RNA–Protein interactions for RNA: ENST00000489476.5

TPRKB-209, Transcript of TP53RK binding protein, humanhuman

TSL 5

Gene TPRKB, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKB-209ENST00000489476 AEBP2Q6ZN18 517 aaPredicted RBP27.44■■□□□ 1.98
TPRKB-209ENST00000489476 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
TPRKB-209ENST00000489476 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
TPRKB-209ENST00000489476 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
TPRKB-209ENST00000489476 PLPPR3Q6T4P5 718 aa21.89■■□□□ 1.09
TPRKB-209ENST00000489476 FOXD1Q16676 465 aa21.61■■□□□ 1.05
TPRKB-209ENST00000489476 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.93
TPRKB-209ENST00000489476 PPP6R1Q9UPN7 881 aa20.8■□□□□ 0.92
TPRKB-209ENST00000489476 ADRA2BP18089 450 aa20.76■□□□□ 0.91
TPRKB-209ENST00000489476 PIAS4Q8N2W9 510 aaPredicted RBP20.39■□□□□ 0.85
TPRKB-209ENST00000489476 ABCC9O60706 1549 aa20.19■□□□□ 0.82
TPRKB-209ENST00000489476 MSH5O43196 834 aa20■□□□□ 0.79
TPRKB-209ENST00000489476 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
TPRKB-209ENST00000489476 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
TPRKB-209ENST00000489476 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
TPRKB-209ENST00000489476 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
TPRKB-209ENST00000489476 DNAJC5Q9H3Z4 198 aa18.94■□□□□ 0.62
TPRKB-209ENST00000489476 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
TPRKB-209ENST00000489476 KCNA4P22459 653 aa18.8■□□□□ 0.6
TPRKB-209ENST00000489476 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
TPRKB-209ENST00000489476 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
TPRKB-209ENST00000489476 CNKSR2Q8WXI2 1034 aa18.76■□□□□ 0.59
TPRKB-209ENST00000489476 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
TPRKB-209ENST00000489476 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
TPRKB-209ENST00000489476 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
TPRKB-209ENST00000489476 RNF216Q9NWF9 866 aaPredicted RBP18.39■□□□□ 0.53
TPRKB-209ENST00000489476 NACADO15069 1562 aa18.38■□□□□ 0.53
TPRKB-209ENST00000489476 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
TPRKB-209ENST00000489476 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
TPRKB-209ENST00000489476 CECR2Q9BXF3 1484 aa18.29■□□□□ 0.52
TPRKB-209ENST00000489476 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
TPRKB-209ENST00000489476 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
TPRKB-209ENST00000489476 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
TPRKB-209ENST00000489476 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
TPRKB-209ENST00000489476 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
TPRKB-209ENST00000489476 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
TPRKB-209ENST00000489476 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
TPRKB-209ENST00000489476 CUX2O14529 1486 aa17.82■□□□□ 0.44
TPRKB-209ENST00000489476 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
TPRKB-209ENST00000489476 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
TPRKB-209ENST00000489476 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
TPRKB-209ENST00000489476 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
TPRKB-209ENST00000489476 SCRIBQ14160 1630 aa17.44■□□□□ 0.38
TPRKB-209ENST00000489476 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
TPRKB-209ENST00000489476 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
TPRKB-209ENST00000489476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.374e-8■□□□□ 10.6
TPRKB-209ENST00000489476 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
TPRKB-209ENST00000489476 ZBTB22O15209 634 aa17.29■□□□□ 0.36
TPRKB-209ENST00000489476 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
TPRKB-209ENST00000489476 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
TPRKB-209ENST00000489476 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
TPRKB-209ENST00000489476 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
TPRKB-209ENST00000489476 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
TPRKB-209ENST00000489476 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
TPRKB-209ENST00000489476 ZCCHC6Q5VYS8 1495 aaKnown RBP17.03■□□□□ 0.32
TPRKB-209ENST00000489476 NESP48681 1621 aa17.01■□□□□ 0.31
TPRKB-209ENST00000489476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
TPRKB-209ENST00000489476 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
TPRKB-209ENST00000489476 C1QBPQ07021 282 aaKnown RBP16.95■□□□□ 0.3
TPRKB-209ENST00000489476 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
TPRKB-209ENST00000489476 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
TPRKB-209ENST00000489476 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
TPRKB-209ENST00000489476 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
TPRKB-209ENST00000489476 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
TPRKB-209ENST00000489476 ATXN8OSP0DMR3 200 aa16.83■□□□□ 0.28
TPRKB-209ENST00000489476 APLP2Q06481 763 aa16.83■□□□□ 0.28
TPRKB-209ENST00000489476 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
TPRKB-209ENST00000489476 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
TPRKB-209ENST00000489476 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
TPRKB-209ENST00000489476 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
TPRKB-209ENST00000489476 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
TPRKB-209ENST00000489476 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
TPRKB-209ENST00000489476 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
TPRKB-209ENST00000489476 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
TPRKB-209ENST00000489476 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
TPRKB-209ENST00000489476 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
TPRKB-209ENST00000489476 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
TPRKB-209ENST00000489476 WDR62O43379 1518 aa16.59■□□□□ 0.25
TPRKB-209ENST00000489476 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.24
TPRKB-209ENST00000489476 ARHGEF11O15085 1522 aa16.56■□□□□ 0.24
TPRKB-209ENST00000489476 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
TPRKB-209ENST00000489476 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
TPRKB-209ENST00000489476 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
TPRKB-209ENST00000489476 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
TPRKB-209ENST00000489476 CAPN15O75808 1086 aa16.5■□□□□ 0.23
TPRKB-209ENST00000489476 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
TPRKB-209ENST00000489476 ILDR1Q86SU0 546 aaPredicted RBP16.42■□□□□ 0.22
TPRKB-209ENST00000489476 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
TPRKB-209ENST00000489476 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
TPRKB-209ENST00000489476 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
TPRKB-209ENST00000489476 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
TPRKB-209ENST00000489476 DSG3P32926 999 aa16.28■□□□□ 0.2
TPRKB-209ENST00000489476 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
TPRKB-209ENST00000489476 POLA2Q14181 598 aa16.2■□□□□ 0.18
TPRKB-209ENST00000489476 ABCB7O75027 752 aa16.15■□□□□ 0.18
TPRKB-209ENST00000489476 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
TPRKB-209ENST00000489476 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
TPRKB-209ENST00000489476 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
TPRKB-209ENST00000489476 CHD1O14646 1710 aa16.09■□□□□ 0.17
TPRKB-209ENST00000489476 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms