RNA–Protein interactions for RNA: ENST00000488830.6

WIPF1-216, Transcript of WAS/WASL interacting protein family member 1, humanhuman

TSL 5

Gene WIPF1, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF1-216ENST00000488830 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
WIPF1-216ENST00000488830 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
WIPF1-216ENST00000488830 NISCHQ9Y2I1 1504 aa18.45■□□□□ 0.54
WIPF1-216ENST00000488830 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
WIPF1-216ENST00000488830 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
WIPF1-216ENST00000488830 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
WIPF1-216ENST00000488830 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
WIPF1-216ENST00000488830 FOXD1Q16676 465 aa16.1■□□□□ 0.17
WIPF1-216ENST00000488830 ADRA2BP18089 450 aa16.03■□□□□ 0.16
WIPF1-216ENST00000488830 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
WIPF1-216ENST00000488830 KCNA4P22459 653 aa15.55■□□□□ 0.08
WIPF1-216ENST00000488830 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
WIPF1-216ENST00000488830 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
WIPF1-216ENST00000488830 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
WIPF1-216ENST00000488830 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
WIPF1-216ENST00000488830 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
WIPF1-216ENST00000488830 MYO15BQ96JP2 1530 aa15.15■□□□□ 0.02
WIPF1-216ENST00000488830 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
WIPF1-216ENST00000488830 ABCC9O60706 1549 aa15.01□□□□□ -0.01
WIPF1-216ENST00000488830 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
WIPF1-216ENST00000488830 NACADO15069 1562 aa14.98□□□□□ -0.01
WIPF1-216ENST00000488830 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
WIPF1-216ENST00000488830 SHROOM4Q9ULL8 1493 aa14.93□□□□□ -0.02
WIPF1-216ENST00000488830 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
WIPF1-216ENST00000488830 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
WIPF1-216ENST00000488830 SCRIBQ14160 1630 aa14.74□□□□□ -0.05
WIPF1-216ENST00000488830 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
WIPF1-216ENST00000488830 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
WIPF1-216ENST00000488830 MSH5O43196 834 aa14.65□□□□□ -0.06
WIPF1-216ENST00000488830 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
WIPF1-216ENST00000488830 UNC13AQ9UPW8 1703 aa14.56□□□□□ -0.08
WIPF1-216ENST00000488830 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
WIPF1-216ENST00000488830 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
WIPF1-216ENST00000488830 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
WIPF1-216ENST00000488830 ZBTB22O15209 634 aa14.29□□□□□ -0.12
WIPF1-216ENST00000488830 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
WIPF1-216ENST00000488830 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.12
WIPF1-216ENST00000488830 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
WIPF1-216ENST00000488830 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
WIPF1-216ENST00000488830 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
WIPF1-216ENST00000488830 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
WIPF1-216ENST00000488830 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
WIPF1-216ENST00000488830 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
WIPF1-216ENST00000488830 WIZO95785 1651 aa14.12□□□□□ -0.15
WIPF1-216ENST00000488830 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
WIPF1-216ENST00000488830 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
WIPF1-216ENST00000488830 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
WIPF1-216ENST00000488830 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
WIPF1-216ENST00000488830 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
WIPF1-216ENST00000488830 SMARCA2P51531 1590 aa13.96□□□□□ -0.18
WIPF1-216ENST00000488830 EIF4G1Q04637 1599 aaKnown RBP13.9□□□□□ -0.18
WIPF1-216ENST00000488830 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
WIPF1-216ENST00000488830 BAZ1BQ9UIG0 1483 aaKnown RBP13.83□□□□□ -0.2
WIPF1-216ENST00000488830 HMGXB3Q12766 1538 aa13.83□□□□□ -0.2
WIPF1-216ENST00000488830 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
WIPF1-216ENST00000488830 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
WIPF1-216ENST00000488830 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
WIPF1-216ENST00000488830 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
WIPF1-216ENST00000488830 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
WIPF1-216ENST00000488830 TRIM41Q8WV44 630 aa13.6□□□□□ -0.23
WIPF1-216ENST00000488830 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
WIPF1-216ENST00000488830 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
WIPF1-216ENST00000488830 ABCC8Q09428 1581 aa13.54□□□□□ -0.24
WIPF1-216ENST00000488830 CFTRP13569 1480 aa13.48□□□□□ -0.25
WIPF1-216ENST00000488830 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
WIPF1-216ENST00000488830 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
WIPF1-216ENST00000488830 BIVM-ERCC5R4GMW8 1640 aa13.44□□□□□ -0.26
WIPF1-216ENST00000488830 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
WIPF1-216ENST00000488830 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
WIPF1-216ENST00000488830 EEA1Q15075 1411 aa13.4□□□□□ -0.26
WIPF1-216ENST00000488830 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
WIPF1-216ENST00000488830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.27
WIPF1-216ENST00000488830 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
WIPF1-216ENST00000488830 FKBP8Q14318 412 aa13.33□□□□□ -0.28
WIPF1-216ENST00000488830 CUX1P39880 1505 aa13.3□□□□□ -0.28
WIPF1-216ENST00000488830 LOC105371045A0A1W2PR82 267 aa13.28□□□□□ -0.28
WIPF1-216ENST00000488830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
WIPF1-216ENST00000488830 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
WIPF1-216ENST00000488830 SOGA1O94964 1423 aa13.26□□□□□ -0.29
WIPF1-216ENST00000488830 FAM9AQ8IZU1 332 aaPredicted RBP13.26□□□□□ -0.29
WIPF1-216ENST00000488830 FANCD2Q9BXW9 1451 aa13.25□□□□□ -0.29
WIPF1-216ENST00000488830 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
WIPF1-216ENST00000488830 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
WIPF1-216ENST00000488830 KIF21BO75037 1637 aa13.23□□□□□ -0.29
WIPF1-216ENST00000488830 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
WIPF1-216ENST00000488830 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
WIPF1-216ENST00000488830 NESP48681 1621 aa13.2□□□□□ -0.3
WIPF1-216ENST00000488830 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
WIPF1-216ENST00000488830 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
WIPF1-216ENST00000488830 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
WIPF1-216ENST00000488830 PDS5BQ9NTI5 1447 aa13.18□□□□□ -0.3
WIPF1-216ENST00000488830 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
WIPF1-216ENST00000488830 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
WIPF1-216ENST00000488830 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.3
WIPF1-216ENST00000488830 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
WIPF1-216ENST00000488830 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
WIPF1-216ENST00000488830 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
WIPF1-216ENST00000488830 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
WIPF1-216ENST00000488830 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
WIPF1-216ENST00000488830 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms