RNA–Protein interactions for RNA: ENST00000469979.6

PHF20L1-212, Transcript of PHD finger protein 20 like 1, humanhuman

TSL 2

Gene PHF20L1, Length 7,822 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20L1-212ENST00000469979 NISCHQ9Y2I1 1504 aa7.35□□□□□ -1.23
PHF20L1-212ENST00000469979 ABCC9O60706 1549 aa6.66□□□□□ -1.34
PHF20L1-212ENST00000469979 DCAF8L2P0C7V8 631 aa6.51□□□□□ -1.37
PHF20L1-212ENST00000469979 CCDC180Q9P1Z9 1646 aa6.32□□□□□ -1.4
PHF20L1-212ENST00000469979 PABPN1Q86U42 306 aaKnown RBP eCLIP6.31□□□□□ -1.4
PHF20L1-212ENST00000469979 DNAJC5BQ9UF47 199 aa6.23□□□□□ -1.41
PHF20L1-212ENST00000469979 RB1CC1Q8TDY2 1594 aa6.22□□□□□ -1.41
PHF20L1-212ENST00000469979 NACADO15069 1562 aa6.16□□□□□ -1.42
PHF20L1-212ENST00000469979 MYO15BQ96JP2 1530 aa6.1□□□□□ -1.43
PHF20L1-212ENST00000469979 ZCCHC6Q5VYS8 1495 aaKnown RBP6.1□□□□□ -1.43
PHF20L1-212ENST00000469979 DCAF1Q9Y4B6 1507 aa6.03□□□□□ -1.44
PHF20L1-212ENST00000469979 SCRIBQ14160 1630 aa6.01□□□□□ -1.45
PHF20L1-212ENST00000469979 SHROOM4Q9ULL8 1493 aa6.01□□□□□ -1.45
PHF20L1-212ENST00000469979 CECR2Q9BXF3 1484 aa6□□□□□ -1.45
PHF20L1-212ENST00000469979 BICRAQ9NZM4 1560 aa5.92□□□□□ -1.46
PHF20L1-212ENST00000469979 EIF4G1Q04637 1599 aaKnown RBP5.85□□□□□ -1.47
PHF20L1-212ENST00000469979 NCAPD3P42695 1498 aa5.82□□□□□ -1.48
PHF20L1-212ENST00000469979 CC2D2AQ9P2K1 1620 aa5.81□□□□□ -1.48
PHF20L1-212ENST00000469979 ATAD2BQ9ULI0 1458 aa5.79□□□□□ -1.48
PHF20L1-212ENST00000469979 ERCC6Q03468 1493 aa5.78□□□□□ -1.48
PHF20L1-212ENST00000469979 DNAJC5Q9H3Z4 198 aa5.75□□□□□ -1.49
PHF20L1-212ENST00000469979 BAZ1BQ9UIG0 1483 aaKnown RBP5.75□□□□□ -1.49
PHF20L1-212ENST00000469979 PDS5BQ9NTI5 1447 aa5.7□□□□□ -1.5
PHF20L1-212ENST00000469979 CADPSQ9ULU8 1353 aa5.7□□□□□ -1.5
PHF20L1-212ENST00000469979 SMARCA2P51531 1590 aa5.7□□□□□ -1.5
PHF20L1-212ENST00000469979 BAZ1AQ9NRL2 1556 aaPredicted RBP5.7□□□□□ -1.5
PHF20L1-212ENST00000469979 CUX2O14529 1486 aa5.68□□□□□ -1.5
PHF20L1-212ENST00000469979 HMGXB3Q12766 1538 aa5.66□□□□□ -1.5
PHF20L1-212ENST00000469979 MROH2BQ7Z745 1585 aa5.66□□□□□ -1.5
PHF20L1-212ENST00000469979 NESP48681 1621 aa5.66□□□□□ -1.5
PHF20L1-212ENST00000469979 RSF1Q96T23 1441 aaPredicted RBP5.65□□□□□ -1.5
PHF20L1-212ENST00000469979 TRIM41Q8WV44 630 aa5.61□□□□□ -1.51
PHF20L1-212ENST00000469979 SUPT5HO00267 1087 aaKnown RBP5.61□□□□□ -1.51
PHF20L1-212ENST00000469979 SMARCA4P51532 1647 aa5.61□□□□□ -1.51
PHF20L1-212ENST00000469979 MRC2Q9UBG0 1479 aa5.59□□□□□ -1.51
PHF20L1-212ENST00000469979 OSCARQ8IYS5 282 aa5.58□□□□□ -1.52
PHF20L1-212ENST00000469979 FANCD2Q9BXW9 1451 aa5.57□□□□□ -1.52
PHF20L1-212ENST00000469979 CEP164Q9UPV0 1460 aa5.56□□□□□ -1.52
PHF20L1-212ENST00000469979 FBLN2P98095 1184 aa5.55□□□□□ -1.52
PHF20L1-212ENST00000469979 CFTRP13569 1480 aa5.55□□□□□ -1.52
PHF20L1-212ENST00000469979 PEG3Q9GZU2 1588 aa5.54□□□□□ -1.52
PHF20L1-212ENST00000469979 LAMC3Q9Y6N6 1575 aa5.52□□□□□ -1.53
PHF20L1-212ENST00000469979 TOP2AP11388 1531 aaKnown RBP5.51□□□□□ -1.53
PHF20L1-212ENST00000469979 CCDC88BA6NC98 1476 aa5.51□□□□□ -1.53
PHF20L1-212ENST00000469979 UNC13AQ9UPW8 1703 aa5.51□□□□□ -1.53
PHF20L1-212ENST00000469979 IFT140Q96RY7 1462 aa5.5□□□□□ -1.53
PHF20L1-212ENST00000469979 CHMP7Q8WUX9 453 aaPredicted RBP5.48□□□□□ -1.53
PHF20L1-212ENST00000469979 TDRD9Q8NDG6 1382 aaKnown RBP5.48□□□□□ -1.53
PHF20L1-212ENST00000469979 URB2Q14146 1524 aaKnown RBP5.46□□□□□ -1.54
PHF20L1-212ENST00000469979 WDR62O43379 1518 aa5.45□□□□□ -1.54
PHF20L1-212ENST00000469979 AQRO60306 1485 aaKnown RBP eCLIP5.45□□□□□ -1.54
PHF20L1-212ENST00000469979 SOGA1O94964 1423 aa5.45□□□□□ -1.54
PHF20L1-212ENST00000469979 ABCC8Q09428 1581 aa5.44□□□□□ -1.54
PHF20L1-212ENST00000469979 CYB5RLQ6IPT4 315 aa5.44□□□□□ -1.54
PHF20L1-212ENST00000469979 TRHP20396 242 aaPredicted RBP5.44□□□□□ -1.54
PHF20L1-212ENST00000469979 THOC2Q8NI27 1593 aaKnown RBP5.42□□□□□ -1.54
PHF20L1-212ENST00000469979 ZNF608Q9ULD9 1512 aaPredicted RBP5.42□□□□□ -1.54
PHF20L1-212ENST00000469979 TOPBP1Q92547 1522 aa5.42□□□□□ -1.54
PHF20L1-212ENST00000469979 WIZO95785 1651 aa5.41□□□□□ -1.54
PHF20L1-212ENST00000469979 RAD54L2Q9Y4B4 1467 aa5.41□□□□□ -1.54
PHF20L1-212ENST00000469979 POLA1P09884 1462 aaPredicted RBP5.38□□□□□ -1.55
PHF20L1-212ENST00000469979 WRNQ14191 1432 aaPredicted RBP eCLIP5.38□□□□□ -1.55
PHF20L1-212ENST00000469979 FGD5Q6ZNL6 1462 aa5.37□□□□□ -1.55
PHF20L1-212ENST00000469979 GRIN2BQ13224 1484 aa5.36□□□□□ -1.55
PHF20L1-212ENST00000469979 NPM1P06748 294 aaKnown RBP eCLIP5.36□□□□□ -1.55
PHF20L1-212ENST00000469979 SNAPC4Q5SXM2 1469 aa5.35□□□□□ -1.55
PHF20L1-212ENST00000469979 DNMBPQ6XZF7 1577 aa5.34□□□□□ -1.55
PHF20L1-212ENST00000469979 TTBK1Q5TCY1 1321 aaPredicted RBP5.33□□□□□ -1.56
PHF20L1-212ENST00000469979 GAPVD1Q14C86 1478 aa5.32□□□□□ -1.56
PHF20L1-212ENST00000469979 SYNJ2O15056 1496 aa5.31□□□□□ -1.56
PHF20L1-212ENST00000469979 FHAD1B1AJZ9 1412 aa5.31□□□□□ -1.56
PHF20L1-212ENST00000469979 ARHGEF11O15085 1522 aa5.31□□□□□ -1.56
PHF20L1-212ENST00000469979 MAGI1Q96QZ7 1491 aaPredicted RBP5.3□□□□□ -1.56
PHF20L1-212ENST00000469979 FAM9AQ8IZU1 332 aaPredicted RBP5.3□□□□□ -1.56
PHF20L1-212ENST00000469979 ABCA10Q8WWZ4 1543 aa5.3□□□□□ -1.56
PHF20L1-212ENST00000469979 CUX1P39880 1505 aa5.3□□□□□ -1.56
PHF20L1-212ENST00000469979 JPH4Q96JJ6 628 aa5.3□□□□□ -1.56
PHF20L1-212ENST00000469979 AEBP2Q6ZN18 517 aaPredicted RBP5.29□□□□□ -1.56
PHF20L1-212ENST00000469979 KIF27Q86VH2 1401 aa5.28□□□□□ -1.56
PHF20L1-212ENST00000469979 PRG4Q92954 1404 aaPredicted RBP5.28□□□□□ -1.56
PHF20L1-212ENST00000469979 ARAP1Q96P48 1450 aa5.27□□□□□ -1.57
PHF20L1-212ENST00000469979 IGF1RP08069 1367 aa5.27□□□□□ -1.57
PHF20L1-212ENST00000469979 CARMIL1Q5VZK9 1371 aa5.26□□□□□ -1.57
PHF20L1-212ENST00000469979 GRIN2AQ12879 1464 aa5.26□□□□□ -1.57
PHF20L1-212ENST00000469979 NUP160Q12769 1436 aa5.25□□□□□ -1.57
PHF20L1-212ENST00000469979 KIF21AQ7Z4S6 1674 aa5.25□□□□□ -1.57
PHF20L1-212ENST00000469979 FAM69CQ0P6D2 419 aa5.25□□□□□ -1.57
PHF20L1-212ENST00000469979 PTPRGP23470 1445 aa5.24□□□□□ -1.57
PHF20L1-212ENST00000469979 SYNJ1O43426 1573 aa5.24□□□□□ -1.57
PHF20L1-212ENST00000469979 EIF4G3O43432 1585 aaKnown RBP5.24□□□□□ -1.57
PHF20L1-212ENST00000469979 CARMIL2Q6F5E8 1435 aa5.23□□□□□ -1.57
PHF20L1-212ENST00000469979 TNIKQ9UKE5 1360 aa5.23□□□□□ -1.57
PHF20L1-212ENST00000469979 KIAA0586Q9BVV6 1533 aa5.21□□□□□ -1.58
PHF20L1-212ENST00000469979 RANGAP1P46060 587 aaPredicted RBP5.21□□□□□ -1.58
PHF20L1-212ENST00000469979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.21□□□□□ -1.58
PHF20L1-212ENST00000469979 HNRNPUL2Q1KMD3 747 aaKnown RBP5.21□□□□□ -1.58
PHF20L1-212ENST00000469979 CSRNP3Q8WYN3 585 aa5.2□□□□□ -1.58
PHF20L1-212ENST00000469979 TARBP1Q13395 1621 aaKnown RBP5.2□□□□□ -1.58
PHF20L1-212ENST00000469979 ARID3CA6NKF2 412 aa5.19□□□□□ -1.58
PHF20L1-212ENST00000469979 CLASP1Q7Z460 1538 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms