RNA–Protein interactions for RNA: ENST00000479575.1

ITSN2-212, Transcript of intersectin 2, humanhuman

TSL 5

Gene ITSN2, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-212ENST00000479575 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
ITSN2-212ENST00000479575 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
ITSN2-212ENST00000479575 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
ITSN2-212ENST00000479575 PHF23Q9BUL5 403 aaPredicted RBP19.71■□□□□ 0.75
ITSN2-212ENST00000479575 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
ITSN2-212ENST00000479575 FOXD1Q16676 465 aa18.8■□□□□ 0.6
ITSN2-212ENST00000479575 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
ITSN2-212ENST00000479575 MSH5O43196 834 aa17.72■□□□□ 0.43
ITSN2-212ENST00000479575 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
ITSN2-212ENST00000479575 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
ITSN2-212ENST00000479575 ADRA2BP18089 450 aa17.02■□□□□ 0.32
ITSN2-212ENST00000479575 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
ITSN2-212ENST00000479575 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
ITSN2-212ENST00000479575 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
ITSN2-212ENST00000479575 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
ITSN2-212ENST00000479575 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
ITSN2-212ENST00000479575 SHROOM4Q9ULL8 1493 aa15.64■□□□□ 0.09
ITSN2-212ENST00000479575 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
ITSN2-212ENST00000479575 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
ITSN2-212ENST00000479575 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
ITSN2-212ENST00000479575 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
ITSN2-212ENST00000479575 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
ITSN2-212ENST00000479575 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
ITSN2-212ENST00000479575 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
ITSN2-212ENST00000479575 ABCC9O60706 1549 aa15.14■□□□□ 0.01
ITSN2-212ENST00000479575 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
ITSN2-212ENST00000479575 SCRIBQ14160 1630 aa15.05■□□□□ -0
ITSN2-212ENST00000479575 NACADO15069 1562 aa14.99□□□□□ -0.01
ITSN2-212ENST00000479575 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
ITSN2-212ENST00000479575 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
ITSN2-212ENST00000479575 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
ITSN2-212ENST00000479575 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
ITSN2-212ENST00000479575 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
ITSN2-212ENST00000479575 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
ITSN2-212ENST00000479575 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
ITSN2-212ENST00000479575 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
ITSN2-212ENST00000479575 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
ITSN2-212ENST00000479575 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
ITSN2-212ENST00000479575 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.08
ITSN2-212ENST00000479575 WIZO95785 1651 aa14.57□□□□□ -0.08
ITSN2-212ENST00000479575 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
ITSN2-212ENST00000479575 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
ITSN2-212ENST00000479575 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
ITSN2-212ENST00000479575 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
ITSN2-212ENST00000479575 BICRAQ9NZM4 1560 aa14.35□□□□□ -0.11
ITSN2-212ENST00000479575 POTEHQ6S545 545 aa14.32□□□□□ -0.12
ITSN2-212ENST00000479575 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
ITSN2-212ENST00000479575 LOC105371045A0A1W2PR82 267 aa14.25□□□□□ -0.13
ITSN2-212ENST00000479575 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
ITSN2-212ENST00000479575 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
ITSN2-212ENST00000479575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.22□□□□□ -0.13
ITSN2-212ENST00000479575 HRCP23327 699 aa14.2□□□□□ -0.14
ITSN2-212ENST00000479575 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
ITSN2-212ENST00000479575 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
ITSN2-212ENST00000479575 ABCC8Q09428 1581 aa14.12□□□□□ -0.15
ITSN2-212ENST00000479575 TRIM26Q12899 539 aaPredicted RBP14.02□□□□□ -0.17
ITSN2-212ENST00000479575 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.17
ITSN2-212ENST00000479575 ATAD2BQ9ULI0 1458 aa13.99□□□□□ -0.17
ITSN2-212ENST00000479575 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
ITSN2-212ENST00000479575 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
ITSN2-212ENST00000479575 DSG3P32926 999 aa13.96□□□□□ -0.17
ITSN2-212ENST00000479575 EEA1Q15075 1411 aa13.96□□□□□ -0.18
ITSN2-212ENST00000479575 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
ITSN2-212ENST00000479575 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
ITSN2-212ENST00000479575 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
ITSN2-212ENST00000479575 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
ITSN2-212ENST00000479575 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
ITSN2-212ENST00000479575 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
ITSN2-212ENST00000479575 KIF21BO75037 1637 aa13.88□□□□□ -0.19
ITSN2-212ENST00000479575 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
ITSN2-212ENST00000479575 CAPN15O75808 1086 aa13.86□□□□□ -0.19
ITSN2-212ENST00000479575 SOGA1O94964 1423 aa13.86□□□□□ -0.19
ITSN2-212ENST00000479575 PRDM2Q13029 1718 aa13.86□□□□□ -0.19
ITSN2-212ENST00000479575 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
ITSN2-212ENST00000479575 GOLGA3Q08378 1498 aa13.82□□□□□ -0.2
ITSN2-212ENST00000479575 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
ITSN2-212ENST00000479575 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
ITSN2-212ENST00000479575 TNIKQ9UKE5 1360 aa13.81□□□□□ -0.2
ITSN2-212ENST00000479575 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
ITSN2-212ENST00000479575 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
ITSN2-212ENST00000479575 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
ITSN2-212ENST00000479575 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
ITSN2-212ENST00000479575 CEP164Q9UPV0 1460 aa13.75□□□□□ -0.21
ITSN2-212ENST00000479575 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
ITSN2-212ENST00000479575 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
ITSN2-212ENST00000479575 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
ITSN2-212ENST00000479575 CUX1P39880 1505 aa13.64□□□□□ -0.23
ITSN2-212ENST00000479575 CFTRP13569 1480 aa13.61□□□□□ -0.23
ITSN2-212ENST00000479575 RAPGEF2Q9Y4G8 1499 aa13.59□□□□□ -0.23
ITSN2-212ENST00000479575 CLIP1P30622 1438 aa13.57□□□□□ -0.24
ITSN2-212ENST00000479575 UBTFP17480 764 aaKnown RBP13.56□□□□□ -0.24
ITSN2-212ENST00000479575 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
ITSN2-212ENST00000479575 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
ITSN2-212ENST00000479575 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
ITSN2-212ENST00000479575 ABCB7O75027 752 aa13.52□□□□□ -0.25
ITSN2-212ENST00000479575 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
ITSN2-212ENST00000479575 KIF27Q86VH2 1401 aa13.47□□□□□ -0.25
ITSN2-212ENST00000479575 ARAP1Q96P48 1450 aa13.46□□□□□ -0.25
ITSN2-212ENST00000479575 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
ITSN2-212ENST00000479575 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms