353 aa16.78■□□□□ 0.28
PHF20L1-216ENST00000493126 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
PHF20L1-216ENST00000493126 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
PHF20L1-216ENST00000493126 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
PHF20L1-216ENST00000493126 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
PHF20L1-216ENST00000493126 NESP48681 1621 aa16.62■□□□□ 0.25
PHF20L1-216ENST00000493126 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
PHF20L1-216ENST00000493126 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
PHF20L1-216ENST00000493126 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
PHF20L1-216ENST00000493126 CAPN15O75808 1086 aa16.52■□□□□ 0.24
PHF20L1-216ENST00000493126 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
PHF20L1-216ENST00000493126 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
PHF20L1-216ENST00000493126 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
PHF20L1-216ENST00000493126 CUX1P39880 1505 aa16.48■□□□□ 0.23
PHF20L1-216ENST00000493126 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
PHF20L1-216ENST00000493126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
PHF20L1-216ENST00000493126 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
PHF20L1-216ENST00000493126 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
PHF20L1-216ENST00000493126 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
PHF20L1-216ENST00000493126 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
PHF20L1-216ENST00000493126 DSG3P32926 999 aa16.41■□□□□ 0.22
PHF20L1-216ENST00000493126 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
PHF20L1-216ENST00000493126 ZBTB22O15209 634 aa16.39■□□□□ 0.21
PHF20L1-216ENST00000493126 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
PHF20L1-216ENST00000493126 SOGA1O94964 1423 aa16.37■□□□□ 0.21
PHF20L1-216ENST00000493126 APLP2Q06481 763 aa16.36■□□□□ 0.21
PHF20L1-216ENST00000493126 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
PHF20L1-216ENST00000493126 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
PHF20L1-216ENST00000493126 RUSC2Q8N2Y8 1516 aa16.34■□□□□ 0.21
PHF20L1-216ENST00000493126 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
PHF20L1-216ENST00000493126 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
PHF20L1-216ENST00000493126 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
PHF20L1-216ENST00000493126 LOC105371045A0A1W2PR82 267 aa16.3■□□□□ 0.2
PHF20L1-216ENST00000493126 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
PHF20L1-216ENST00000493126 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
PHF20L1-216ENST00000493126 EEA1Q15075 1411 aa16.28■□□□□ 0.2
PHF20L1-216ENST00000493126 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
PHF20L1-216ENST00000493126 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
PHF20L1-216ENST00000493126 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms