RNA–Protein interactions for RNA: ENST00000472304.1

TLR4-203, Transcript of toll like receptor 4, humanhuman

TSL 1 (best)

Gene TLR4, Length 2,741 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4-203ENST00000472304 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
TLR4-203ENST00000472304 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
TLR4-203ENST00000472304 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
TLR4-203ENST00000472304 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
TLR4-203ENST00000472304 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.29
TLR4-203ENST00000472304 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
TLR4-203ENST00000472304 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
TLR4-203ENST00000472304 ABCC9O60706 1549 aa12.94□□□□□ -0.34
TLR4-203ENST00000472304 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
TLR4-203ENST00000472304 HRCP23327 699 aa12.8□□□□□ -0.36
TLR4-203ENST00000472304 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
TLR4-203ENST00000472304 MYT1Q01538 1121 aa12.74□□□□□ -0.37
TLR4-203ENST00000472304 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
TLR4-203ENST00000472304 NACADO15069 1562 aa12.7□□□□□ -0.38
TLR4-203ENST00000472304 PPARGC1BQ86YN6 1023 aaKnown RBP12.61□□□□□ -0.39
TLR4-203ENST00000472304 RB1CC1Q8TDY2 1594 aa12.58□□□□□ -0.4
TLR4-203ENST00000472304 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
TLR4-203ENST00000472304 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
TLR4-203ENST00000472304 CECR2Q9BXF3 1484 aa12.38□□□□□ -0.43
TLR4-203ENST00000472304 CHIC1Q5VXU3 224 aa12.37□□□□□ -0.43
TLR4-203ENST00000472304 UNC13AQ9UPW8 1703 aa12.36□□□□□ -0.43
TLR4-203ENST00000472304 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
TLR4-203ENST00000472304 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
TLR4-203ENST00000472304 PCGF6Q9BYE7 350 aa12.29□□□□□ -0.44
TLR4-203ENST00000472304 WIZO95785 1651 aa12.22□□□□□ -0.45
TLR4-203ENST00000472304 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.45
TLR4-203ENST00000472304 BAZ1AQ9NRL2 1556 aaPredicted RBP12.2□□□□□ -0.46
TLR4-203ENST00000472304 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
TLR4-203ENST00000472304 TTBK1Q5TCY1 1321 aaPredicted RBP12.12□□□□□ -0.47
TLR4-203ENST00000472304 LOC105371045A0A1W2PR82 267 aa12.11□□□□□ -0.47
TLR4-203ENST00000472304 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.49
TLR4-203ENST00000472304 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
TLR4-203ENST00000472304 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
TLR4-203ENST00000472304 BCL11AQ9H165 835 aa12.02□□□□□ -0.49
TLR4-203ENST00000472304 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
TLR4-203ENST00000472304 ACIN1Q9UKV3 1341 aaKnown RBP11.94□□□□□ -0.5
TLR4-203ENST00000472304 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
TLR4-203ENST00000472304 FAM9AQ8IZU1 332 aaPredicted RBP11.94□□□□□ -0.5
TLR4-203ENST00000472304 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
TLR4-203ENST00000472304 PEG3Q9GZU2 1588 aa11.91□□□□□ -0.5
TLR4-203ENST00000472304 ATAD2BQ9ULI0 1458 aa11.91□□□□□ -0.5
TLR4-203ENST00000472304 GTF3C3Q9Y5Q9 886 aa11.91□□□□□ -0.5
TLR4-203ENST00000472304 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
TLR4-203ENST00000472304 BAZ1BQ9UIG0 1483 aaKnown RBP11.88□□□□□ -0.51
TLR4-203ENST00000472304 EIF4G1Q04637 1599 aaKnown RBP11.86□□□□□ -0.51
TLR4-203ENST00000472304 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
TLR4-203ENST00000472304 TRIM26Q12899 539 aaPredicted RBP11.79□□□□□ -0.52
