RNA–Protein interactions for RNA: ENST00000483440.1

VEPH1-213, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 2

Gene VEPH1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-213ENST00000483440 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
VEPH1-213ENST00000483440 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
VEPH1-213ENST00000483440 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
VEPH1-213ENST00000483440 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
VEPH1-213ENST00000483440 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
VEPH1-213ENST00000483440 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
VEPH1-213ENST00000483440 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
VEPH1-213ENST00000483440 FOXD1Q16676 465 aa17.95■□□□□ 0.46
VEPH1-213ENST00000483440 ABCC9O60706 1549 aa17.73■□□□□ 0.43
VEPH1-213ENST00000483440 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
VEPH1-213ENST00000483440 ADRA2BP18089 450 aa17.27■□□□□ 0.36
VEPH1-213ENST00000483440 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
VEPH1-213ENST00000483440 NACADO15069 1562 aa16.97■□□□□ 0.31
VEPH1-213ENST00000483440 DCAF8L2P0C7V8 631 aa16.9■□□□□ 0.3
VEPH1-213ENST00000483440 PIAS4Q8N2W9 510 aaPredicted RBP16.9■□□□□ 0.3
VEPH1-213ENST00000483440 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
VEPH1-213ENST00000483440 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
VEPH1-213ENST00000483440 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
VEPH1-213ENST00000483440 UNC13AQ9UPW8 1703 aa16.51■□□□□ 0.23
VEPH1-213ENST00000483440 MSH5O43196 834 aa16.5■□□□□ 0.23
VEPH1-213ENST00000483440 PABPN1Q86U42 306 aaKnown RBP eCLIP16.5■□□□□ 0.23
VEPH1-213ENST00000483440 SHROOM4Q9ULL8 1493 aa16.4■□□□□ 0.22
VEPH1-213ENST00000483440 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
VEPH1-213ENST00000483440 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
VEPH1-213ENST00000483440 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
VEPH1-213ENST00000483440 EIF4G1Q04637 1599 aaKnown RBP16.06■□□□□ 0.16
VEPH1-213ENST00000483440 CC2D2AQ9P2K1 1620 aa16.04■□□□□ 0.16
VEPH1-213ENST00000483440 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
VEPH1-213ENST00000483440 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
VEPH1-213ENST00000483440 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
VEPH1-213ENST00000483440 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
VEPH1-213ENST00000483440 KCNA4P22459 653 aa15.63■□□□□ 0.09
VEPH1-213ENST00000483440 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
VEPH1-213ENST00000483440 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
VEPH1-213ENST00000483440 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
VEPH1-213ENST00000483440 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
VEPH1-213ENST00000483440 ATAD2BQ9ULI0 1458 aa15.58■□□□□ 0.08
VEPH1-213ENST00000483440 HMGXB3Q12766 1538 aa15.56■□□□□ 0.08
VEPH1-213ENST00000483440 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
VEPH1-213ENST00000483440 BAZ1BQ9UIG0 1483 aaKnown RBP15.5■□□□□ 0.07
VEPH1-213ENST00000483440 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
VEPH1-213ENST00000483440 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
VEPH1-213ENST00000483440 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
VEPH1-213ENST00000483440 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
VEPH1-213ENST00000483440 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
VEPH1-213ENST00000483440 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
VEPH1-213ENST00000483440 CUX2O14529 1486 aa15.3■□□□□ 0.04
VEPH1-213ENST00000483440 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
VEPH1-213ENST00000483440 WIZO95785 1651 aa15.23■□□□□ 0.03
VEPH1-213ENST00000483440 NESP48681 1621 aa15.23■□□□□ 0.03
VEPH1-213ENST00000483440 PDS5BQ9NTI5 1447 aa15.22■□□□□ 0.03
VEPH1-213ENST00000483440 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
VEPH1-213ENST00000483440 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
VEPH1-213ENST00000483440 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
VEPH1-213ENST00000483440 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
VEPH1-213ENST00000483440 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
VEPH1-213ENST00000483440 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
VEPH1-213ENST00000483440 KIF21AQ7Z4S6 1674 aa15.08■□□□□ 0
VEPH1-213ENST00000483440 MRC2Q9UBG0 1479 aa15.03■□□□□ -0
VEPH1-213ENST00000483440 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
VEPH1-213ENST00000483440 CFTRP13569 1480 aa15.01□□□□□ -0.01
VEPH1-213ENST00000483440 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
VEPH1-213ENST00000483440 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
VEPH1-213ENST00000483440 FANCD2Q9BXW9 1451 aa15□□□□□ -0.01
VEPH1-213ENST00000483440 WDR62O43379 1518 aa14.97□□□□□ -0.01
VEPH1-213ENST00000483440 CCDC88BA6NC98 1476 aa14.9□□□□□ -0.02
VEPH1-213ENST00000483440 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
VEPH1-213ENST00000483440 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
VEPH1-213ENST00000483440 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
VEPH1-213ENST00000483440 URB2Q14146 1524 aaKnown RBP14.79□□□□□ -0.04
VEPH1-213ENST00000483440 DCAF8L1A6NGE4 600 aa14.74□□□□□ -0.05
VEPH1-213ENST00000483440 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
VEPH1-213ENST00000483440 TOPBP1Q92547 1522 aa14.71□□□□□ -0.06
VEPH1-213ENST00000483440 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
VEPH1-213ENST00000483440 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
VEPH1-213ENST00000483440 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
VEPH1-213ENST00000483440 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
VEPH1-213ENST00000483440 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
VEPH1-213ENST00000483440 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
VEPH1-213ENST00000483440 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
VEPH1-213ENST00000483440 TARBP1Q13395 1621 aaKnown RBP14.53□□□□□ -0.08
VEPH1-213ENST00000483440 SOGA1O94964 1423 aa14.53□□□□□ -0.08
VEPH1-213ENST00000483440 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
VEPH1-213ENST00000483440 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
VEPH1-213ENST00000483440 AQRO60306 1485 aaKnown RBP eCLIP14.49□□□□□ -0.09
VEPH1-213ENST00000483440 CUX1P39880 1505 aa14.48□□□□□ -0.09
VEPH1-213ENST00000483440 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
VEPH1-213ENST00000483440 RAD54L2Q9Y4B4 1467 aa14.46□□□□□ -0.09
VEPH1-213ENST00000483440 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
VEPH1-213ENST00000483440 FBLN2P98095 1184 aa14.44□□□□□ -0.1
VEPH1-213ENST00000483440 TDRD9Q8NDG6 1382 aaKnown RBP14.43□□□□□ -0.1
VEPH1-213ENST00000483440 GRIN2BQ13224 1484 aa14.41□□□□□ -0.1
VEPH1-213ENST00000483440 MAGI1Q96QZ7 1491 aaPredicted RBP14.41□□□□□ -0.1
VEPH1-213ENST00000483440 ZBTB22O15209 634 aa14.4□□□□□ -0.1
VEPH1-213ENST00000483440 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
VEPH1-213ENST00000483440 CHD1O14646 1710 aa14.39□□□□□ -0.11
VEPH1-213ENST00000483440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.11
VEPH1-213ENST00000483440 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
VEPH1-213ENST00000483440 CHMP7Q8WUX9 453 aaPredicted RBP14.38□□□□□ -0.11
VEPH1-213ENST00000483440 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms