RNA–Protein interactions for RNA: ENST00000491998.5

DFFB-211, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,152 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-211ENST00000491998 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
DFFB-211ENST00000491998 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
DFFB-211ENST00000491998 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
DFFB-211ENST00000491998 MYT1Q01538 1121 aa19.89■□□□□ 0.78
DFFB-211ENST00000491998 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
DFFB-211ENST00000491998 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
DFFB-211ENST00000491998 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
DFFB-211ENST00000491998 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
DFFB-211ENST00000491998 HRCP23327 699 aa19.22■□□□□ 0.67
DFFB-211ENST00000491998 ABCC9O60706 1549 aa19.14■□□□□ 0.66
DFFB-211ENST00000491998 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
DFFB-211ENST00000491998 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
DFFB-211ENST00000491998 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
DFFB-211ENST00000491998 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
DFFB-211ENST00000491998 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
DFFB-211ENST00000491998 PRKCSHP14314 528 aaPredicted RBP18.89■□□□□ 0.62
DFFB-211ENST00000491998 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
DFFB-211ENST00000491998 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
DFFB-211ENST00000491998 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
DFFB-211ENST00000491998 NACADO15069 1562 aa18.65■□□□□ 0.58
DFFB-211ENST00000491998 LOC105371045A0A1W2PR82 267 aa18.59■□□□□ 0.57
DFFB-211ENST00000491998 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
DFFB-211ENST00000491998 BCL11AQ9H165 835 aa18.48■□□□□ 0.55
DFFB-211ENST00000491998 ERICH6Q7L0X2 663 aa18.36■□□□□ 0.53
DFFB-211ENST00000491998 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
DFFB-211ENST00000491998 APLP2Q06481 763 aa18.31■□□□□ 0.52
DFFB-211ENST00000491998 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
DFFB-211ENST00000491998 UNC13AQ9UPW8 1703 aa18.25■□□□□ 0.51
DFFB-211ENST00000491998 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
DFFB-211ENST00000491998 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
DFFB-211ENST00000491998 SLC24A1O60721 1099 aa18.12■□□□□ 0.49
DFFB-211ENST00000491998 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
DFFB-211ENST00000491998 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
DFFB-211ENST00000491998 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
DFFB-211ENST00000491998 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
DFFB-211ENST00000491998 MROH2BQ7Z745 1585 aa17.99■□□□□ 0.47
DFFB-211ENST00000491998 CENPBP07199 599 aaPredicted RBP17.9■□□□□ 0.46
DFFB-211ENST00000491998 WIZO95785 1651 aa17.86■□□□□ 0.45
DFFB-211ENST00000491998 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
DFFB-211ENST00000491998 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
DFFB-211ENST00000491998 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
DFFB-211ENST00000491998 NEUROD1Q13562 356 aa17.76■□□□□ 0.43
DFFB-211ENST00000491998 ACIN1Q9UKV3 1341 aaKnown RBP17.75■□□□□ 0.43
DFFB-211ENST00000491998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
DFFB-211ENST00000491998 GTF3C3Q9Y5Q9 886 aa17.7■□□□□ 0.42
DFFB-211ENST00000491998 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
DFFB-211ENST00000491998 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
DFFB-211ENST00000491998 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
DFFB-211ENST00000491998 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
DFFB-211ENST00000491998 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
DFFB-211ENST00000491998 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
DFFB-211ENST00000491998 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
DFFB-211ENST00000491998 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
DFFB-211ENST00000491998 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
DFFB-211ENST00000491998 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
DFFB-211ENST00000491998 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
DFFB-211ENST00000491998 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.37
DFFB-211ENST00000491998 DAXXQ9UER7 740 aaPredicted RBP17.38■□□□□ 0.37
DFFB-211ENST00000491998 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
DFFB-211ENST00000491998 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
DFFB-211ENST00000491998 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
DFFB-211ENST00000491998 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
DFFB-211ENST00000491998 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
DFFB-211ENST00000491998 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
DFFB-211ENST00000491998 ZNF316A6NFI3 1004 aaPredicted RBP17.18■□□□□ 0.34
DFFB-211ENST00000491998 MIER1Q8N108 512 aa17.15■□□□□ 0.34
DFFB-211ENST00000491998 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
DFFB-211ENST00000491998 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
DFFB-211ENST00000491998 UBE2Q2Q8WVN8 375 aa17.06■□□□□ 0.32
DFFB-211ENST00000491998 SOGA1O94964 1423 aa17.03■□□□□ 0.32
DFFB-211ENST00000491998 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
DFFB-211ENST00000491998 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
DFFB-211ENST00000491998 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
DFFB-211ENST00000491998 UBTFP17480 764 aaKnown RBP16.99■□□□□ 0.31
DFFB-211ENST00000491998 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
DFFB-211ENST00000491998 SYNJ1O43426 1573 aa16.95■□□□□ 0.3
DFFB-211ENST00000491998 CFTRP13569 1480 aa16.95■□□□□ 0.3
DFFB-211ENST00000491998 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
DFFB-211ENST00000491998 NESP48681 1621 aa16.87■□□□□ 0.29
DFFB-211ENST00000491998 RANGAP1P46060 587 aaPredicted RBP16.84■□□□□ 0.29
DFFB-211ENST00000491998 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.28
DFFB-211ENST00000491998 TSHZ2Q9NRE2 1034 aa16.81■□□□□ 0.28
DFFB-211ENST00000491998 CUX1P39880 1505 aa16.79■□□□□ 0.28
DFFB-211ENST00000491998 SALL2Q9Y467 1007 aaPredicted RBP16.79■□□□□ 0.28
DFFB-211ENST00000491998 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
DFFB-211ENST00000491998 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
DFFB-211ENST00000491998 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
DFFB-211ENST00000491998 PODXL2Q9NZ53 605 aa16.77■□□□□ 0.27
DFFB-211ENST00000491998 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
DFFB-211ENST00000491998 PKNOX2Q96KN3 472 aa16.73■□□□□ 0.27
DFFB-211ENST00000491998 BIVM-ERCC5R4GMW8 1640 aa16.72■□□□□ 0.27
DFFB-211ENST00000491998 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
DFFB-211ENST00000491998 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
DFFB-211ENST00000491998 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
DFFB-211ENST00000491998 EEA1Q15075 1411 aa16.61■□□□□ 0.25
DFFB-211ENST00000491998 BCANQ96GW7 911 aa16.61■□□□□ 0.25
DFFB-211ENST00000491998 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
DFFB-211ENST00000491998 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
DFFB-211ENST00000491998 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
DFFB-211ENST00000491998 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 271.7 ms