TLR4-203ENST00000472304 CENPBP07199 599 aaPredicted RBP11.78□□□□□ -0.52
TLR4-203ENST00000472304 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
TLR4-203ENST00000472304 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
TLR4-203ENST00000472304 HMGXB3Q12766 1538 aa11.71□□□□□ -0.53
TLR4-203ENST00000472304 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
TLR4-203ENST00000472304 CC2D2AQ9P2K1 1620 aa11.65□□□□□ -0.54
TLR4-203ENST00000472304 SOGA1O94964 1423 aa11.64□□□□□ -0.55
TLR4-203ENST00000472304 SYNJ1O43426 1573 aa11.61□□□□□ -0.55
TLR4-203ENST00000472304 RUSC2Q8N2Y8 1516 aa11.59□□□□□ -0.55
TLR4-203ENST00000472304 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
TLR4-203ENST00000472304 ERICH6Q7L0X2 663 aa11.58□□□□□ -0.56
TLR4-203ENST00000472304 APLP2Q06481 763 aa11.56□□□□□ -0.56
TLR4-203ENST00000472304 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
TLR4-203ENST00000472304 CFTRP13569 1480 aa11.55□□□□□ -0.56
TLR4-203ENST00000472304 EEA1Q15075 1411 aa11.52□□□□□ -0.57
TLR4-203ENST00000472304 UBTFP17480 764 aaKnown RBP11.51□□□□□ -0.57
TLR4-203ENST00000472304 TOP2BQ02880 1626 aa11.51□□□□□ -0.57
TLR4-203ENST00000472304 CADPSQ9ULU8 1353 aa11.5□□□□□ -0.57
TLR4-203ENST00000472304 CUX1P39880 1505 aa11.47□□□□□ -0.57
TLR4-203ENST00000472304 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
TLR4-203ENST00000472304 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
TLR4-203ENST00000472304 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
TLR4-203ENST00000472304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
TLR4-203ENST00000472304 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
TLR4-203ENST00000472304 TNIKQ9UKE5 1360 aa11.43□□□□□ -0.58
TLR4-203ENST00000472304 CEP162Q5TB80 1403 aa11.42□□□□□ -0.58
TLR4-203ENST00000472304 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
TLR4-203ENST00000472304 NESP48681 1621 aa11.41□□□□□ -0.58
TLR4-203ENST00000472304 CEP164Q9UPV0 1460 aa11.41□□□□□ -0.58
TLR4-203ENST00000472304 FANCD2Q9BXW9 1451 aa11.39□□□□□ -0.59
TLR4-203ENST00000472304 RANGAP1P46060 587 aaPredicted RBP11.38□□□□□ -0.59
TLR4-203ENST00000472304 KIF21BO75037 1637 aa11.38□□□□□ -0.59
TLR4-203ENST00000472304 RAPGEF2Q9Y4G8 1499 aa11.37□□□□□ -0.59
TLR4-203ENST00000472304 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
TLR4-203ENST00000472304 YTHDC1Q96MU7 727 aaKnown RBP11.37□□□□□ -0.59
TLR4-203ENST00000472304 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
TLR4-203ENST00000472304 FGD5Q6ZNL6 1462 aa11.33□□□□□ -0.6
TLR4-203ENST00000472304 CUX2O14529 1486 aa11.32□□□□□ -0.6
TLR4-203ENST00000472304 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
TLR4-203ENST00000472304 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
TLR4-203ENST00000472304 CLIP1P30622 1438 aa11.29□□□□□ -0.6
TLR4-203ENST00000472304 PRXQ9BXM0 1461 aa11.29□□□□□ -0.6
TLR4-203ENST00000472304 TOPBP1Q92547 1522 aa11.27□□□□□ -0.6
TLR4-203ENST00000472304 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.6
TLR4-203ENST00000472304 RAD54L2Q9Y4B4 1467 aa11.26□□□□□ -0.61
TLR4-203ENST00000472304 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
TLR4-203ENST00000472304 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
TLR4-203ENST00000472304 IGF1RP08069 1367 aa11.25□□□□□ -0.61
TLR4-203ENST00000472304 POLA1P09884 1462 aaPredicted RBP11.24□□□□□ -0.61
TLR4-203ENST00000472304 ANO8Q9HCE9 1232 aaPredicted RBP11.24□□□□□ -0.61
TLR4-203ENST00000472304 URB2Q14146 1524 aaKnown RBP11.23□□□□□ -0.61
TLR4-203ENST00000472304 KIF21AQ7Z4S6 1674 aa11.22□□□□□ -0.61
TLR4-203ENST00000472304 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms