RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
SCAP-212ENST00000487942 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
SCAP-212ENST00000487942 SENP3Q9H4L4 574 aaPredicted RBP19.1■□□□□ 0.65
SCAP-212ENST00000487942 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
SCAP-212ENST00000487942 NISCHQ9Y2I1 1504 aa18.63■□□□□ 0.57
SCAP-212ENST00000487942 FOXD1Q16676 465 aa17.85■□□□□ 0.45
SCAP-212ENST00000487942 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
SCAP-212ENST00000487942 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
SCAP-212ENST00000487942 ADRA2BP18089 450 aa16.81■□□□□ 0.28
SCAP-212ENST00000487942 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
SCAP-212ENST00000487942 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
SCAP-212ENST00000487942 MSH5O43196 834 aa16.57■□□□□ 0.24
SCAP-212ENST00000487942 ABCC9O60706 1549 aa16.55■□□□□ 0.24
SCAP-212ENST00000487942 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
SCAP-212ENST00000487942 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
SCAP-212ENST00000487942 NACADO15069 1562 aa15.7■□□□□ 0.1
SCAP-212ENST00000487942 DCAF8L2P0C7V8 631 aa15.64■□□□□ 0.09
SCAP-212ENST00000487942 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
SCAP-212ENST00000487942 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
SCAP-212ENST00000487942 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
SCAP-212ENST00000487942 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
SCAP-212ENST00000487942 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
SCAP-212ENST00000487942 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
SCAP-212ENST00000487942 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
SCAP-212ENST00000487942 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
SCAP-212ENST00000487942 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
SCAP-212ENST00000487942 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
SCAP-212ENST00000487942 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
SCAP-212ENST00000487942 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
SCAP-212ENST00000487942 SHROOM4Q9ULL8 1493 aa15.06■□□□□ 0
SCAP-212ENST00000487942 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
SCAP-212ENST00000487942 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
SCAP-212ENST00000487942 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
SCAP-212ENST00000487942 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
SCAP-212ENST00000487942 HOXD11P31277 338 aaPredicted RBP14.69□□□□□ -0.06
SCAP-212ENST00000487942 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
SCAP-212ENST00000487942 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
SCAP-212ENST00000487942 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
SCAP-212ENST00000487942 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
SCAP-212ENST00000487942 NCAPD3P42695 1498 aa14.47□□□□□ -0.09
SCAP-212ENST00000487942 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
SCAP-212ENST00000487942 BAZ1AQ9NRL2 1556 aaPredicted RBP14.44□□□□□ -0.1
SCAP-212ENST00000487942 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
SCAP-212ENST00000487942 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
SCAP-212ENST00000487942 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
SCAP-212ENST00000487942 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
SCAP-212ENST00000487942 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
SCAP-212ENST00000487942 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
SCAP-212ENST00000487942 KCNA4P22459 653 aa14.31□□□□□ -0.12
SCAP-212ENST00000487942 NESP48681 1621 aa14.29□□□□□ -0.12
SCAP-212ENST00000487942 WIZO95785 1651 aa14.28□□□□□ -0.12
SCAP-212ENST00000487942 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
SCAP-212ENST00000487942 KIF21AQ7Z4S6 1674 aa14.18□□□□□ -0.14
SCAP-212ENST00000487942 RNF39Q9H2S5 420 aa14.18□□□□□ -0.14
SCAP-212ENST00000487942 CACNB1Q02641 598 aaPredicted RBP14.17□□□□□ -0.14
SCAP-212ENST00000487942 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
SCAP-212ENST00000487942 CUX2O14529 1486 aa14.15□□□□□ -0.14
SCAP-212ENST00000487942 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
SCAP-212ENST00000487942 RSF1Q96T23 1441 aaPredicted RBP14.09□□□□□ -0.15
SCAP-212ENST00000487942 CADPSQ9ULU8 1353 aa14.03□□□□□ -0.16
SCAP-212ENST00000487942 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
SCAP-212ENST00000487942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
SCAP-212ENST00000487942 PDS5BQ9NTI5 1447 aa14.01□□□□□ -0.17
SCAP-212ENST00000487942 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
SCAP-212ENST00000487942 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
SCAP-212ENST00000487942 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
SCAP-212ENST00000487942 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
SCAP-212ENST00000487942 CFTRP13569 1480 aa13.92□□□□□ -0.18
SCAP-212ENST00000487942 WDR62O43379 1518 aa13.91□□□□□ -0.18
SCAP-212ENST00000487942 FANCD2Q9BXW9 1451 aa13.9□□□□□ -0.18
SCAP-212ENST00000487942 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
SCAP-212ENST00000487942 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
SCAP-212ENST00000487942 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
SCAP-212ENST00000487942 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
SCAP-212ENST00000487942 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
SCAP-212ENST00000487942 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
SCAP-212ENST00000487942 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
SCAP-212ENST00000487942 ZNF608Q9ULD9 1512 aaPredicted RBP13.63□□□□□ -0.23
SCAP-212ENST00000487942 IFT140Q96RY7 1462 aa13.6□□□□□ -0.23
SCAP-212ENST00000487942 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.23
SCAP-212ENST00000487942 ABCC8Q09428 1581 aa13.58□□□□□ -0.23
SCAP-212ENST00000487942 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
SCAP-212ENST00000487942 SUPT5HO00267 1087 aaKnown RBP13.57□□□□□ -0.24
SCAP-212ENST00000487942 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
SCAP-212ENST00000487942 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
SCAP-212ENST00000487942 CHD1O14646 1710 aa13.53□□□□□ -0.24
SCAP-212ENST00000487942 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.25
SCAP-212ENST00000487942 CUX1P39880 1505 aa13.51□□□□□ -0.25
SCAP-212ENST00000487942 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
SCAP-212ENST00000487942 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCAP-212ENST00000487942 RAD54L2Q9Y4B4 1467 aa13.5□□□□□ -0.25
SCAP-212ENST00000487942 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
SCAP-212ENST00000487942 CAPN15O75808 1086 aa13.48□□□□□ -0.25
SCAP-212ENST00000487942 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
SCAP-212ENST00000487942 WDR97A6NE52 1622 aa13.46□□□□□ -0.26
SCAP-212ENST00000487942 SOGA1O94964 1423 aa13.45□□□□□ -0.26
SCAP-212ENST00000487942 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
SCAP-212ENST00000487942 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
SCAP-212ENST00000487942 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
SCAP-212ENST00000487942 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms