RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
SAMM50-203ENST00000474323 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
SAMM50-203ENST00000474323 ZCCHC6Q5VYS8 1495 aaKnown RBP25.14■■□□□ 1.61
SAMM50-203ENST00000474323 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.57
SAMM50-203ENST00000474323 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
SAMM50-203ENST00000474323 DCAF1Q9Y4B6 1507 aa24.62■■□□□ 1.53
SAMM50-203ENST00000474323 ABCC9O60706 1549 aa24.59■■□□□ 1.53
SAMM50-203ENST00000474323 HRCP23327 699 aa24.5■■□□□ 1.51
SAMM50-203ENST00000474323 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
SAMM50-203ENST00000474323 NACADO15069 1562 aa24.13■■□□□ 1.45
SAMM50-203ENST00000474323 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
SAMM50-203ENST00000474323 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
SAMM50-203ENST00000474323 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
SAMM50-203ENST00000474323 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
SAMM50-203ENST00000474323 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
SAMM50-203ENST00000474323 PPARGC1BQ86YN6 1023 aaKnown RBP23.77■■□□□ 1.4
SAMM50-203ENST00000474323 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
SAMM50-203ENST00000474323 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
SAMM50-203ENST00000474323 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
SAMM50-203ENST00000474323 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
SAMM50-203ENST00000474323 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
SAMM50-203ENST00000474323 BICRAQ9NZM4 1560 aa23.24■■□□□ 1.31
SAMM50-203ENST00000474323 TRIM26Q12899 539 aaPredicted RBP23.24■■□□□ 1.31
SAMM50-203ENST00000474323 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
SAMM50-203ENST00000474323 MROH2BQ7Z745 1585 aa23.17■■□□□ 1.3
SAMM50-203ENST00000474323 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
SAMM50-203ENST00000474323 SLC24A1O60721 1099 aa23.08■■□□□ 1.29
SAMM50-203ENST00000474323 BAZ1AQ9NRL2 1556 aaPredicted RBP23.06■■□□□ 1.28
SAMM50-203ENST00000474323 LOC105371045A0A1W2PR82 267 aa23.03■■□□□ 1.28
SAMM50-203ENST00000474323 WIZO95785 1651 aa23.01■■□□□ 1.27
SAMM50-203ENST00000474323 MYT1Q01538 1121 aa23.01■■□□□ 1.27
SAMM50-203ENST00000474323 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
SAMM50-203ENST00000474323 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
SAMM50-203ENST00000474323 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
SAMM50-203ENST00000474323 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
SAMM50-203ENST00000474323 ATAD2BQ9ULI0 1458 aa22.56■■□□□ 1.2
SAMM50-203ENST00000474323 EIF4G1Q04637 1599 aaKnown RBP22.54■■□□□ 1.2
SAMM50-203ENST00000474323 SMARCA2P51531 1590 aa22.52■■□□□ 1.19
SAMM50-203ENST00000474323 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
SAMM50-203ENST00000474323 NEUROD1Q13562 356 aa22.46■■□□□ 1.19
SAMM50-203ENST00000474323 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
SAMM50-203ENST00000474323 CENPBP07199 599 aaPredicted RBP22.38■■□□□ 1.17
SAMM50-203ENST00000474323 GTF3C3Q9Y5Q9 886 aa22.35■■□□□ 1.17
SAMM50-203ENST00000474323 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
SAMM50-203ENST00000474323 NCAPD3P42695 1498 aa22.29■■□□□ 1.16
SAMM50-203ENST00000474323 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
SAMM50-203ENST00000474323 CC2D2AQ9P2K1 1620 aa22.19■■□□□ 1.14
SAMM50-203ENST00000474323 DIEXFQ68CQ4 756 aaKnown RBP22.19■■□□□ 1.14
SAMM50-203ENST00000474323 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
SAMM50-203ENST00000474323 CCER1Q8TC90 406 aaPredicted RBP22.11■■□□□ 1.13
SAMM50-203ENST00000474323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
SAMM50-203ENST00000474323 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
SAMM50-203ENST00000474323 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
SAMM50-203ENST00000474323 CFTRP13569 1480 aa21.87■■□□□ 1.09
SAMM50-203ENST00000474323 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
SAMM50-203ENST00000474323 EHMT2Q96KQ7 1210 aa21.82■■□□□ 1.08
SAMM50-203ENST00000474323 ZNF316A6NFI3 1004 aaPredicted RBP21.8■■□□□ 1.08
SAMM50-203ENST00000474323 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
SAMM50-203ENST00000474323 SOGA1O94964 1423 aa21.76■■□□□ 1.07
SAMM50-203ENST00000474323 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
SAMM50-203ENST00000474323 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
SAMM50-203ENST00000474323 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
SAMM50-203ENST00000474323 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
SAMM50-203ENST00000474323 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
SAMM50-203ENST00000474323 YTHDC1Q96MU7 727 aaKnown RBP21.65■■□□□ 1.06
SAMM50-203ENST00000474323 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
SAMM50-203ENST00000474323 NESP48681 1621 aa21.64■■□□□ 1.05
SAMM50-203ENST00000474323 CUX1P39880 1505 aa21.63■■□□□ 1.05
SAMM50-203ENST00000474323 EEA1Q15075 1411 aa21.59■■□□□ 1.05
SAMM50-203ENST00000474323 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.04
SAMM50-203ENST00000474323 MIER1Q8N108 512 aa21.57■■□□□ 1.04
SAMM50-203ENST00000474323 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
SAMM50-203ENST00000474323 PRKCSHP14314 528 aaPredicted RBP21.54■■□□□ 1.04
SAMM50-203ENST00000474323 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
SAMM50-203ENST00000474323 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
SAMM50-203ENST00000474323 DAXXQ9UER7 740 aaPredicted RBP21.4■■□□□ 1.02
SAMM50-203ENST00000474323 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
SAMM50-203ENST00000474323 CEP162Q5TB80 1403 aa21.39■■□□□ 1.02
SAMM50-203ENST00000474323 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
SAMM50-203ENST00000474323 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
SAMM50-203ENST00000474323 GOLGA3Q08378 1498 aa21.38■■□□□ 1.01
SAMM50-203ENST00000474323 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
SAMM50-203ENST00000474323 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
SAMM50-203ENST00000474323 ANP32EQ9BTT0 268 aa21.34■■□□□ 1.01
SAMM50-203ENST00000474323 KIF21BO75037 1637 aa21.34■■□□□ 1.01
SAMM50-203ENST00000474323 KIF27Q86VH2 1401 aa21.34■■□□□ 1.01
SAMM50-203ENST00000474323 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
SAMM50-203ENST00000474323 TOPBP1Q92547 1522 aa21.33■■□□□ 1.01
SAMM50-203ENST00000474323 TNIKQ9UKE5 1360 aa21.33■■□□□ 1.01
SAMM50-203ENST00000474323 SUPT16HQ9Y5B9 1047 aaKnown RBP21.32■■□□□ 1
SAMM50-203ENST00000474323 CUX2O14529 1486 aa21.3■■□□□ 1
SAMM50-203ENST00000474323 RAPGEF2Q9Y4G8 1499 aa21.29■■□□□ 1
SAMM50-203ENST00000474323 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
SAMM50-203ENST00000474323 APLP2Q06481 763 aa21.29■■□□□ 1
SAMM50-203ENST00000474323 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
SAMM50-203ENST00000474323 BCL11AQ9H165 835 aa21.24■□□□□ 0.99
SAMM50-203ENST00000474323 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
SAMM50-203ENST00000474323 TSHZ2Q9NRE2 1034 aa21.23■□□□□ 0.99
SAMM50-203ENST00000474323 PRXQ9BXM0 1461 aa21.21■□□□□ 0.99
SAMM50-203ENST00000474323 ERICH3Q5RHP9 1530 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms