RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 NISCHQ9Y2I1 1504 aa11.22□□□□□ -0.61
RAB3GAP1-204ENST00000487003 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
RAB3GAP1-204ENST00000487003 ABCC9O60706 1549 aa9.87□□□□□ -0.83
RAB3GAP1-204ENST00000487003 SHROOM4Q9ULL8 1493 aa9.86□□□□□ -0.83
RAB3GAP1-204ENST00000487003 SUPT5HO00267 1087 aaKnown RBP9.57□□□□□ -0.88
RAB3GAP1-204ENST00000487003 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
RAB3GAP1-204ENST00000487003 CCDC180Q9P1Z9 1646 aa9.52□□□□□ -0.89
RAB3GAP1-204ENST00000487003 ZCCHC6Q5VYS8 1495 aaKnown RBP9.29□□□□□ -0.92
RAB3GAP1-204ENST00000487003 SCRIBQ14160 1630 aa9.24□□□□□ -0.93
RAB3GAP1-204ENST00000487003 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
RAB3GAP1-204ENST00000487003 NACADO15069 1562 aa9.13□□□□□ -0.95
RAB3GAP1-204ENST00000487003 EHMT2Q96KQ7 1210 aa9.1□□□□□ -0.95
RAB3GAP1-204ENST00000487003 FAM9AQ8IZU1 332 aaPredicted RBP8.97□□□□□ -0.97
RAB3GAP1-204ENST00000487003 DCAF1Q9Y4B6 1507 aa8.96□□□□□ -0.97
RAB3GAP1-204ENST00000487003 CECR2Q9BXF3 1484 aa8.9□□□□□ -0.99
RAB3GAP1-204ENST00000487003 TRIM41Q8WV44 630 aa8.86□□□□□ -0.99
RAB3GAP1-204ENST00000487003 MYO15BQ96JP2 1530 aa8.85□□□□□ -0.99
RAB3GAP1-204ENST00000487003 RANGAP1P46060 587 aaPredicted RBP8.84□□□□□ -0.99
RAB3GAP1-204ENST00000487003 DNAJC5BQ9UF47 199 aa8.79□□□□□ -1
RAB3GAP1-204ENST00000487003 RSF1Q96T23 1441 aaPredicted RBP8.77□□□□□ -1
RAB3GAP1-204ENST00000487003 MROH2BQ7Z745 1585 aa8.74□□□□□ -1.01
RAB3GAP1-204ENST00000487003 BAZ1BQ9UIG0 1483 aaKnown RBP8.73□□□□□ -1.01
RAB3GAP1-204ENST00000487003 BAZ1AQ9NRL2 1556 aaPredicted RBP8.71□□□□□ -1.02
RAB3GAP1-204ENST00000487003 TTBK1Q5TCY1 1321 aaPredicted RBP8.7□□□□□ -1.02
RAB3GAP1-204ENST00000487003 BICRAQ9NZM4 1560 aa8.68□□□□□ -1.02
RAB3GAP1-204ENST00000487003 FBLN2P98095 1184 aa8.67□□□□□ -1.02
RAB3GAP1-204ENST00000487003 CHIC1Q5VXU3 224 aa8.67□□□□□ -1.02
RAB3GAP1-204ENST00000487003 UBTFP17480 764 aaKnown RBP8.66□□□□□ -1.02
RAB3GAP1-204ENST00000487003 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
RAB3GAP1-204ENST00000487003 ATP1B4Q9UN42 357 aaPredicted RBP8.63□□□□□ -1.03
RAB3GAP1-204ENST00000487003 WIZO95785 1651 aa8.63□□□□□ -1.03
RAB3GAP1-204ENST00000487003 ATAD2BQ9ULI0 1458 aa8.62□□□□□ -1.03
RAB3GAP1-204ENST00000487003 UNC13AQ9UPW8 1703 aa8.62□□□□□ -1.03
RAB3GAP1-204ENST00000487003 ERCC6Q03468 1493 aa8.59□□□□□ -1.03
RAB3GAP1-204ENST00000487003 SMARCA4P51532 1647 aa8.59□□□□□ -1.03
RAB3GAP1-204ENST00000487003 SMARCA2P51531 1590 aa8.58□□□□□ -1.04
RAB3GAP1-204ENST00000487003 LOC105371045A0A1W2PR82 267 aa8.58□□□□□ -1.04
RAB3GAP1-204ENST00000487003 CC2D2AQ9P2K1 1620 aa8.57□□□□□ -1.04
RAB3GAP1-204ENST00000487003 CCDC88BA6NC98 1476 aa8.54□□□□□ -1.04
RAB3GAP1-204ENST00000487003 APLP2Q06481 763 aa8.49□□□□□ -1.05
RAB3GAP1-204ENST00000487003 PPARGC1BQ86YN6 1023 aaKnown RBP8.49□□□□□ -1.05
RAB3GAP1-204ENST00000487003 NCAPD3P42695 1498 aa8.48□□□□□ -1.05
RAB3GAP1-204ENST00000487003 CADPSQ9ULU8 1353 aa8.48□□□□□ -1.05
RAB3GAP1-204ENST00000487003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.47□□□□□ -1.05
RAB3GAP1-204ENST00000487003 HNRNPUL2Q1KMD3 747 aaKnown RBP8.47□□□□□ -1.05
RAB3GAP1-204ENST00000487003 NESP48681 1621 aa8.47□□□□□ -1.05
RAB3GAP1-204ENST00000487003 TOP2AP11388 1531 aaKnown RBP8.46□□□□□ -1.05
RAB3GAP1-204ENST00000487003 P3H3Q8IVL6 736 aa8.46□□□□□ -1.06
RAB3GAP1-204ENST00000487003 PDS5BQ9NTI5 1447 aa8.44□□□□□ -1.06
RAB3GAP1-204ENST00000487003 ARID3CA6NKF2 412 aa8.43□□□□□ -1.06
RAB3GAP1-204ENST00000487003 WRNQ14191 1432 aaPredicted RBP eCLIP8.42□□□□□ -1.06
RAB3GAP1-204ENST00000487003 CHMP7Q8WUX9 453 aaPredicted RBP8.42□□□□□ -1.06
RAB3GAP1-204ENST00000487003 CSRNP3Q8WYN3 585 aa8.42□□□□□ -1.06
RAB3GAP1-204ENST00000487003 ABCC8Q09428 1581 aa8.4□□□□□ -1.06
RAB3GAP1-204ENST00000487003 TDRD9Q8NDG6 1382 aaKnown RBP8.38□□□□□ -1.07
RAB3GAP1-204ENST00000487003 FANCD2Q9BXW9 1451 aa8.38□□□□□ -1.07
RAB3GAP1-204ENST00000487003 CEP164Q9UPV0 1460 aa8.36□□□□□ -1.07
RAB3GAP1-204ENST00000487003 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
RAB3GAP1-204ENST00000487003 SOGA1O94964 1423 aa8.32□□□□□ -1.08
RAB3GAP1-204ENST00000487003 CUX2O14529 1486 aa8.31□□□□□ -1.08
RAB3GAP1-204ENST00000487003 MYT1LQ9UL68 1186 aa8.29□□□□□ -1.08
RAB3GAP1-204ENST00000487003 ITGAEP38570 1179 aa8.28□□□□□ -1.08
RAB3GAP1-204ENST00000487003 CFTRP13569 1480 aa8.28□□□□□ -1.08
RAB3GAP1-204ENST00000487003 RAD54L2Q9Y4B4 1467 aa8.27□□□□□ -1.09
RAB3GAP1-204ENST00000487003 KIF27Q86VH2 1401 aa8.27□□□□□ -1.09
RAB3GAP1-204ENST00000487003 AQRO60306 1485 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■■□□□ 11.4
RAB3GAP1-204ENST00000487003 FGD5Q6ZNL6 1462 aa8.23□□□□□ -1.09
RAB3GAP1-204ENST00000487003 PEG3Q9GZU2 1588 aa8.22□□□□□ -1.09
RAB3GAP1-204ENST00000487003 PCGF6Q9BYE7 350 aa8.22□□□□□ -1.09
RAB3GAP1-204ENST00000487003 CARMIL1Q5VZK9 1371 aa8.21□□□□□ -1.09
RAB3GAP1-204ENST00000487003 RUSC2Q8N2Y8 1516 aa8.21□□□□□ -1.1
RAB3GAP1-204ENST00000487003 NPM1P06748 294 aaKnown RBP eCLIP8.2□□□□□ -1.1
RAB3GAP1-204ENST00000487003 MRC2Q9UBG0 1479 aa8.2□□□□□ -1.1
RAB3GAP1-204ENST00000487003 LAMC3Q9Y6N6 1575 aa8.18□□□□□ -1.1
RAB3GAP1-204ENST00000487003 TOPBP1Q92547 1522 aa8.17□□□□□ -1.1
RAB3GAP1-204ENST00000487003 KCNH8Q96L42 1107 aa8.17□□□□□ -1.1
RAB3GAP1-204ENST00000487003 OSCARQ8IYS5 282 aa8.16□□□□□ -1.1
RAB3GAP1-204ENST00000487003 ZNF777Q9ULD5 760 aaPredicted RBP8.16□□□□□ -1.1
RAB3GAP1-204ENST00000487003 CYB5RLQ6IPT4 315 aa8.15□□□□□ -1.1
RAB3GAP1-204ENST00000487003 FAM50AQ14320 339 aaKnown RBP8.15□□□□□ -1.11
RAB3GAP1-204ENST00000487003 POLA1P09884 1462 aaPredicted RBP8.14□□□□□ -1.11
RAB3GAP1-204ENST00000487003 CUX1P39880 1505 aa8.14□□□□□ -1.11
RAB3GAP1-204ENST00000487003 GAPVD1Q14C86 1478 aa8.14□□□□□ -1.11
RAB3GAP1-204ENST00000487003 TRHP20396 242 aaPredicted RBP8.14□□□□□ -1.11
RAB3GAP1-204ENST00000487003 SYNJ1O43426 1573 aa8.14□□□□□ -1.11
RAB3GAP1-204ENST00000487003 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
RAB3GAP1-204ENST00000487003 JPH4Q96JJ6 628 aa8.12□□□□□ -1.11
RAB3GAP1-204ENST00000487003 EEA1Q15075 1411 aa8.11□□□□□ -1.11
RAB3GAP1-204ENST00000487003 ZNF608Q9ULD9 1512 aaPredicted RBP8.11□□□□□ -1.11
RAB3GAP1-204ENST00000487003 GOLGA3Q08378 1498 aa8.1□□□□□ -1.11
RAB3GAP1-204ENST00000487003 CLIP1P30622 1438 aa8.1□□□□□ -1.11
RAB3GAP1-204ENST00000487003 IGF1RP08069 1367 aa8.1□□□□□ -1.11
RAB3GAP1-204ENST00000487003 AEBP2Q6ZN18 517 aaPredicted RBP8.09□□□□□ -1.11
RAB3GAP1-204ENST00000487003 PLPPR3Q6T4P5 718 aa8.08□□□□□ -1.12
RAB3GAP1-204ENST00000487003 DNMBPQ6XZF7 1577 aa8.08□□□□□ -1.12
RAB3GAP1-204ENST00000487003 CDK11AQ9UQ88 783 aaPredicted RBP8.08□□□□□ -1.12
RAB3GAP1-204ENST00000487003 IFT140Q96RY7 1462 aa8.08□□□□□ -1.12
RAB3GAP1-204ENST00000487003 RAPGEF2Q9Y4G8 1499 aa8.08□□□□□ -1.12
RAB3GAP1-204ENST00000487003 KIF21AQ7Z4S6 1674 aa8.07□□□□□ -1.12
RAB3GAP1-204ENST00000487003 CEP162Q5TB80 1403 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms