RNA–Protein interactions for RNA: ENST00000481526.5

CNOT10-216, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 1 (best)

Gene CNOT10, Length 756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-216ENST00000481526 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
CNOT10-216ENST00000481526 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
CNOT10-216ENST00000481526 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
CNOT10-216ENST00000481526 PHF23Q9BUL5 403 aaPredicted RBP16.2■□□□□ 0.18
CNOT10-216ENST00000481526 POTEDQ86YR6 584 aa15.91■□□□□ 0.14
CNOT10-216ENST00000481526 FOXD1Q16676 465 aa15.52■□□□□ 0.08
CNOT10-216ENST00000481526 MSH5O43196 834 aa14.85□□□□□ -0.03
CNOT10-216ENST00000481526 PIAS4Q8N2W9 510 aaPredicted RBP14.31□□□□□ -0.12
CNOT10-216ENST00000481526 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
CNOT10-216ENST00000481526 ADRA2BP18089 450 aa13.77□□□□□ -0.21
CNOT10-216ENST00000481526 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
CNOT10-216ENST00000481526 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
CNOT10-216ENST00000481526 NISCHQ9Y2I1 1504 aa13.07□□□□□ -0.32
CNOT10-216ENST00000481526 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
CNOT10-216ENST00000481526 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
CNOT10-216ENST00000481526 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
CNOT10-216ENST00000481526 ABCC9O60706 1549 aa12.6□□□□□ -0.39
CNOT10-216ENST00000481526 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
CNOT10-216ENST00000481526 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
CNOT10-216ENST00000481526 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
CNOT10-216ENST00000481526 C1QBPQ07021 282 aaKnown RBP12.35□□□□□ -0.43
CNOT10-216ENST00000481526 POTEHQ6S545 545 aa12.3□□□□□ -0.44
CNOT10-216ENST00000481526 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
CNOT10-216ENST00000481526 DNAJC5Q9H3Z4 198 aa11.95□□□□□ -0.5
CNOT10-216ENST00000481526 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
CNOT10-216ENST00000481526 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
CNOT10-216ENST00000481526 PPP4R3CPQ6ZMV5 832 aa11.79□□□□□ -0.52
CNOT10-216ENST00000481526 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
CNOT10-216ENST00000481526 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
CNOT10-216ENST00000481526 RB1CC1Q8TDY2 1594 aa11.66□□□□□ -0.54
CNOT10-216ENST00000481526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
CNOT10-216ENST00000481526 DSG3P32926 999 aa11.5□□□□□ -0.57
CNOT10-216ENST00000481526 NACADO15069 1562 aa11.46□□□□□ -0.57
CNOT10-216ENST00000481526 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
CNOT10-216ENST00000481526 CECR2Q9BXF3 1484 aa11.43□□□□□ -0.58
CNOT10-216ENST00000481526 CAPN15O75808 1086 aa11.39□□□□□ -0.59
CNOT10-216ENST00000481526 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
CNOT10-216ENST00000481526 UNC13AQ9UPW8 1703 aa11.35□□□□□ -0.59
CNOT10-216ENST00000481526 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.6
CNOT10-216ENST00000481526 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
CNOT10-216ENST00000481526 DCAF8L2P0C7V8 631 aa11.24□□□□□ -0.61
CNOT10-216ENST00000481526 SHROOM4Q9ULL8 1493 aa11.17□□□□□ -0.62
CNOT10-216ENST00000481526 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
CNOT10-216ENST00000481526 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
CNOT10-216ENST00000481526 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
CNOT10-216ENST00000481526 CUX2O14529 1486 aa11.13□□□□□ -0.63
CNOT10-216ENST00000481526 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
CNOT10-216ENST00000481526 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
CNOT10-216ENST00000481526 ABCB7O75027 752 aa11.06□□□□□ -0.64
CNOT10-216ENST00000481526 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
CNOT10-216ENST00000481526 TRHP20396 242 aaPredicted RBP11.01□□□□□ -0.65
CNOT10-216ENST00000481526 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
CNOT10-216ENST00000481526 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
CNOT10-216ENST00000481526 NPM3O75607 178 aaKnown RBP10.91□□□□□ -0.66
CNOT10-216ENST00000481526 APLP2Q06481 763 aa10.86□□□□□ -0.67
CNOT10-216ENST00000481526 ERCC6Q03468 1493 aa10.86□□□□□ -0.67
CNOT10-216ENST00000481526 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
CNOT10-216ENST00000481526 DCAF1Q9Y4B6 1507 aa10.76□□□□□ -0.69
CNOT10-216ENST00000481526 HAX1O00165 279 aa10.7□□□□□ -0.7
CNOT10-216ENST00000481526 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
CNOT10-216ENST00000481526 NESP48681 1621 aa10.68□□□□□ -0.7
CNOT10-216ENST00000481526 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
CNOT10-216ENST00000481526 THOC2Q8NI27 1593 aaKnown RBP10.65□□□□□ -0.7
CNOT10-216ENST00000481526 PIP4P2Q8N4L2 257 aa10.65□□□□□ -0.7
CNOT10-216ENST00000481526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.64□□□□□ -0.71
CNOT10-216ENST00000481526 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
CNOT10-216ENST00000481526 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
CNOT10-216ENST00000481526 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
CNOT10-216ENST00000481526 SAMD1Q6SPF0 538 aaPredicted RBP10.55□□□□□ -0.72
CNOT10-216ENST00000481526 OSCARQ8IYS5 282 aa10.54□□□□□ -0.72
CNOT10-216ENST00000481526 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
CNOT10-216ENST00000481526 POLA2Q14181 598 aa10.52□□□□□ -0.73
CNOT10-216ENST00000481526 PLSCR2Q9NRY7 297 aa10.51□□□□□ -0.73
CNOT10-216ENST00000481526 EVX2Q03828 476 aa10.5□□□□□ -0.73
CNOT10-216ENST00000481526 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
CNOT10-216ENST00000481526 SMARCA2P51531 1590 aa10.47□□□□□ -0.73
CNOT10-216ENST00000481526 HMGXB3Q12766 1538 aa10.46□□□□□ -0.74
CNOT10-216ENST00000481526 LHX8Q68G74 356 aa10.45□□□□□ -0.74
CNOT10-216ENST00000481526 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
CNOT10-216ENST00000481526 BAZ1AQ9NRL2 1556 aaPredicted RBP10.43□□□□□ -0.74
CNOT10-216ENST00000481526 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
CNOT10-216ENST00000481526 PDS5BQ9NTI5 1447 aa10.41□□□□□ -0.74
CNOT10-216ENST00000481526 RIMBP3CA6NJZ7 1639 aa10.4□□□□□ -0.74
CNOT10-216ENST00000481526 RIMBP3BA6NNM3 1639 aa10.4□□□□□ -0.74
CNOT10-216ENST00000481526 RIMBP3Q9UFD9 1639 aa10.4□□□□□ -0.74
CNOT10-216ENST00000481526 KIF21AQ7Z4S6 1674 aa10.4□□□□□ -0.74
CNOT10-216ENST00000481526 PITPNM1O00562 1244 aa10.38□□□□□ -0.75
CNOT10-216ENST00000481526 WDR62O43379 1518 aa10.38□□□□□ -0.75
CNOT10-216ENST00000481526 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
CNOT10-216ENST00000481526 ARHGEF11O15085 1522 aa10.35□□□□□ -0.75
CNOT10-216ENST00000481526 CYB5RLQ6IPT4 315 aa10.33□□□□□ -0.76
CNOT10-216ENST00000481526 BAZ1BQ9UIG0 1483 aaKnown RBP10.31□□□□□ -0.76
CNOT10-216ENST00000481526 CADPSQ9ULU8 1353 aa10.3□□□□□ -0.76
CNOT10-216ENST00000481526 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
CNOT10-216ENST00000481526 SMARCA4P51532 1647 aa10.28□□□□□ -0.76
CNOT10-216ENST00000481526 PEG3Q9GZU2 1588 aa10.24□□□□□ -0.77
CNOT10-216ENST00000481526 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
CNOT10-216ENST00000481526 ZBTB12Q9Y330 459 aaPredicted RBP10.22□□□□□ -0.77
CNOT10-216ENST00000481526 GABBR2O75899 941 aa10.21□□□□□ -0.77
CNOT10-216ENST00000481526 CEP164Q9UPV0 1460 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms