RNA–Protein interactions for RNA: ENST00000487605.1

FGD5-205, Transcript of FYVE, RhoGEF and PH domain containing 5, humanhuman

TSL 2

Gene FGD5, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD5-205ENST00000487605 NISCHQ9Y2I1 1504 aa22.58■■□□□ 1.21
FGD5-205ENST00000487605 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
FGD5-205ENST00000487605 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
FGD5-205ENST00000487605 SHROOM4Q9ULL8 1493 aa18.91■□□□□ 0.62
FGD5-205ENST00000487605 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
FGD5-205ENST00000487605 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.57
FGD5-205ENST00000487605 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
FGD5-205ENST00000487605 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
FGD5-205ENST00000487605 HRCP23327 699 aa18.5■□□□□ 0.55
FGD5-205ENST00000487605 MYT1Q01538 1121 aa18.23■□□□□ 0.51
FGD5-205ENST00000487605 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
FGD5-205ENST00000487605 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
FGD5-205ENST00000487605 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
FGD5-205ENST00000487605 ABCC9O60706 1549 aa17.95■□□□□ 0.46
FGD5-205ENST00000487605 NACADO15069 1562 aa17.93■□□□□ 0.46
FGD5-205ENST00000487605 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
FGD5-205ENST00000487605 PCGF6Q9BYE7 350 aa17.79■□□□□ 0.44
FGD5-205ENST00000487605 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
FGD5-205ENST00000487605 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
FGD5-205ENST00000487605 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
FGD5-205ENST00000487605 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
FGD5-205ENST00000487605 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
FGD5-205ENST00000487605 ZEB1P37275 1124 aaPredicted RBP17.42■□□□□ 0.38
FGD5-205ENST00000487605 WIZO95785 1651 aa17.4■□□□□ 0.38
FGD5-205ENST00000487605 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.37
FGD5-205ENST00000487605 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
FGD5-205ENST00000487605 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
FGD5-205ENST00000487605 TRIM41Q8WV44 630 aa17.34■□□□□ 0.37
FGD5-205ENST00000487605 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.36
FGD5-205ENST00000487605 TTBK1Q5TCY1 1321 aaPredicted RBP17.25■□□□□ 0.35
FGD5-205ENST00000487605 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
FGD5-205ENST00000487605 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
FGD5-205ENST00000487605 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
FGD5-205ENST00000487605 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
FGD5-205ENST00000487605 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
FGD5-205ENST00000487605 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
FGD5-205ENST00000487605 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
FGD5-205ENST00000487605 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
FGD5-205ENST00000487605 CENPBP07199 599 aaPredicted RBP17.03■□□□□ 0.32
FGD5-205ENST00000487605 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
FGD5-205ENST00000487605 NEUROD1Q13562 356 aa17■□□□□ 0.31
FGD5-205ENST00000487605 GTF3C3Q9Y5Q9 886 aa16.99■□□□□ 0.31
FGD5-205ENST00000487605 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
FGD5-205ENST00000487605 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
FGD5-205ENST00000487605 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
FGD5-205ENST00000487605 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
FGD5-205ENST00000487605 EEA1Q15075 1411 aa16.76■□□□□ 0.27
FGD5-205ENST00000487605 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
FGD5-205ENST00000487605 SOGA1O94964 1423 aa16.7■□□□□ 0.26
FGD5-205ENST00000487605 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
FGD5-205ENST00000487605 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
FGD5-205ENST00000487605 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
FGD5-205ENST00000487605 TNIKQ9UKE5 1360 aa16.66■□□□□ 0.26
FGD5-205ENST00000487605 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
FGD5-205ENST00000487605 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
FGD5-205ENST00000487605 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
FGD5-205ENST00000487605 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
FGD5-205ENST00000487605 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
FGD5-205ENST00000487605 NCAPD3P42695 1498 aa16.55■□□□□ 0.24
FGD5-205ENST00000487605 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
FGD5-205ENST00000487605 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
FGD5-205ENST00000487605 KIF21BO75037 1637 aa16.51■□□□□ 0.23
FGD5-205ENST00000487605 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
FGD5-205ENST00000487605 TOP2BQ02880 1626 aa16.48■□□□□ 0.23
FGD5-205ENST00000487605 ANP32EQ9BTT0 268 aa16.47■□□□□ 0.23
FGD5-205ENST00000487605 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
FGD5-205ENST00000487605 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
FGD5-205ENST00000487605 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
FGD5-205ENST00000487605 CFTRP13569 1480 aa16.35■□□□□ 0.21
FGD5-205ENST00000487605 CLIP1P30622 1438 aa16.33■□□□□ 0.2
FGD5-205ENST00000487605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
FGD5-205ENST00000487605 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
FGD5-205ENST00000487605 YTHDC1Q96MU7 727 aaKnown RBP16.31■□□□□ 0.2
FGD5-205ENST00000487605 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
FGD5-205ENST00000487605 CUX1P39880 1505 aa16.31■□□□□ 0.2
FGD5-205ENST00000487605 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
FGD5-205ENST00000487605 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
FGD5-205ENST00000487605 PRKCSHP14314 528 aaPredicted RBP16.26■□□□□ 0.19
FGD5-205ENST00000487605 VPS8Q8N3P4 1428 aa16.26■□□□□ 0.19
FGD5-205ENST00000487605 PRXQ9BXM0 1461 aa16.25■□□□□ 0.19
FGD5-205ENST00000487605 KIF27Q86VH2 1401 aa16.22■□□□□ 0.19
FGD5-205ENST00000487605 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
FGD5-205ENST00000487605 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
FGD5-205ENST00000487605 APLP2Q06481 763 aa16.17■□□□□ 0.18
FGD5-205ENST00000487605 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
FGD5-205ENST00000487605 TSHZ2Q9NRE2 1034 aa16.14■□□□□ 0.17
FGD5-205ENST00000487605 SUPT16HQ9Y5B9 1047 aaKnown RBP16.11■□□□□ 0.17
FGD5-205ENST00000487605 MIER1Q8N108 512 aa16.1■□□□□ 0.17
FGD5-205ENST00000487605 ARAP1Q96P48 1450 aa16.09■□□□□ 0.17
FGD5-205ENST00000487605 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
FGD5-205ENST00000487605 CUX2O14529 1486 aa16.05■□□□□ 0.16
FGD5-205ENST00000487605 IGF1RP08069 1367 aa16.04■□□□□ 0.16
FGD5-205ENST00000487605 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
FGD5-205ENST00000487605 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.15
FGD5-205ENST00000487605 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
FGD5-205ENST00000487605 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
FGD5-205ENST00000487605 CARMIL1Q5VZK9 1371 aa15.97■□□□□ 0.15
FGD5-205ENST00000487605 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
FGD5-205ENST00000487605 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
FGD5-205ENST00000487605 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms