RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-208ENST00000482183 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.97
CAPN8-208ENST00000482183 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
CAPN8-208ENST00000482183 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
CAPN8-208ENST00000482183 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
CAPN8-208ENST00000482183 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
CAPN8-208ENST00000482183 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
CAPN8-208ENST00000482183 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
CAPN8-208ENST00000482183 SUPT5HO00267 1087 aaKnown RBP17.1■□□□□ 0.33
CAPN8-208ENST00000482183 NACADO15069 1562 aa16.96■□□□□ 0.31
CAPN8-208ENST00000482183 ABCC9O60706 1549 aa16.79■□□□□ 0.28
CAPN8-208ENST00000482183 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
CAPN8-208ENST00000482183 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
CAPN8-208ENST00000482183 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
CAPN8-208ENST00000482183 RSF1Q96T23 1441 aaPredicted RBP16.55■□□□□ 0.24
CAPN8-208ENST00000482183 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
CAPN8-208ENST00000482183 MROH2BQ7Z745 1585 aa16.22■□□□□ 0.19
CAPN8-208ENST00000482183 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
CAPN8-208ENST00000482183 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
CAPN8-208ENST00000482183 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
CAPN8-208ENST00000482183 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
CAPN8-208ENST00000482183 WIZO95785 1651 aa16.08■□□□□ 0.17
CAPN8-208ENST00000482183 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
CAPN8-208ENST00000482183 PEG3Q9GZU2 1588 aa15.98■□□□□ 0.15
CAPN8-208ENST00000482183 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
CAPN8-208ENST00000482183 HRCP23327 699 aa15.94■□□□□ 0.14
CAPN8-208ENST00000482183 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
CAPN8-208ENST00000482183 EEA1Q15075 1411 aa15.92■□□□□ 0.14
CAPN8-208ENST00000482183 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
CAPN8-208ENST00000482183 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
CAPN8-208ENST00000482183 CCDC88BA6NC98 1476 aa15.88■□□□□ 0.13
CAPN8-208ENST00000482183 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
CAPN8-208ENST00000482183 PCGF6Q9BYE7 350 aa15.87■□□□□ 0.13
CAPN8-208ENST00000482183 ZEB1P37275 1124 aaPredicted RBP15.84■□□□□ 0.13
CAPN8-208ENST00000482183 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
CAPN8-208ENST00000482183 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
CAPN8-208ENST00000482183 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
CAPN8-208ENST00000482183 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
CAPN8-208ENST00000482183 WRNQ14191 1432 aaPredicted RBP eCLIP15.65■□□□□ 0.1
CAPN8-208ENST00000482183 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
CAPN8-208ENST00000482183 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
CAPN8-208ENST00000482183 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
CAPN8-208ENST00000482183 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
CAPN8-208ENST00000482183 ABCC8Q09428 1581 aa15.58■□□□□ 0.08
CAPN8-208ENST00000482183 GOLGA3Q08378 1498 aa15.56■□□□□ 0.08
CAPN8-208ENST00000482183 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
CAPN8-208ENST00000482183 KIF21BO75037 1637 aa15.49■□□□□ 0.07
CAPN8-208ENST00000482183 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
CAPN8-208ENST00000482183 SOGA1O94964 1423 aa15.45■□□□□ 0.06
CAPN8-208ENST00000482183 UBTFP17480 764 aaKnown RBP15.44■□□□□ 0.06
CAPN8-208ENST00000482183 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
CAPN8-208ENST00000482183 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
CAPN8-208ENST00000482183 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
CAPN8-208ENST00000482183 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
CAPN8-208ENST00000482183 CFTRP13569 1480 aa15.36■□□□□ 0.05
CAPN8-208ENST00000482183 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
CAPN8-208ENST00000482183 APLP2Q06481 763 aa15.33■□□□□ 0.04
CAPN8-208ENST00000482183 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
CAPN8-208ENST00000482183 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
CAPN8-208ENST00000482183 KIF27Q86VH2 1401 aa15.29■□□□□ 0.04
CAPN8-208ENST00000482183 CLIP1P30622 1438 aa15.28■□□□□ 0.04
CAPN8-208ENST00000482183 RUSC2Q8N2Y8 1516 aa15.25■□□□□ 0.03
CAPN8-208ENST00000482183 VPS8Q8N3P4 1428 aa15.25■□□□□ 0.03
CAPN8-208ENST00000482183 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
CAPN8-208ENST00000482183 PRXQ9BXM0 1461 aa15.21■□□□□ 0.03
CAPN8-208ENST00000482183 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
CAPN8-208ENST00000482183 CUX1P39880 1505 aa15.16■□□□□ 0.02
CAPN8-208ENST00000482183 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
CAPN8-208ENST00000482183 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
CAPN8-208ENST00000482183 CC2D2AQ9P2K1 1620 aa15.08■□□□□ 0
CAPN8-208ENST00000482183 CLSPNQ9HAW4 1339 aa15.06■□□□□ 0
CAPN8-208ENST00000482183 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
CAPN8-208ENST00000482183 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
CAPN8-208ENST00000482183 CUX2O14529 1486 aa15.01□□□□□ -0.01
CAPN8-208ENST00000482183 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
CAPN8-208ENST00000482183 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
CAPN8-208ENST00000482183 FHAD1B1AJZ9 1412 aa14.98□□□□□ -0.01
CAPN8-208ENST00000482183 IGF1RP08069 1367 aa14.98□□□□□ -0.01
CAPN8-208ENST00000482183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
CAPN8-208ENST00000482183 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
CAPN8-208ENST00000482183 FGD5Q6ZNL6 1462 aa14.96□□□□□ -0.01
CAPN8-208ENST00000482183 PDS5BQ9NTI5 1447 aa14.94□□□□□ -0.02
CAPN8-208ENST00000482183 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
CAPN8-208ENST00000482183 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
CAPN8-208ENST00000482183 CUL7Q14999 1698 aa14.92□□□□□ -0.02
CAPN8-208ENST00000482183 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
CAPN8-208ENST00000482183 ARHGAP35Q9NRY4 1499 aa14.88□□□□□ -0.03
CAPN8-208ENST00000482183 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
CAPN8-208ENST00000482183 RRBP1Q9P2E9 1410 aaKnown RBP14.87□□□□□ -0.03
CAPN8-208ENST00000482183 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.03
CAPN8-208ENST00000482183 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.04
CAPN8-208ENST00000482183 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
CAPN8-208ENST00000482183 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
CAPN8-208ENST00000482183 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
CAPN8-208ENST00000482183 CCNB3Q8WWL7 1395 aa14.8□□□□□ -0.04
CAPN8-208ENST00000482183 FMN1Q68DA7 1419 aa14.8□□□□□ -0.04
CAPN8-208ENST00000482183 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
CAPN8-208ENST00000482183 RANGAP1P46060 587 aaPredicted RBP14.78□□□□□ -0.04
CAPN8-208ENST00000482183 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
CAPN8-208ENST00000482183 TIAM1Q13009 1591 aa14.77□□□□□ -0.04
CAPN8-208ENST00000482183 FYCO1Q9BQS8 1478 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms