RNA–Protein interactions for RNA: ENST00000470189.2

C1D-205, Transcript of C1D nuclear receptor corepressor, humanhuman

TSL 3

Gene C1D, Length 665 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1D-205ENST00000470189 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
C1D-205ENST00000470189 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
C1D-205ENST00000470189 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
C1D-205ENST00000470189 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
C1D-205ENST00000470189 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
C1D-205ENST00000470189 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
C1D-205ENST00000470189 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
C1D-205ENST00000470189 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
C1D-205ENST00000470189 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
C1D-205ENST00000470189 MYO15BQ96JP2 1530 aa15.69■□□□□ 0.1
C1D-205ENST00000470189 FOXD1Q16676 465 aa15.52■□□□□ 0.08
C1D-205ENST00000470189 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
C1D-205ENST00000470189 NACADO15069 1562 aa15.47■□□□□ 0.07
C1D-205ENST00000470189 ABCC9O60706 1549 aa15.44■□□□□ 0.06
C1D-205ENST00000470189 ADRA2BP18089 450 aa15.34■□□□□ 0.05
C1D-205ENST00000470189 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
C1D-205ENST00000470189 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
C1D-205ENST00000470189 RB1CC1Q8TDY2 1594 aa15.27■□□□□ 0.03
C1D-205ENST00000470189 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
C1D-205ENST00000470189 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
C1D-205ENST00000470189 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
C1D-205ENST00000470189 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
C1D-205ENST00000470189 PIAS4Q8N2W9 510 aaPredicted RBP14.75□□□□□ -0.05
C1D-205ENST00000470189 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
C1D-205ENST00000470189 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
C1D-205ENST00000470189 BAZ1AQ9NRL2 1556 aaPredicted RBP14.71□□□□□ -0.05
C1D-205ENST00000470189 KCNA4P22459 653 aa14.7□□□□□ -0.06
C1D-205ENST00000470189 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
C1D-205ENST00000470189 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
C1D-205ENST00000470189 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
C1D-205ENST00000470189 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
C1D-205ENST00000470189 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
C1D-205ENST00000470189 WIZO95785 1651 aa14.48□□□□□ -0.09
C1D-205ENST00000470189 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
C1D-205ENST00000470189 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
C1D-205ENST00000470189 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
C1D-205ENST00000470189 ATAD2BQ9ULI0 1458 aa14.35□□□□□ -0.11
C1D-205ENST00000470189 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
C1D-205ENST00000470189 NCAPD3P42695 1498 aa14.28□□□□□ -0.12
C1D-205ENST00000470189 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.13
C1D-205ENST00000470189 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
C1D-205ENST00000470189 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
C1D-205ENST00000470189 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
C1D-205ENST00000470189 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
C1D-205ENST00000470189 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
C1D-205ENST00000470189 MSH5O43196 834 aa14.06□□□□□ -0.16
C1D-205ENST00000470189 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
C1D-205ENST00000470189 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
C1D-205ENST00000470189 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
C1D-205ENST00000470189 CFTRP13569 1480 aa13.94□□□□□ -0.18
C1D-205ENST00000470189 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
C1D-205ENST00000470189 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
C1D-205ENST00000470189 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
C1D-205ENST00000470189 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
C1D-205ENST00000470189 EEA1Q15075 1411 aa13.87□□□□□ -0.19
C1D-205ENST00000470189 ABCC8Q09428 1581 aa13.87□□□□□ -0.19
C1D-205ENST00000470189 PRDM2Q13029 1718 aa13.87□□□□□ -0.19
C1D-205ENST00000470189 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
C1D-205ENST00000470189 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
C1D-205ENST00000470189 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
C1D-205ENST00000470189 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
C1D-205ENST00000470189 SYNJ1O43426 1573 aa13.77□□□□□ -0.21
C1D-205ENST00000470189 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
C1D-205ENST00000470189 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
C1D-205ENST00000470189 CUX1P39880 1505 aa13.68□□□□□ -0.22
C1D-205ENST00000470189 SOGA1O94964 1423 aa13.67□□□□□ -0.22
C1D-205ENST00000470189 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
C1D-205ENST00000470189 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
C1D-205ENST00000470189 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
C1D-205ENST00000470189 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
C1D-205ENST00000470189 KIF21BO75037 1637 aa13.6□□□□□ -0.23
C1D-205ENST00000470189 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
C1D-205ENST00000470189 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
C1D-205ENST00000470189 KIF27Q86VH2 1401 aa13.58□□□□□ -0.24
C1D-205ENST00000470189 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
C1D-205ENST00000470189 GOLGA3Q08378 1498 aa13.57□□□□□ -0.24
C1D-205ENST00000470189 NESP48681 1621 aa13.57□□□□□ -0.24
C1D-205ENST00000470189 ZBTB22O15209 634 aa13.56□□□□□ -0.24
C1D-205ENST00000470189 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
C1D-205ENST00000470189 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
C1D-205ENST00000470189 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
C1D-205ENST00000470189 FGD5Q6ZNL6 1462 aa13.52□□□□□ -0.25
C1D-205ENST00000470189 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
C1D-205ENST00000470189 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
C1D-205ENST00000470189 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
C1D-205ENST00000470189 URB2Q14146 1524 aaKnown RBP13.47□□□□□ -0.25
C1D-205ENST00000470189 POLA1P09884 1462 aaPredicted RBP13.47□□□□□ -0.25
C1D-205ENST00000470189 CUX2O14529 1486 aa13.45□□□□□ -0.26
C1D-205ENST00000470189 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
C1D-205ENST00000470189 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
C1D-205ENST00000470189 IGF1RP08069 1367 aa13.44□□□□□ -0.26
C1D-205ENST00000470189 UBTFP17480 764 aaKnown RBP13.43□□□□□ -0.26
C1D-205ENST00000470189 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
C1D-205ENST00000470189 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
C1D-205ENST00000470189 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
C1D-205ENST00000470189 WDR97A6NE52 1622 aa13.38□□□□□ -0.27
C1D-205ENST00000470189 CARMIL1Q5VZK9 1371 aa13.36□□□□□ -0.27
C1D-205ENST00000470189 WDR62O43379 1518 aa13.36□□□□□ -0.27
C1D-205ENST00000470189 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
C1D-205ENST00000470189 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms