RNA–Protein interactions for RNA: ENST00000474792.1

NLRP3-207, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 2

Gene NLRP3, Length 2,524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-207ENST00000474792 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
NLRP3-207ENST00000474792 SHROOM4Q9ULL8 1493 aa21.51■■□□□ 1.03
NLRP3-207ENST00000474792 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
NLRP3-207ENST00000474792 ZCCHC6Q5VYS8 1495 aaKnown RBP21.24■□□□□ 0.99
NLRP3-207ENST00000474792 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
NLRP3-207ENST00000474792 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
NLRP3-207ENST00000474792 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
NLRP3-207ENST00000474792 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
NLRP3-207ENST00000474792 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
NLRP3-207ENST00000474792 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
NLRP3-207ENST00000474792 ABCC9O60706 1549 aa20.05■□□□□ 0.8
NLRP3-207ENST00000474792 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
NLRP3-207ENST00000474792 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
NLRP3-207ENST00000474792 NACADO15069 1562 aa19.77■□□□□ 0.76
NLRP3-207ENST00000474792 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
NLRP3-207ENST00000474792 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
NLRP3-207ENST00000474792 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
NLRP3-207ENST00000474792 HRCP23327 699 aa19.63■□□□□ 0.73
NLRP3-207ENST00000474792 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
NLRP3-207ENST00000474792 MROH2BQ7Z745 1585 aa19.56■□□□□ 0.72
NLRP3-207ENST00000474792 WIZO95785 1651 aa19.48■□□□□ 0.71
NLRP3-207ENST00000474792 FAM9AQ8IZU1 332 aaPredicted RBP19.47■□□□□ 0.71
NLRP3-207ENST00000474792 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
NLRP3-207ENST00000474792 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
NLRP3-207ENST00000474792 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
NLRP3-207ENST00000474792 TRIM26Q12899 539 aaPredicted RBP19.31■□□□□ 0.68
NLRP3-207ENST00000474792 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
NLRP3-207ENST00000474792 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
NLRP3-207ENST00000474792 EIF4G1Q04637 1599 aaKnown RBP19.13■□□□□ 0.65
NLRP3-207ENST00000474792 TOP2AP11388 1531 aaKnown RBP19.13■□□□□ 0.65
NLRP3-207ENST00000474792 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
NLRP3-207ENST00000474792 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
NLRP3-207ENST00000474792 ABCC8Q09428 1581 aa19.05■□□□□ 0.64
NLRP3-207ENST00000474792 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
NLRP3-207ENST00000474792 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
NLRP3-207ENST00000474792 SOGA1O94964 1423 aa18.83■□□□□ 0.6
NLRP3-207ENST00000474792 ZEB1P37275 1124 aaPredicted RBP18.82■□□□□ 0.6
NLRP3-207ENST00000474792 PEG3Q9GZU2 1588 aa18.75■□□□□ 0.59
NLRP3-207ENST00000474792 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
NLRP3-207ENST00000474792 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
NLRP3-207ENST00000474792 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
NLRP3-207ENST00000474792 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
NLRP3-207ENST00000474792 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
NLRP3-207ENST00000474792 UBTFP17480 764 aaKnown RBP18.67■□□□□ 0.58
NLRP3-207ENST00000474792 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
NLRP3-207ENST00000474792 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
NLRP3-207ENST00000474792 EEA1Q15075 1411 aa18.65■□□□□ 0.58
NLRP3-207ENST00000474792 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
NLRP3-207ENST00000474792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
NLRP3-207ENST00000474792 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
NLRP3-207ENST00000474792 GOLGA3Q08378 1498 aa18.57■□□□□ 0.56
NLRP3-207ENST00000474792 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
NLRP3-207ENST00000474792 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
NLRP3-207ENST00000474792 KIF21BO75037 1637 aa18.43■□□□□ 0.54
NLRP3-207ENST00000474792 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
NLRP3-207ENST00000474792 CLIP1P30622 1438 aa18.37■□□□□ 0.53
NLRP3-207ENST00000474792 RAPGEF2Q9Y4G8 1499 aa18.37■□□□□ 0.53
NLRP3-207ENST00000474792 TOP2BQ02880 1626 aa18.36■□□□□ 0.53
NLRP3-207ENST00000474792 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
NLRP3-207ENST00000474792 HMGXB3Q12766 1538 aa18.29■□□□□ 0.52
NLRP3-207ENST00000474792 BIVM-ERCC5R4GMW8 1640 aa18.29■□□□□ 0.52
NLRP3-207ENST00000474792 NCAPD3P42695 1498 aa18.28■□□□□ 0.52
NLRP3-207ENST00000474792 VPS8Q8N3P4 1428 aa18.27■□□□□ 0.51
NLRP3-207ENST00000474792 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
NLRP3-207ENST00000474792 APLP2Q06481 763 aa18.23■□□□□ 0.51
NLRP3-207ENST00000474792 CUX1P39880 1505 aa18.21■□□□□ 0.51
NLRP3-207ENST00000474792 CFTRP13569 1480 aa18.14■□□□□ 0.5
NLRP3-207ENST00000474792 PRXQ9BXM0 1461 aa18.14■□□□□ 0.49
NLRP3-207ENST00000474792 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
NLRP3-207ENST00000474792 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
NLRP3-207ENST00000474792 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
NLRP3-207ENST00000474792 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.48
NLRP3-207ENST00000474792 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
NLRP3-207ENST00000474792 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
NLRP3-207ENST00000474792 KANK4Q5T7N3 995 aaPredicted RBP17.99■□□□□ 0.47
NLRP3-207ENST00000474792 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
NLRP3-207ENST00000474792 CUX2O14529 1486 aa17.97■□□□□ 0.47
NLRP3-207ENST00000474792 MYT1Q01538 1121 aa17.96■□□□□ 0.47
NLRP3-207ENST00000474792 CADPSQ9ULU8 1353 aa17.96■□□□□ 0.47
NLRP3-207ENST00000474792 ARHGAP35Q9NRY4 1499 aa17.93■□□□□ 0.46
NLRP3-207ENST00000474792 NEUROD1Q13562 356 aa17.93■□□□□ 0.46
NLRP3-207ENST00000474792 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
NLRP3-207ENST00000474792 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
NLRP3-207ENST00000474792 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
NLRP3-207ENST00000474792 IGF1RP08069 1367 aa17.89■□□□□ 0.45
NLRP3-207ENST00000474792 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
NLRP3-207ENST00000474792 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.45
NLRP3-207ENST00000474792 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
NLRP3-207ENST00000474792 ITGAEP38570 1179 aa17.81■□□□□ 0.44
NLRP3-207ENST00000474792 DHX57Q6P158 1386 aaKnown RBP17.81■□□□□ 0.44
NLRP3-207ENST00000474792 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
NLRP3-207ENST00000474792 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
NLRP3-207ENST00000474792 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.44
NLRP3-207ENST00000474792 NESP48681 1621 aa17.75■□□□□ 0.43
NLRP3-207ENST00000474792 P3H3Q8IVL6 736 aa17.75■□□□□ 0.43
NLRP3-207ENST00000474792 MIER1Q8N108 512 aa17.75■□□□□ 0.43
NLRP3-207ENST00000474792 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
NLRP3-207ENST00000474792 GTF3C3Q9Y5Q9 886 aa17.74■□□□□ 0.43
NLRP3-207ENST00000474792 TIAM1Q13009 1591 aa17.73■□□□□ 0.43
NLRP3-207ENST00000474792 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms