RNA–Protein interactions for RNA: ENST00000473874.1

ABCF2-205, Transcript of ATP binding cassette subfamily F member 2, humanhuman

TSL 3

Gene ABCF2, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-205ENST00000473874 AEBP2Q6ZN18 517 aaPredicted RBP21.79■■□□□ 1.08
ABCF2-205ENST00000473874 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
ABCF2-205ENST00000473874 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
ABCF2-205ENST00000473874 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
ABCF2-205ENST00000473874 FOXD1Q16676 465 aa17.2■□□□□ 0.34
ABCF2-205ENST00000473874 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
ABCF2-205ENST00000473874 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
ABCF2-205ENST00000473874 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
ABCF2-205ENST00000473874 ADRA2BP18089 450 aa16.28■□□□□ 0.2
ABCF2-205ENST00000473874 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
ABCF2-205ENST00000473874 MSH5O43196 834 aa15.82■□□□□ 0.12
ABCF2-205ENST00000473874 ABCC9O60706 1549 aa15.67■□□□□ 0.1
ABCF2-205ENST00000473874 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
ABCF2-205ENST00000473874 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
ABCF2-205ENST00000473874 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
ABCF2-205ENST00000473874 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
ABCF2-205ENST00000473874 RB1CC1Q8TDY2 1594 aa14.79□□□□□ -0.04
ABCF2-205ENST00000473874 PPP4R3CPQ6ZMV5 832 aa14.71□□□□□ -0.05
ABCF2-205ENST00000473874 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
ABCF2-205ENST00000473874 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
ABCF2-205ENST00000473874 NACADO15069 1562 aa14.64□□□□□ -0.07
ABCF2-205ENST00000473874 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
ABCF2-205ENST00000473874 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
ABCF2-205ENST00000473874 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
ABCF2-205ENST00000473874 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
ABCF2-205ENST00000473874 MYO15BQ96JP2 1530 aa14.35□□□□□ -0.11
ABCF2-205ENST00000473874 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
ABCF2-205ENST00000473874 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.13
ABCF2-205ENST00000473874 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
ABCF2-205ENST00000473874 CC2D2AQ9P2K1 1620 aa14.13□□□□□ -0.15
ABCF2-205ENST00000473874 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
ABCF2-205ENST00000473874 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
ABCF2-205ENST00000473874 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
ABCF2-205ENST00000473874 CECR2Q9BXF3 1484 aa14.11□□□□□ -0.15
ABCF2-205ENST00000473874 NCBP3Q53F19 620 aaKnown RBP14.08□□□□□ -0.16
ABCF2-205ENST00000473874 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
ABCF2-205ENST00000473874 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
ABCF2-205ENST00000473874 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
ABCF2-205ENST00000473874 KCNA4P22459 653 aa14.04□□□□□ -0.16
ABCF2-205ENST00000473874 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
ABCF2-205ENST00000473874 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
ABCF2-205ENST00000473874 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
ABCF2-205ENST00000473874 NCAPD3P42695 1498 aa13.53□□□□□ -0.24
ABCF2-205ENST00000473874 ERCC6Q03468 1493 aa13.51□□□□□ -0.25
ABCF2-205ENST00000473874 CUX2O14529 1486 aa13.5□□□□□ -0.25
ABCF2-205ENST00000473874 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
ABCF2-205ENST00000473874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
ABCF2-205ENST00000473874 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
ABCF2-205ENST00000473874 NESP48681 1621 aa13.42□□□□□ -0.26
ABCF2-205ENST00000473874 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
ABCF2-205ENST00000473874 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
ABCF2-205ENST00000473874 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
ABCF2-205ENST00000473874 HMGXB3Q12766 1538 aa13.39□□□□□ -0.27
ABCF2-205ENST00000473874 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
ABCF2-205ENST00000473874 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
ABCF2-205ENST00000473874 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
ABCF2-205ENST00000473874 BAZ1AQ9NRL2 1556 aaPredicted RBP13.31□□□□□ -0.28
ABCF2-205ENST00000473874 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
ABCF2-205ENST00000473874 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
ABCF2-205ENST00000473874 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
ABCF2-205ENST00000473874 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
ABCF2-205ENST00000473874 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
ABCF2-205ENST00000473874 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
ABCF2-205ENST00000473874 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
ABCF2-205ENST00000473874 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
ABCF2-205ENST00000473874 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
ABCF2-205ENST00000473874 WIZO95785 1651 aa13.11□□□□□ -0.31
ABCF2-205ENST00000473874 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
ABCF2-205ENST00000473874 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
ABCF2-205ENST00000473874 WDR62O43379 1518 aa13.03□□□□□ -0.32
ABCF2-205ENST00000473874 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
ABCF2-205ENST00000473874 ZBTB22O15209 634 aa12.98□□□□□ -0.33
ABCF2-205ENST00000473874 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
ABCF2-205ENST00000473874 CAPN15O75808 1086 aa12.93□□□□□ -0.34
ABCF2-205ENST00000473874 CFTRP13569 1480 aa12.92□□□□□ -0.34
ABCF2-205ENST00000473874 OSCARQ8IYS5 282 aa12.92□□□□□ -0.34
ABCF2-205ENST00000473874 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
ABCF2-205ENST00000473874 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
ABCF2-205ENST00000473874 URB2Q14146 1524 aaKnown RBP12.9□□□□□ -0.34
ABCF2-205ENST00000473874 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
ABCF2-205ENST00000473874 DSG3P32926 999 aa12.87□□□□□ -0.35
ABCF2-205ENST00000473874 TOP2AP11388 1531 aaKnown RBP12.87□□□□□ -0.35
ABCF2-205ENST00000473874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
ABCF2-205ENST00000473874 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
ABCF2-205ENST00000473874 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
ABCF2-205ENST00000473874 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
ABCF2-205ENST00000473874 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
ABCF2-205ENST00000473874 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
ABCF2-205ENST00000473874 RIMBP3CA6NJZ7 1639 aa12.77□□□□□ -0.36
ABCF2-205ENST00000473874 RIMBP3BA6NNM3 1639 aa12.77□□□□□ -0.36
ABCF2-205ENST00000473874 RIMBP3Q9UFD9 1639 aa12.77□□□□□ -0.36
ABCF2-205ENST00000473874 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
ABCF2-205ENST00000473874 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
ABCF2-205ENST00000473874 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
ABCF2-205ENST00000473874 ABCB7O75027 752 aa12.72□□□□□ -0.37
ABCF2-205ENST00000473874 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
ABCF2-205ENST00000473874 APLP2Q06481 763 aa12.7□□□□□ -0.38
ABCF2-205ENST00000473874 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
ABCF2-205ENST00000473874 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
ABCF2-205ENST00000473874 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms