RNA–Protein interactions for RNA: ENST00000470880.6

CHL1-211, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-211ENST00000470880 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
CHL1-211ENST00000470880 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
CHL1-211ENST00000470880 DNAJC5Q9H3Z4 198 aa15.69■□□□□ 0.1
CHL1-211ENST00000470880 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
CHL1-211ENST00000470880 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
CHL1-211ENST00000470880 SENP3Q9H4L4 574 aaPredicted RBP14.5□□□□□ -0.09
CHL1-211ENST00000470880 ABCC9O60706 1549 aa14.49□□□□□ -0.09
CHL1-211ENST00000470880 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
CHL1-211ENST00000470880 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
CHL1-211ENST00000470880 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
CHL1-211ENST00000470880 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
CHL1-211ENST00000470880 PLPPR3Q6T4P5 718 aa13.44□□□□□ -0.26
CHL1-211ENST00000470880 FOXD1Q16676 465 aa13.4□□□□□ -0.26
CHL1-211ENST00000470880 CUX2O14529 1486 aa13.27□□□□□ -0.29
CHL1-211ENST00000470880 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
CHL1-211ENST00000470880 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHL1-211ENST00000470880 SOCS7O14512 581 aa13.02□□□□□ -0.33
CHL1-211ENST00000470880 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
CHL1-211ENST00000470880 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
CHL1-211ENST00000470880 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
CHL1-211ENST00000470880 ADRA2BP18089 450 aa12.83□□□□□ -0.36
CHL1-211ENST00000470880 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
CHL1-211ENST00000470880 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
CHL1-211ENST00000470880 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
CHL1-211ENST00000470880 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
CHL1-211ENST00000470880 RB1CC1Q8TDY2 1594 aa12.78□□□□□ -0.36
CHL1-211ENST00000470880 NACADO15069 1562 aa12.7□□□□□ -0.38
CHL1-211ENST00000470880 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
CHL1-211ENST00000470880 DCAF1Q9Y4B6 1507 aa12.64□□□□□ -0.39
CHL1-211ENST00000470880 MYO15BQ96JP2 1530 aa12.63□□□□□ -0.39
CHL1-211ENST00000470880 ERCC6Q03468 1493 aa12.62□□□□□ -0.39
CHL1-211ENST00000470880 UNC13AQ9UPW8 1703 aa12.6□□□□□ -0.39
CHL1-211ENST00000470880 FBXO41Q8TF61 875 aa12.59□□□□□ -0.39
CHL1-211ENST00000470880 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
CHL1-211ENST00000470880 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
CHL1-211ENST00000470880 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
CHL1-211ENST00000470880 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
CHL1-211ENST00000470880 MSH5O43196 834 aa12.46□□□□□ -0.41
CHL1-211ENST00000470880 DISP3Q9P2K9 1392 aa12.45□□□□□ -0.42
CHL1-211ENST00000470880 SCRIBQ14160 1630 aa12.41□□□□□ -0.42
CHL1-211ENST00000470880 EIF4G1Q04637 1599 aaKnown RBP12.39□□□□□ -0.43
CHL1-211ENST00000470880 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
CHL1-211ENST00000470880 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
CHL1-211ENST00000470880 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.44
CHL1-211ENST00000470880 BAZ1AQ9NRL2 1556 aaPredicted RBP12.25□□□□□ -0.45
CHL1-211ENST00000470880 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
CHL1-211ENST00000470880 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
CHL1-211ENST00000470880 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
CHL1-211ENST00000470880 THOC2Q8NI27 1593 aaKnown RBP12.14□□□□□ -0.47
CHL1-211ENST00000470880 HECW2Q9P2P5 1572 aa12.09□□□□□ -0.47
CHL1-211ENST00000470880 SPATA31D1Q6ZQQ2 1576 aa12.07□□□□□ -0.48
CHL1-211ENST00000470880 KCNA4P22459 653 aa12□□□□□ -0.49
CHL1-211ENST00000470880 ARAP1Q96P48 1450 aa11.93□□□□□ -0.5
CHL1-211ENST00000470880 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
CHL1-211ENST00000470880 SYNJ2O15056 1496 aa11.89□□□□□ -0.51
CHL1-211ENST00000470880 NESP48681 1621 aa11.86□□□□□ -0.51
CHL1-211ENST00000470880 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
CHL1-211ENST00000470880 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
CHL1-211ENST00000470880 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
CHL1-211ENST00000470880 PPP4R3CPQ6ZMV5 832 aa11.81□□□□□ -0.52
CHL1-211ENST00000470880 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
CHL1-211ENST00000470880 ATAD2BQ9ULI0 1458 aa11.74□□□□□ -0.53
CHL1-211ENST00000470880 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
CHL1-211ENST00000470880 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
CHL1-211ENST00000470880 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
CHL1-211ENST00000470880 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
CHL1-211ENST00000470880 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
CHL1-211ENST00000470880 WIZO95785 1651 aa11.66□□□□□ -0.54
CHL1-211ENST00000470880 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.54
CHL1-211ENST00000470880 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
CHL1-211ENST00000470880 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
CHL1-211ENST00000470880 IFFO2Q5TF58 517 aa11.59□□□□□ -0.55
CHL1-211ENST00000470880 TOP2AP11388 1531 aaKnown RBP11.59□□□□□ -0.55
CHL1-211ENST00000470880 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
CHL1-211ENST00000470880 ADGRL1O94910 1474 aa11.56□□□□□ -0.56
CHL1-211ENST00000470880 DMRT2Q9Y5R5 561 aa11.52□□□□□ -0.57
CHL1-211ENST00000470880 CNKSR2Q8WXI2 1034 aa11.51□□□□□ -0.57
CHL1-211ENST00000470880 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
CHL1-211ENST00000470880 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
CHL1-211ENST00000470880 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
CHL1-211ENST00000470880 WDR62O43379 1518 aa11.44□□□□□ -0.58
CHL1-211ENST00000470880 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
CHL1-211ENST00000470880 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
CHL1-211ENST00000470880 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
CHL1-211ENST00000470880 MRC2Q9UBG0 1479 aa11.4□□□□□ -0.58
CHL1-211ENST00000470880 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.58
CHL1-211ENST00000470880 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
CHL1-211ENST00000470880 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
CHL1-211ENST00000470880 KDM6BO15054 1643 aa11.34□□□□□ -0.59
CHL1-211ENST00000470880 CFTRP13569 1480 aa11.33□□□□□ -0.6
CHL1-211ENST00000470880 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
CHL1-211ENST00000470880 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
CHL1-211ENST00000470880 FANCD2Q9BXW9 1451 aa11.28□□□□□ -0.6
CHL1-211ENST00000470880 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
CHL1-211ENST00000470880 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
CHL1-211ENST00000470880 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
CHL1-211ENST00000470880 CHD1O14646 1710 aa11.22□□□□□ -0.61
CHL1-211ENST00000470880 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
CHL1-211ENST00000470880 ABCC8Q09428 1581 aa11.14□□□□□ -0.63
CHL1-211ENST00000470880 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms