RNA–Protein interactions for RNA: ENST00000478490.5

MITF-215, Transcript of melanogenesis associated transcription factor, humanhuman

TSL 5

Gene MITF, Length 1,642 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-215ENST00000478490 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
MITF-215ENST00000478490 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
MITF-215ENST00000478490 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
MITF-215ENST00000478490 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
MITF-215ENST00000478490 NISCHQ9Y2I1 1504 aa15.19■□□□□ 0.02
MITF-215ENST00000478490 FOXD1Q16676 465 aa14.26□□□□□ -0.13
MITF-215ENST00000478490 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
MITF-215ENST00000478490 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
MITF-215ENST00000478490 PPP6R1Q9UPN7 881 aa13.54□□□□□ -0.24
MITF-215ENST00000478490 ABCC9O60706 1549 aa13.54□□□□□ -0.24
MITF-215ENST00000478490 ADRA2BP18089 450 aa13.51□□□□□ -0.25
MITF-215ENST00000478490 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
MITF-215ENST00000478490 MSH5O43196 834 aa13.2□□□□□ -0.3
MITF-215ENST00000478490 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
MITF-215ENST00000478490 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
MITF-215ENST00000478490 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
MITF-215ENST00000478490 NACADO15069 1562 aa12.79□□□□□ -0.36
MITF-215ENST00000478490 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
MITF-215ENST00000478490 PABPN1Q86U42 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
MITF-215ENST00000478490 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
MITF-215ENST00000478490 ZCCHC6Q5VYS8 1495 aaKnown RBP12.59□□□□□ -0.39
MITF-215ENST00000478490 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
MITF-215ENST00000478490 BICRAQ9NZM4 1560 aa12.54□□□□□ -0.4
MITF-215ENST00000478490 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
MITF-215ENST00000478490 DCAF1Q9Y4B6 1507 aa12.48□□□□□ -0.41
MITF-215ENST00000478490 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
MITF-215ENST00000478490 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
MITF-215ENST00000478490 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
MITF-215ENST00000478490 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
MITF-215ENST00000478490 SHROOM4Q9ULL8 1493 aa12.23□□□□□ -0.45
MITF-215ENST00000478490 EIF4G1Q04637 1599 aaKnown RBP12.2□□□□□ -0.46
MITF-215ENST00000478490 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
MITF-215ENST00000478490 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
MITF-215ENST00000478490 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
MITF-215ENST00000478490 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
MITF-215ENST00000478490 ATAD2BQ9ULI0 1458 aa11.8□□□□□ -0.52
MITF-215ENST00000478490 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
MITF-215ENST00000478490 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
MITF-215ENST00000478490 NCAPD3P42695 1498 aa11.77□□□□□ -0.52
MITF-215ENST00000478490 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
MITF-215ENST00000478490 SMARCA2P51531 1590 aa11.76□□□□□ -0.53
MITF-215ENST00000478490 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
MITF-215ENST00000478490 MROH2BQ7Z745 1585 aa11.74□□□□□ -0.53
MITF-215ENST00000478490 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
MITF-215ENST00000478490 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
MITF-215ENST00000478490 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
MITF-215ENST00000478490 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
MITF-215ENST00000478490 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
MITF-215ENST00000478490 NESP48681 1621 aa11.67□□□□□ -0.54
MITF-215ENST00000478490 WIZO95785 1651 aa11.67□□□□□ -0.54
MITF-215ENST00000478490 KCNA4P22459 653 aa11.67□□□□□ -0.54
MITF-215ENST00000478490 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
MITF-215ENST00000478490 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
MITF-215ENST00000478490 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
MITF-215ENST00000478490 CUX2O14529 1486 aa11.54□□□□□ -0.56
MITF-215ENST00000478490 THOC2Q8NI27 1593 aaKnown RBP11.52□□□□□ -0.56
MITF-215ENST00000478490 RSF1Q96T23 1441 aaPredicted RBP11.49□□□□□ -0.57
MITF-215ENST00000478490 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
MITF-215ENST00000478490 TOP2AP11388 1531 aaKnown RBP11.44□□□□□ -0.58
MITF-215ENST00000478490 CADPSQ9ULU8 1353 aa11.44□□□□□ -0.58
MITF-215ENST00000478490 DNAJC5Q9H3Z4 198 aa11.42□□□□□ -0.58
MITF-215ENST00000478490 PRDM2Q13029 1718 aa11.38□□□□□ -0.59
MITF-215ENST00000478490 MRC2Q9UBG0 1479 aa11.37□□□□□ -0.59
MITF-215ENST00000478490 FANCD2Q9BXW9 1451 aa11.35□□□□□ -0.59
MITF-215ENST00000478490 CEP164Q9UPV0 1460 aa11.35□□□□□ -0.59
MITF-215ENST00000478490 WDR62O43379 1518 aa11.34□□□□□ -0.59
MITF-215ENST00000478490 CFTRP13569 1480 aa11.33□□□□□ -0.6
MITF-215ENST00000478490 CCDC88BA6NC98 1476 aa11.33□□□□□ -0.6
MITF-215ENST00000478490 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
MITF-215ENST00000478490 URB2Q14146 1524 aaKnown RBP11.27□□□□□ -0.61
MITF-215ENST00000478490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.27□□□□□ -0.61
MITF-215ENST00000478490 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
MITF-215ENST00000478490 TOPBP1Q92547 1522 aa11.16□□□□□ -0.62
MITF-215ENST00000478490 SUPT5HO00267 1087 aaKnown RBP11.15□□□□□ -0.62
MITF-215ENST00000478490 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
MITF-215ENST00000478490 C1QBPQ07021 282 aaKnown RBP11.13□□□□□ -0.63
MITF-215ENST00000478490 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
MITF-215ENST00000478490 SLC4A2P04920 1241 aa11.1□□□□□ -0.63
MITF-215ENST00000478490 EIF4G3O43432 1585 aaKnown RBP11.09□□□□□ -0.63
MITF-215ENST00000478490 IFT140Q96RY7 1462 aa11.09□□□□□ -0.63
MITF-215ENST00000478490 TARBP1Q13395 1621 aaKnown RBP11.08□□□□□ -0.64
MITF-215ENST00000478490 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
MITF-215ENST00000478490 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
MITF-215ENST00000478490 CHD1O14646 1710 aa11.06□□□□□ -0.64
MITF-215ENST00000478490 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
MITF-215ENST00000478490 POLA1P09884 1462 aaPredicted RBP11.04□□□□□ -0.64
MITF-215ENST00000478490 RAD54L2Q9Y4B4 1467 aa11.04□□□□□ -0.64
MITF-215ENST00000478490 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
MITF-215ENST00000478490 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.64
MITF-215ENST00000478490 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.64
MITF-215ENST00000478490 CUX1P39880 1505 aa11.02□□□□□ -0.65
MITF-215ENST00000478490 FGD5Q6ZNL6 1462 aa11.01□□□□□ -0.65
MITF-215ENST00000478490 SOGA1O94964 1423 aa10.99□□□□□ -0.65
MITF-215ENST00000478490 RIMBP3CA6NJZ7 1639 aa10.98□□□□□ -0.65
MITF-215ENST00000478490 RIMBP3BA6NNM3 1639 aa10.98□□□□□ -0.65
MITF-215ENST00000478490 RIMBP3Q9UFD9 1639 aa10.98□□□□□ -0.65
MITF-215ENST00000478490 TDRD9Q8NDG6 1382 aaKnown RBP10.97□□□□□ -0.65
MITF-215ENST00000478490 WDR97A6NE52 1622 aa10.97□□□□□ -0.65
MITF-215ENST00000478490 FBLN2P98095 1184 aa10.96□□□□□ -0.65
MITF-215ENST00000478490 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms