RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 NISCHQ9Y2I1 1504 aa27.1■■□□□ 1.93
TNXB-206ENST00000490077 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
TNXB-206ENST00000490077 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
TNXB-206ENST00000490077 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
TNXB-206ENST00000490077 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
TNXB-206ENST00000490077 ZCCHC6Q5VYS8 1495 aaKnown RBP22.88■■□□□ 1.25
TNXB-206ENST00000490077 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
TNXB-206ENST00000490077 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.22
TNXB-206ENST00000490077 LOC105371045A0A1W2PR82 267 aa22.37■■□□□ 1.17
TNXB-206ENST00000490077 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
TNXB-206ENST00000490077 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
TNXB-206ENST00000490077 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.14
TNXB-206ENST00000490077 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
TNXB-206ENST00000490077 ABCC9O60706 1549 aa22.03■■□□□ 1.12
TNXB-206ENST00000490077 HRCP23327 699 aa21.99■■□□□ 1.11
TNXB-206ENST00000490077 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.1
TNXB-206ENST00000490077 SCRIBQ14160 1630 aa21.83■■□□□ 1.09
TNXB-206ENST00000490077 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
TNXB-206ENST00000490077 NACADO15069 1562 aa21.68■■□□□ 1.06
TNXB-206ENST00000490077 TRIM41Q8WV44 630 aa21.58■■□□□ 1.04
TNXB-206ENST00000490077 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
TNXB-206ENST00000490077 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
TNXB-206ENST00000490077 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
TNXB-206ENST00000490077 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
TNXB-206ENST00000490077 TTBK1Q5TCY1 1321 aaPredicted RBP21.27■□□□□ 0.99
TNXB-206ENST00000490077 WIZO95785 1651 aa21.21■□□□□ 0.99
TNXB-206ENST00000490077 UNC13AQ9UPW8 1703 aa21.1■□□□□ 0.97
TNXB-206ENST00000490077 PABPN1Q86U42 306 aaKnown RBP eCLIP21.05■□□□□ 0.96
TNXB-206ENST00000490077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
TNXB-206ENST00000490077 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
TNXB-206ENST00000490077 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
TNXB-206ENST00000490077 CCDC88BA6NC98 1476 aa20.85■□□□□ 0.93
TNXB-206ENST00000490077 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
TNXB-206ENST00000490077 SOGA1O94964 1423 aa20.79■□□□□ 0.92
TNXB-206ENST00000490077 RUSC2Q8N2Y8 1516 aa20.79■□□□□ 0.92
TNXB-206ENST00000490077 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
TNXB-206ENST00000490077 RANGAP1P46060 587 aaPredicted RBP20.71■□□□□ 0.91
TNXB-206ENST00000490077 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
TNXB-206ENST00000490077 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
TNXB-206ENST00000490077 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
TNXB-206ENST00000490077 SMARCA2P51531 1590 aa20.58■□□□□ 0.89
TNXB-206ENST00000490077 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.88
TNXB-206ENST00000490077 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
TNXB-206ENST00000490077 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
TNXB-206ENST00000490077 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
TNXB-206ENST00000490077 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
TNXB-206ENST00000490077 HNRNPUL2Q1KMD3 747 aaKnown RBP20.42■□□□□ 0.86
TNXB-206ENST00000490077 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
TNXB-206ENST00000490077 NEUROD1Q13562 356 aa20.33■□□□□ 0.84
TNXB-206ENST00000490077 ATAD2BQ9ULI0 1458 aa20.32■□□□□ 0.84
TNXB-206ENST00000490077 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
TNXB-206ENST00000490077 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
TNXB-206ENST00000490077 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
TNXB-206ENST00000490077 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
TNXB-206ENST00000490077 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
TNXB-206ENST00000490077 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
TNXB-206ENST00000490077 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
TNXB-206ENST00000490077 GOLGA3Q08378 1498 aa20.12■□□□□ 0.81
TNXB-206ENST00000490077 CLIP1P30622 1438 aa20.09■□□□□ 0.81
TNXB-206ENST00000490077 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
TNXB-206ENST00000490077 GTF3C3Q9Y5Q9 886 aa20.06■□□□□ 0.8
TNXB-206ENST00000490077 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
TNXB-206ENST00000490077 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
TNXB-206ENST00000490077 HMGXB3Q12766 1538 aa20.02■□□□□ 0.8
TNXB-206ENST00000490077 MIER1Q8N108 512 aa20■□□□□ 0.79
TNXB-206ENST00000490077 EEA1Q15075 1411 aa19.97■□□□□ 0.79
TNXB-206ENST00000490077 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
TNXB-206ENST00000490077 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
TNXB-206ENST00000490077 ITGAEP38570 1179 aa19.95■□□□□ 0.78
TNXB-206ENST00000490077 APLP2Q06481 763 aa19.9■□□□□ 0.78
TNXB-206ENST00000490077 KIF21BO75037 1637 aa19.89■□□□□ 0.77
TNXB-206ENST00000490077 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
TNXB-206ENST00000490077 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
TNXB-206ENST00000490077 P3H3Q8IVL6 736 aa19.79■□□□□ 0.76
TNXB-206ENST00000490077 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
TNXB-206ENST00000490077 CUX1P39880 1505 aa19.77■□□□□ 0.76
TNXB-206ENST00000490077 TOP2BQ02880 1626 aa19.74■□□□□ 0.75
TNXB-206ENST00000490077 CFTRP13569 1480 aa19.71■□□□□ 0.75
TNXB-206ENST00000490077 PRXQ9BXM0 1461 aa19.69■□□□□ 0.74
TNXB-206ENST00000490077 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
TNXB-206ENST00000490077 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
TNXB-206ENST00000490077 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
TNXB-206ENST00000490077 KCNH8Q96L42 1107 aa19.65■□□□□ 0.74
TNXB-206ENST00000490077 DNAJC5BQ9UF47 199 aa19.61■□□□□ 0.73
TNXB-206ENST00000490077 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
TNXB-206ENST00000490077 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
TNXB-206ENST00000490077 ARHGAP35Q9NRY4 1499 aa19.58■□□□□ 0.73
TNXB-206ENST00000490077 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.72
TNXB-206ENST00000490077 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
TNXB-206ENST00000490077 IGF1RP08069 1367 aa19.55■□□□□ 0.72
TNXB-206ENST00000490077 PRDM2Q13029 1718 aa19.55■□□□□ 0.72
TNXB-206ENST00000490077 CUX2O14529 1486 aa19.55■□□□□ 0.72
TNXB-206ENST00000490077 SIN3AQ96ST3 1273 aa19.54■□□□□ 0.72
TNXB-206ENST00000490077 FAM50AQ14320 339 aaKnown RBP19.49■□□□□ 0.71
TNXB-206ENST00000490077 NESP48681 1621 aa19.45■□□□□ 0.7
TNXB-206ENST00000490077 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
TNXB-206ENST00000490077 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
TNXB-206ENST00000490077 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
TNXB-206ENST00000490077 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
TNXB-206ENST00000490077 CARMIL1Q5VZK9 1371 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms