RNA–Protein interactions for RNA: ENST00000469023.5

ATP1A4-204, Transcript of ATPase Na+/K+ transporting subunit alpha 4, humanhuman

TSL 2

Gene ATP1A4, Length 3,916 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A4-204ENST00000469023 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
ATP1A4-204ENST00000469023 ABCC9O60706 1549 aa14.28□□□□□ -0.12
ATP1A4-204ENST00000469023 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
ATP1A4-204ENST00000469023 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.21
ATP1A4-204ENST00000469023 DCAF8L2P0C7V8 631 aa13.6□□□□□ -0.23
ATP1A4-204ENST00000469023 RB1CC1Q8TDY2 1594 aa13.39□□□□□ -0.27
ATP1A4-204ENST00000469023 SHROOM4Q9ULL8 1493 aa13.28□□□□□ -0.28
ATP1A4-204ENST00000469023 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATP1A4-204ENST00000469023 DNAJC5Q9H3Z4 198 aa13.2□□□□□ -0.3
ATP1A4-204ENST00000469023 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
ATP1A4-204ENST00000469023 NACADO15069 1562 aa13.14□□□□□ -0.31
ATP1A4-204ENST00000469023 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.32
ATP1A4-204ENST00000469023 HRCP23327 699 aa13.03□□□□□ -0.32
ATP1A4-204ENST00000469023 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
ATP1A4-204ENST00000469023 CECR2Q9BXF3 1484 aa12.95□□□□□ -0.34
ATP1A4-204ENST00000469023 CHIC1Q5VXU3 224 aa12.89□□□□□ -0.35
ATP1A4-204ENST00000469023 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
ATP1A4-204ENST00000469023 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
ATP1A4-204ENST00000469023 BICRAQ9NZM4 1560 aa12.84□□□□□ -0.35
ATP1A4-204ENST00000469023 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
ATP1A4-204ENST00000469023 ZCCHC6Q5VYS8 1495 aaKnown RBP12.79□□□□□ -0.36
ATP1A4-204ENST00000469023 LOC105371045A0A1W2PR82 267 aa12.68□□□□□ -0.38
ATP1A4-204ENST00000469023 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
ATP1A4-204ENST00000469023 CUX2O14529 1486 aa12.59□□□□□ -0.39
ATP1A4-204ENST00000469023 DCAF1Q9Y4B6 1507 aa12.53□□□□□ -0.4
ATP1A4-204ENST00000469023 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
ATP1A4-204ENST00000469023 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
ATP1A4-204ENST00000469023 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
ATP1A4-204ENST00000469023 SCAF1Q9H7N4 1312 aaKnown RBP12.4□□□□□ -0.42
ATP1A4-204ENST00000469023 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
ATP1A4-204ENST00000469023 EHMT2Q96KQ7 1210 aa12.14□□□□□ -0.47
ATP1A4-204ENST00000469023 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
ATP1A4-204ENST00000469023 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
ATP1A4-204ENST00000469023 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
ATP1A4-204ENST00000469023 NEUROD1Q13562 356 aa12.07□□□□□ -0.48
ATP1A4-204ENST00000469023 NESP48681 1621 aa12.03□□□□□ -0.48
ATP1A4-204ENST00000469023 AEBP2Q6ZN18 517 aaPredicted RBP12.03□□□□□ -0.48
ATP1A4-204ENST00000469023 THOC2Q8NI27 1593 aaKnown RBP12.01□□□□□ -0.49
ATP1A4-204ENST00000469023 SMARCA2P51531 1590 aa12□□□□□ -0.49
ATP1A4-204ENST00000469023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
ATP1A4-204ENST00000469023 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
ATP1A4-204ENST00000469023 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
ATP1A4-204ENST00000469023 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
ATP1A4-204ENST00000469023 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
ATP1A4-204ENST00000469023 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
ATP1A4-204ENST00000469023 HMGXB3Q12766 1538 aa11.97□□□□□ -0.49
ATP1A4-204ENST00000469023 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
ATP1A4-204ENST00000469023 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
ATP1A4-204ENST00000469023 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
ATP1A4-204ENST00000469023 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
ATP1A4-204ENST00000469023 GTF3C3Q9Y5Q9 886 aa11.89□□□□□ -0.51
ATP1A4-204ENST00000469023 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
ATP1A4-204ENST00000469023 MRC2Q9UBG0 1479 aa11.85□□□□□ -0.51
ATP1A4-204ENST00000469023 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
ATP1A4-204ENST00000469023 WIZO95785 1651 aa11.84□□□□□ -0.51
ATP1A4-204ENST00000469023 KIF21AQ7Z4S6 1674 aa11.84□□□□□ -0.51
ATP1A4-204ENST00000469023 SMARCA4P51532 1647 aa11.8□□□□□ -0.52
ATP1A4-204ENST00000469023 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
ATP1A4-204ENST00000469023 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
ATP1A4-204ENST00000469023 WDR62O43379 1518 aa11.77□□□□□ -0.53
ATP1A4-204ENST00000469023 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
ATP1A4-204ENST00000469023 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
ATP1A4-204ENST00000469023 RIMBP3CA6NJZ7 1639 aa11.74□□□□□ -0.53
ATP1A4-204ENST00000469023 RIMBP3BA6NNM3 1639 aa11.74□□□□□ -0.53
ATP1A4-204ENST00000469023 RIMBP3Q9UFD9 1639 aa11.74□□□□□ -0.53
ATP1A4-204ENST00000469023 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
ATP1A4-204ENST00000469023 CYB5RLQ6IPT4 315 aa11.72□□□□□ -0.53
ATP1A4-204ENST00000469023 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
ATP1A4-204ENST00000469023 CCDC88BA6NC98 1476 aa11.7□□□□□ -0.54
ATP1A4-204ENST00000469023 ARHGEF11O15085 1522 aa11.68□□□□□ -0.54
ATP1A4-204ENST00000469023 RUSC2Q8N2Y8 1516 aa11.68□□□□□ -0.54
ATP1A4-204ENST00000469023 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
ATP1A4-204ENST00000469023 SOGA1O94964 1423 aa11.64□□□□□ -0.55
ATP1A4-204ENST00000469023 MIER1Q8N108 512 aa11.64□□□□□ -0.55
ATP1A4-204ENST00000469023 YTHDC1Q96MU7 727 aaKnown RBP11.64□□□□□ -0.55
ATP1A4-204ENST00000469023 WRNQ14191 1432 aaPredicted RBP eCLIP11.63□□□□□ -0.55
ATP1A4-204ENST00000469023 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
ATP1A4-204ENST00000469023 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
ATP1A4-204ENST00000469023 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
ATP1A4-204ENST00000469023 RANGAP1P46060 587 aaPredicted RBP11.55□□□□□ -0.56
ATP1A4-204ENST00000469023 CENPBP07199 599 aaPredicted RBP11.54□□□□□ -0.56
ATP1A4-204ENST00000469023 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
ATP1A4-204ENST00000469023 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
ATP1A4-204ENST00000469023 FBLN2P98095 1184 aa11.49□□□□□ -0.57
ATP1A4-204ENST00000469023 TNIKQ9UKE5 1360 aa11.48□□□□□ -0.57
ATP1A4-204ENST00000469023 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
ATP1A4-204ENST00000469023 TOP2AP11388 1531 aaKnown RBP11.47□□□□□ -0.57
ATP1A4-204ENST00000469023 CFTRP13569 1480 aa11.45□□□□□ -0.58
ATP1A4-204ENST00000469023 HNRNPUL2Q1KMD3 747 aaKnown RBP11.45□□□□□ -0.58
ATP1A4-204ENST00000469023 UBTFP17480 764 aaKnown RBP11.42□□□□□ -0.58
ATP1A4-204ENST00000469023 ZNF608Q9ULD9 1512 aaPredicted RBP11.41□□□□□ -0.58
ATP1A4-204ENST00000469023 ILDR1Q86SU0 546 aaPredicted RBP11.4□□□□□ -0.58
ATP1A4-204ENST00000469023 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
ATP1A4-204ENST00000469023 KCNH8Q96L42 1107 aa11.37□□□□□ -0.59
ATP1A4-204ENST00000469023 SUPT16HQ9Y5B9 1047 aaKnown RBP11.37□□□□□ -0.59
ATP1A4-204ENST00000469023 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
ATP1A4-204ENST00000469023 CHD1O14646 1710 aa11.35□□□□□ -0.59
ATP1A4-204ENST00000469023 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
ATP1A4-204ENST00000469023 CLIP1P30622 1438 aa11.34□□□□□ -0.59
ATP1A4-204ENST00000469023 GOLGA3Q08378 1498 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms