RNA–Protein interactions for RNA: ENST00000490363.3

KCNT1-210, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 5

Gene KCNT1, Length 4,065 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-210ENST00000490363 NISCHQ9Y2I1 1504 aa26.11■■□□□ 1.77
KCNT1-210ENST00000490363 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
KCNT1-210ENST00000490363 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
KCNT1-210ENST00000490363 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
KCNT1-210ENST00000490363 ABCC9O60706 1549 aa22.47■■□□□ 1.19
KCNT1-210ENST00000490363 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
KCNT1-210ENST00000490363 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
KCNT1-210ENST00000490363 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
KCNT1-210ENST00000490363 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
KCNT1-210ENST00000490363 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.01
KCNT1-210ENST00000490363 SCRIBQ14160 1630 aa21.36■■□□□ 1.01
KCNT1-210ENST00000490363 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
KCNT1-210ENST00000490363 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
KCNT1-210ENST00000490363 NACADO15069 1562 aa20.97■□□□□ 0.95
KCNT1-210ENST00000490363 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
KCNT1-210ENST00000490363 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
KCNT1-210ENST00000490363 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
KCNT1-210ENST00000490363 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
KCNT1-210ENST00000490363 TTBK1Q5TCY1 1321 aaPredicted RBP20.68■□□□□ 0.9
KCNT1-210ENST00000490363 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
KCNT1-210ENST00000490363 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
KCNT1-210ENST00000490363 UBTFP17480 764 aaKnown RBP20.61■□□□□ 0.89
KCNT1-210ENST00000490363 PCGF6Q9BYE7 350 aa20.53■□□□□ 0.88
KCNT1-210ENST00000490363 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
KCNT1-210ENST00000490363 PPARGC1BQ86YN6 1023 aaKnown RBP20.42■□□□□ 0.86
KCNT1-210ENST00000490363 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
KCNT1-210ENST00000490363 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
KCNT1-210ENST00000490363 APLP2Q06481 763 aa20.33■□□□□ 0.85
KCNT1-210ENST00000490363 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
KCNT1-210ENST00000490363 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
KCNT1-210ENST00000490363 WIZO95785 1651 aa20.07■□□□□ 0.8
KCNT1-210ENST00000490363 FBLN2P98095 1184 aa20■□□□□ 0.79
KCNT1-210ENST00000490363 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
KCNT1-210ENST00000490363 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
KCNT1-210ENST00000490363 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
KCNT1-210ENST00000490363 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
KCNT1-210ENST00000490363 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
KCNT1-210ENST00000490363 P3H3Q8IVL6 736 aa19.85■□□□□ 0.77
KCNT1-210ENST00000490363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
KCNT1-210ENST00000490363 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
KCNT1-210ENST00000490363 HRCP23327 699 aa19.83■□□□□ 0.76
KCNT1-210ENST00000490363 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
KCNT1-210ENST00000490363 BICRAQ9NZM4 1560 aa19.8■□□□□ 0.76
KCNT1-210ENST00000490363 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
KCNT1-210ENST00000490363 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
KCNT1-210ENST00000490363 ITGAEP38570 1179 aa19.75■□□□□ 0.75
KCNT1-210ENST00000490363 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
KCNT1-210ENST00000490363 TOP2AP11388 1531 aaKnown RBP19.72■□□□□ 0.75
KCNT1-210ENST00000490363 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
KCNT1-210ENST00000490363 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
KCNT1-210ENST00000490363 ARID3CA6NKF2 412 aa19.7■□□□□ 0.74
KCNT1-210ENST00000490363 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
KCNT1-210ENST00000490363 SOGA1O94964 1423 aa19.6■□□□□ 0.73
KCNT1-210ENST00000490363 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
KCNT1-210ENST00000490363 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.72
KCNT1-210ENST00000490363 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
KCNT1-210ENST00000490363 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
KCNT1-210ENST00000490363 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
KCNT1-210ENST00000490363 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
KCNT1-210ENST00000490363 TDRD9Q8NDG6 1382 aaKnown RBP19.42■□□□□ 0.7
KCNT1-210ENST00000490363 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
KCNT1-210ENST00000490363 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
KCNT1-210ENST00000490363 CUX2O14529 1486 aa19.39■□□□□ 0.69
KCNT1-210ENST00000490363 FAM50AQ14320 339 aaKnown RBP19.39■□□□□ 0.69
KCNT1-210ENST00000490363 NESP48681 1621 aa19.37■□□□□ 0.69
KCNT1-210ENST00000490363 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
KCNT1-210ENST00000490363 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
KCNT1-210ENST00000490363 MYT1Q01538 1121 aa19.33■□□□□ 0.68
KCNT1-210ENST00000490363 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
KCNT1-210ENST00000490363 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
KCNT1-210ENST00000490363 CLIP1P30622 1438 aa19.27■□□□□ 0.68
KCNT1-210ENST00000490363 EEA1Q15075 1411 aa19.27■□□□□ 0.68
KCNT1-210ENST00000490363 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
KCNT1-210ENST00000490363 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
KCNT1-210ENST00000490363 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
KCNT1-210ENST00000490363 GOLGA3Q08378 1498 aa19.24■□□□□ 0.67
KCNT1-210ENST00000490363 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
KCNT1-210ENST00000490363 CENPBP07199 599 aaPredicted RBP19.2■□□□□ 0.66
KCNT1-210ENST00000490363 CFTRP13569 1480 aa19.17■□□□□ 0.66
KCNT1-210ENST00000490363 HMGXB3Q12766 1538 aa19.16■□□□□ 0.66
KCNT1-210ENST00000490363 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
KCNT1-210ENST00000490363 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
KCNT1-210ENST00000490363 ZNF777Q9ULD5 760 aaPredicted RBP19.15■□□□□ 0.66
KCNT1-210ENST00000490363 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.65
KCNT1-210ENST00000490363 RAPGEF2Q9Y4G8 1499 aa19.05■□□□□ 0.64
KCNT1-210ENST00000490363 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.64
KCNT1-210ENST00000490363 SYNJ1O43426 1573 aa19.02■□□□□ 0.63
KCNT1-210ENST00000490363 TRIM52Q96A61 297 aa19■□□□□ 0.63
KCNT1-210ENST00000490363 CDK11AQ9UQ88 783 aaPredicted RBP19■□□□□ 0.63
KCNT1-210ENST00000490363 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.63
KCNT1-210ENST00000490363 IGF1RP08069 1367 aa18.97■□□□□ 0.63
KCNT1-210ENST00000490363 KCNH8Q96L42 1107 aa18.97■□□□□ 0.63
KCNT1-210ENST00000490363 CHIC2Q9UKJ5 165 aa18.96■□□□□ 0.63
KCNT1-210ENST00000490363 MTUS2Q5JR59 1369 aa18.95■□□□□ 0.62
KCNT1-210ENST00000490363 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
KCNT1-210ENST00000490363 GTF3C3Q9Y5Q9 886 aa18.93■□□□□ 0.62
KCNT1-210ENST00000490363 CUX1P39880 1505 aa18.93■□□□□ 0.62
KCNT1-210ENST00000490363 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
KCNT1-210ENST00000490363 NPM1P06748 294 aaKnown RBP eCLIP18.9■□□□□ 0.62
KCNT1-210ENST00000490363 KANK4Q5T7N3 995 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms