RNA–Protein interactions for RNA: ENST00000476798.1

SCML4-210, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 2

Gene SCML4, Length 2,679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-210ENST00000476798 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
SCML4-210ENST00000476798 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
SCML4-210ENST00000476798 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
SCML4-210ENST00000476798 DCAF1Q9Y4B6 1507 aa20.06■□□□□ 0.8
SCML4-210ENST00000476798 MYO15BQ96JP2 1530 aa19.89■□□□□ 0.77
SCML4-210ENST00000476798 ABCC9O60706 1549 aa19.87■□□□□ 0.77
SCML4-210ENST00000476798 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
SCML4-210ENST00000476798 NACADO15069 1562 aa19.71■□□□□ 0.75
SCML4-210ENST00000476798 HRCP23327 699 aa19.64■□□□□ 0.73
SCML4-210ENST00000476798 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
SCML4-210ENST00000476798 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
SCML4-210ENST00000476798 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
SCML4-210ENST00000476798 SCRIBQ14160 1630 aa19.26■□□□□ 0.67
SCML4-210ENST00000476798 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
SCML4-210ENST00000476798 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
SCML4-210ENST00000476798 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
SCML4-210ENST00000476798 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
SCML4-210ENST00000476798 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
SCML4-210ENST00000476798 MYT1Q01538 1121 aa18.78■□□□□ 0.6
SCML4-210ENST00000476798 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
SCML4-210ENST00000476798 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCML4-210ENST00000476798 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
SCML4-210ENST00000476798 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
SCML4-210ENST00000476798 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
SCML4-210ENST00000476798 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
SCML4-210ENST00000476798 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
SCML4-210ENST00000476798 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
SCML4-210ENST00000476798 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
SCML4-210ENST00000476798 WIZO95785 1651 aa18.38■□□□□ 0.53
SCML4-210ENST00000476798 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
SCML4-210ENST00000476798 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
SCML4-210ENST00000476798 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
SCML4-210ENST00000476798 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
SCML4-210ENST00000476798 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
SCML4-210ENST00000476798 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
SCML4-210ENST00000476798 ACIN1Q9UKV3 1341 aaKnown RBP18.2■□□□□ 0.5
SCML4-210ENST00000476798 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
SCML4-210ENST00000476798 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
SCML4-210ENST00000476798 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
SCML4-210ENST00000476798 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.5
SCML4-210ENST00000476798 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
SCML4-210ENST00000476798 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
SCML4-210ENST00000476798 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
SCML4-210ENST00000476798 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
SCML4-210ENST00000476798 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
SCML4-210ENST00000476798 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
SCML4-210ENST00000476798 CFTRP13569 1480 aa17.72■□□□□ 0.43
SCML4-210ENST00000476798 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
SCML4-210ENST00000476798 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
SCML4-210ENST00000476798 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
SCML4-210ENST00000476798 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
SCML4-210ENST00000476798 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
SCML4-210ENST00000476798 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
SCML4-210ENST00000476798 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
SCML4-210ENST00000476798 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
SCML4-210ENST00000476798 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
SCML4-210ENST00000476798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.52■□□□□ 0.4
SCML4-210ENST00000476798 CCER1Q8TC90 406 aaPredicted RBP17.49■□□□□ 0.39
SCML4-210ENST00000476798 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
SCML4-210ENST00000476798 FAM9AQ8IZU1 332 aaPredicted RBP17.44■□□□□ 0.38
SCML4-210ENST00000476798 BIVM-ERCC5R4GMW8 1640 aa17.44■□□□□ 0.38
SCML4-210ENST00000476798 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
SCML4-210ENST00000476798 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
SCML4-210ENST00000476798 YTHDC1Q96MU7 727 aaKnown RBP17.43■□□□□ 0.38
SCML4-210ENST00000476798 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
SCML4-210ENST00000476798 NESP48681 1621 aa17.4■□□□□ 0.38
SCML4-210ENST00000476798 EEA1Q15075 1411 aa17.37■□□□□ 0.37
SCML4-210ENST00000476798 CUX1P39880 1505 aa17.37■□□□□ 0.37
SCML4-210ENST00000476798 CEP164Q9UPV0 1460 aa17.35■□□□□ 0.37
SCML4-210ENST00000476798 ANP32EQ9BTT0 268 aa17.35■□□□□ 0.37
SCML4-210ENST00000476798 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
SCML4-210ENST00000476798 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
SCML4-210ENST00000476798 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
SCML4-210ENST00000476798 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
SCML4-210ENST00000476798 SOGA1O94964 1423 aa17.22■□□□□ 0.35
SCML4-210ENST00000476798 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
SCML4-210ENST00000476798 MIER1Q8N108 512 aa17.21■□□□□ 0.35
SCML4-210ENST00000476798 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
SCML4-210ENST00000476798 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
SCML4-210ENST00000476798 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
SCML4-210ENST00000476798 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
SCML4-210ENST00000476798 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
SCML4-210ENST00000476798 TSHZ2Q9NRE2 1034 aa17.15■□□□□ 0.34
SCML4-210ENST00000476798 POLA1P09884 1462 aaPredicted RBP17.14■□□□□ 0.33
SCML4-210ENST00000476798 RUSC2Q8N2Y8 1516 aa17.13■□□□□ 0.33
SCML4-210ENST00000476798 SUPT16HQ9Y5B9 1047 aaKnown RBP17.13■□□□□ 0.33
SCML4-210ENST00000476798 WDR62O43379 1518 aa17.11■□□□□ 0.33
SCML4-210ENST00000476798 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
SCML4-210ENST00000476798 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
SCML4-210ENST00000476798 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
SCML4-210ENST00000476798 KIF21BO75037 1637 aa17.08■□□□□ 0.33
SCML4-210ENST00000476798 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
SCML4-210ENST00000476798 CUX2O14529 1486 aa17.06■□□□□ 0.32
SCML4-210ENST00000476798 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
SCML4-210ENST00000476798 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
SCML4-210ENST00000476798 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
SCML4-210ENST00000476798 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.31
SCML4-210ENST00000476798 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
SCML4-210ENST00000476798 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
SCML4-210ENST00000476798 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms