RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 AEBP2Q6ZN18 517 aaPredicted RBP30.4■■■□□ 2.46
NCKAP1-206ENST00000492058 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
NCKAP1-206ENST00000492058 SENP3Q9H4L4 574 aaPredicted RBP26.17■■□□□ 1.78
NCKAP1-206ENST00000492058 PHF23Q9BUL5 403 aaPredicted RBP25.72■■□□□ 1.71
NCKAP1-206ENST00000492058 FOXD1Q16676 465 aa24.31■■□□□ 1.48
NCKAP1-206ENST00000492058 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
NCKAP1-206ENST00000492058 MSH5O43196 834 aa22.99■■□□□ 1.27
NCKAP1-206ENST00000492058 PLPPR3Q6T4P5 718 aa22.89■■□□□ 1.25
NCKAP1-206ENST00000492058 POTEDQ86YR6 584 aa22.79■■□□□ 1.24
NCKAP1-206ENST00000492058 PIAS4Q8N2W9 510 aaPredicted RBP22.74■■□□□ 1.23
NCKAP1-206ENST00000492058 PPP6R1Q9UPN7 881 aa22.46■■□□□ 1.19
NCKAP1-206ENST00000492058 ADRA2BP18089 450 aa22.42■■□□□ 1.18
NCKAP1-206ENST00000492058 ABCC9O60706 1549 aa21.56■■□□□ 1.04
NCKAP1-206ENST00000492058 CCDC180Q9P1Z9 1646 aa20.87■□□□□ 0.93
NCKAP1-206ENST00000492058 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
NCKAP1-206ENST00000492058 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
NCKAP1-206ENST00000492058 MAPK8IP2Q13387 824 aaPredicted RBP20.65■□□□□ 0.9
NCKAP1-206ENST00000492058 DMRT2Q9Y5R5 561 aa20.65■□□□□ 0.9
NCKAP1-206ENST00000492058 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
NCKAP1-206ENST00000492058 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
NCKAP1-206ENST00000492058 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
NCKAP1-206ENST00000492058 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
NCKAP1-206ENST00000492058 NACADO15069 1562 aa19.92■□□□□ 0.78
NCKAP1-206ENST00000492058 DCAF8L1A6NGE4 600 aa19.92■□□□□ 0.78
NCKAP1-206ENST00000492058 CACNB1Q02641 598 aaPredicted RBP19.89■□□□□ 0.77
NCKAP1-206ENST00000492058 HOXD11P31277 338 aaPredicted RBP19.77■□□□□ 0.76
NCKAP1-206ENST00000492058 CNKSR2Q8WXI2 1034 aa19.71■□□□□ 0.75
NCKAP1-206ENST00000492058 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
NCKAP1-206ENST00000492058 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
NCKAP1-206ENST00000492058 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
NCKAP1-206ENST00000492058 RNF39Q9H2S5 420 aa19.5■□□□□ 0.71
NCKAP1-206ENST00000492058 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
NCKAP1-206ENST00000492058 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
NCKAP1-206ENST00000492058 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
NCKAP1-206ENST00000492058 C1QBPQ07021 282 aaKnown RBP19.28■□□□□ 0.68
NCKAP1-206ENST00000492058 DNAJC5Q9H3Z4 198 aa19.28■□□□□ 0.68
NCKAP1-206ENST00000492058 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
NCKAP1-206ENST00000492058 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
NCKAP1-206ENST00000492058 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
NCKAP1-206ENST00000492058 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
NCKAP1-206ENST00000492058 ZCCHC6Q5VYS8 1495 aaKnown RBP19.08■□□□□ 0.64
NCKAP1-206ENST00000492058 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
NCKAP1-206ENST00000492058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.62
NCKAP1-206ENST00000492058 NPM3O75607 178 aaKnown RBP18.81■□□□□ 0.6
NCKAP1-206ENST00000492058 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
NCKAP1-206ENST00000492058 CUX2O14529 1486 aa18.64■□□□□ 0.57
NCKAP1-206ENST00000492058 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
NCKAP1-206ENST00000492058 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
NCKAP1-206ENST00000492058 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
NCKAP1-206ENST00000492058 NESP48681 1621 aa18.38■□□□□ 0.53
NCKAP1-206ENST00000492058 ATAD2BQ9ULI0 1458 aa18.34■□□□□ 0.53
NCKAP1-206ENST00000492058 CAPN15O75808 1086 aa18.3■□□□□ 0.52
NCKAP1-206ENST00000492058 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
NCKAP1-206ENST00000492058 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
NCKAP1-206ENST00000492058 KCNA4P22459 653 aa18.19■□□□□ 0.5
NCKAP1-206ENST00000492058 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
NCKAP1-206ENST00000492058 DSG3P32926 999 aa18.17■□□□□ 0.5
NCKAP1-206ENST00000492058 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
NCKAP1-206ENST00000492058 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
NCKAP1-206ENST00000492058 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
NCKAP1-206ENST00000492058 APLP2Q06481 763 aa18.08■□□□□ 0.48
NCKAP1-206ENST00000492058 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
NCKAP1-206ENST00000492058 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
NCKAP1-206ENST00000492058 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
NCKAP1-206ENST00000492058 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
NCKAP1-206ENST00000492058 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
NCKAP1-206ENST00000492058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
NCKAP1-206ENST00000492058 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
NCKAP1-206ENST00000492058 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
NCKAP1-206ENST00000492058 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
NCKAP1-206ENST00000492058 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
NCKAP1-206ENST00000492058 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
NCKAP1-206ENST00000492058 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
NCKAP1-206ENST00000492058 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
NCKAP1-206ENST00000492058 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
NCKAP1-206ENST00000492058 POTEHQ6S545 545 aa17.86■□□□□ 0.45
NCKAP1-206ENST00000492058 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
NCKAP1-206ENST00000492058 WDR62O43379 1518 aa17.8■□□□□ 0.44
NCKAP1-206ENST00000492058 ABCB7O75027 752 aa17.78■□□□□ 0.44
NCKAP1-206ENST00000492058 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
NCKAP1-206ENST00000492058 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
NCKAP1-206ENST00000492058 WIZO95785 1651 aa17.66■□□□□ 0.42
NCKAP1-206ENST00000492058 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
NCKAP1-206ENST00000492058 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
NCKAP1-206ENST00000492058 CFTRP13569 1480 aa17.56■□□□□ 0.4
NCKAP1-206ENST00000492058 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
NCKAP1-206ENST00000492058 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
NCKAP1-206ENST00000492058 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
NCKAP1-206ENST00000492058 MYCNP04198 464 aaPredicted RBP17.49■□□□□ 0.39
NCKAP1-206ENST00000492058 RBM42Q9BTD8 480 aaKnown RBP17.49■□□□□ 0.39
NCKAP1-206ENST00000492058 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
NCKAP1-206ENST00000492058 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
NCKAP1-206ENST00000492058 FBLN2P98095 1184 aa17.43■□□□□ 0.38
NCKAP1-206ENST00000492058 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
NCKAP1-206ENST00000492058 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.38
NCKAP1-206ENST00000492058 POLA2Q14181 598 aa17.36■□□□□ 0.37
NCKAP1-206ENST00000492058 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
NCKAP1-206ENST00000492058 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.361e-8■■■■■ 40.5
NCKAP1-206ENST00000492058 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
NCKAP1-206ENST00000492058 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms