RNA–Protein interactions for RNA: ENST00000467942.2

C3orf52-203, Transcript of chromosome 3 open reading frame 52, humanhuman

TSL 1 (best)

Gene C3orf52, Length 3,722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf52-203ENST00000467942 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
C3orf52-203ENST00000467942 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
C3orf52-203ENST00000467942 ABCC9O60706 1549 aa11.91□□□□□ -0.5
C3orf52-203ENST00000467942 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
C3orf52-203ENST00000467942 CCDC180Q9P1Z9 1646 aa11.35□□□□□ -0.59
C3orf52-203ENST00000467942 SHROOM4Q9ULL8 1493 aa11.31□□□□□ -0.6
C3orf52-203ENST00000467942 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
C3orf52-203ENST00000467942 SCRIBQ14160 1630 aa10.92□□□□□ -0.66
C3orf52-203ENST00000467942 NACADO15069 1562 aa10.91□□□□□ -0.66
C3orf52-203ENST00000467942 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
C3orf52-203ENST00000467942 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
C3orf52-203ENST00000467942 SUPT5HO00267 1087 aaKnown RBP10.83□□□□□ -0.68
C3orf52-203ENST00000467942 DCAF1Q9Y4B6 1507 aa10.56□□□□□ -0.72
C3orf52-203ENST00000467942 CECR2Q9BXF3 1484 aa10.56□□□□□ -0.72
C3orf52-203ENST00000467942 MYO15BQ96JP2 1530 aa10.54□□□□□ -0.72
C3orf52-203ENST00000467942 BICRAQ9NZM4 1560 aa10.48□□□□□ -0.73
C3orf52-203ENST00000467942 UNC13AQ9UPW8 1703 aa10.45□□□□□ -0.74
C3orf52-203ENST00000467942 EIF4G1Q04637 1599 aaKnown RBP10.41□□□□□ -0.74
C3orf52-203ENST00000467942 CC2D2AQ9P2K1 1620 aa10.4□□□□□ -0.74
C3orf52-203ENST00000467942 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
C3orf52-203ENST00000467942 BAZ1BQ9UIG0 1483 aaKnown RBP10.33□□□□□ -0.76
C3orf52-203ENST00000467942 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
C3orf52-203ENST00000467942 FBLN2P98095 1184 aa10.28□□□□□ -0.76
C3orf52-203ENST00000467942 MROH2BQ7Z745 1585 aa10.26□□□□□ -0.77
C3orf52-203ENST00000467942 BAZ1AQ9NRL2 1556 aaPredicted RBP10.25□□□□□ -0.77
C3orf52-203ENST00000467942 ATAD2BQ9ULI0 1458 aa10.24□□□□□ -0.77
C3orf52-203ENST00000467942 RSF1Q96T23 1441 aaPredicted RBP10.2□□□□□ -0.78
C3orf52-203ENST00000467942 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
C3orf52-203ENST00000467942 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
C3orf52-203ENST00000467942 NESP48681 1621 aa10.17□□□□□ -0.78
C3orf52-203ENST00000467942 SMARCA4P51532 1647 aa10.17□□□□□ -0.78
C3orf52-203ENST00000467942 FAM9AQ8IZU1 332 aaPredicted RBP10.15□□□□□ -0.78
C3orf52-203ENST00000467942 NCAPD3P42695 1498 aa10.13□□□□□ -0.79
C3orf52-203ENST00000467942 RANGAP1P46060 587 aaPredicted RBP10.13□□□□□ -0.79
C3orf52-203ENST00000467942 WIZO95785 1651 aa10.13□□□□□ -0.79
C3orf52-203ENST00000467942 PDS5BQ9NTI5 1447 aa10.08□□□□□ -0.8
C3orf52-203ENST00000467942 CADPSQ9ULU8 1353 aa10.07□□□□□ -0.8
C3orf52-203ENST00000467942 TRIM41Q8WV44 630 aa10.07□□□□□ -0.8
C3orf52-203ENST00000467942 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
C3orf52-203ENST00000467942 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
C3orf52-203ENST00000467942 FANCD2Q9BXW9 1451 aa9.96□□□□□ -0.81
C3orf52-203ENST00000467942 CEP164Q9UPV0 1460 aa9.96□□□□□ -0.82
C3orf52-203ENST00000467942 HMGXB3Q12766 1538 aa9.94□□□□□ -0.82
C3orf52-203ENST00000467942 TDRD9Q8NDG6 1382 aaKnown RBP9.91□□□□□ -0.82
C3orf52-203ENST00000467942 TOP2AP11388 1531 aaKnown RBP9.91□□□□□ -0.82
C3orf52-203ENST00000467942 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
C3orf52-203ENST00000467942 TRHP20396 242 aaPredicted RBP9.89□□□□□ -0.83
C3orf52-203ENST00000467942 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
C3orf52-203ENST00000467942 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
C3orf52-203ENST00000467942 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
C3orf52-203ENST00000467942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.83□□□□□ -0.84
C3orf52-203ENST00000467942 HNRNPUL2Q1KMD3 747 aaKnown RBP9.83□□□□□ -0.84
C3orf52-203ENST00000467942 MRC2Q9UBG0 1479 aa9.83□□□□□ -0.84
C3orf52-203ENST00000467942 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
C3orf52-203ENST00000467942 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
C3orf52-203ENST00000467942 SOGA1O94964 1423 aa9.82□□□□□ -0.84
C3orf52-203ENST00000467942 CFTRP13569 1480 aa9.82□□□□□ -0.84
C3orf52-203ENST00000467942 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.84
C3orf52-203ENST00000467942 DNAJC5Q9H3Z4 198 aa9.79□□□□□ -0.84
C3orf52-203ENST00000467942 P3H3Q8IVL6 736 aa9.78□□□□□ -0.84
C3orf52-203ENST00000467942 RAD54L2Q9Y4B4 1467 aa9.78□□□□□ -0.84
C3orf52-203ENST00000467942 PEG3Q9GZU2 1588 aa9.78□□□□□ -0.84
C3orf52-203ENST00000467942 WRNQ14191 1432 aaPredicted RBP eCLIP9.77□□□□□ -0.85
C3orf52-203ENST00000467942 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
C3orf52-203ENST00000467942 ABCC8Q09428 1581 aa9.74□□□□□ -0.85
C3orf52-203ENST00000467942 CUX2O14529 1486 aa9.73□□□□□ -0.85
C3orf52-203ENST00000467942 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
C3orf52-203ENST00000467942 URB2Q14146 1524 aaKnown RBP9.71□□□□□ -0.85
C3orf52-203ENST00000467942 ZNF608Q9ULD9 1512 aaPredicted RBP9.7□□□□□ -0.86
C3orf52-203ENST00000467942 TOPBP1Q92547 1522 aa9.7□□□□□ -0.86
C3orf52-203ENST00000467942 FGD5Q6ZNL6 1462 aa9.69□□□□□ -0.86
C3orf52-203ENST00000467942 CHIC1Q5VXU3 224 aa9.69□□□□□ -0.86
C3orf52-203ENST00000467942 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.86
C3orf52-203ENST00000467942 MYT1LQ9UL68 1186 aa9.65□□□□□ -0.87
C3orf52-203ENST00000467942 IFT140Q96RY7 1462 aa9.64□□□□□ -0.87
C3orf52-203ENST00000467942 CSRNP3Q8WYN3 585 aa9.62□□□□□ -0.87
C3orf52-203ENST00000467942 GAPVD1Q14C86 1478 aa9.61□□□□□ -0.87
C3orf52-203ENST00000467942 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
C3orf52-203ENST00000467942 KIF27Q86VH2 1401 aa9.6□□□□□ -0.87
C3orf52-203ENST00000467942 JPH4Q96JJ6 628 aa9.6□□□□□ -0.87
C3orf52-203ENST00000467942 CUX1P39880 1505 aa9.58□□□□□ -0.88
C3orf52-203ENST00000467942 DNMBPQ6XZF7 1577 aa9.58□□□□□ -0.88
C3orf52-203ENST00000467942 SNAPC4Q5SXM2 1469 aa9.57□□□□□ -0.88
C3orf52-203ENST00000467942 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
C3orf52-203ENST00000467942 PLPPR3Q6T4P5 718 aa9.57□□□□□ -0.88
C3orf52-203ENST00000467942 CARMIL1Q5VZK9 1371 aa9.56□□□□□ -0.88
C3orf52-203ENST00000467942 THOC2Q8NI27 1593 aaKnown RBP9.56□□□□□ -0.88
C3orf52-203ENST00000467942 WDR62O43379 1518 aa9.56□□□□□ -0.88
C3orf52-203ENST00000467942 APLP2Q06481 763 aa9.55□□□□□ -0.88
C3orf52-203ENST00000467942 GRIN2BQ13224 1484 aa9.54□□□□□ -0.88
C3orf52-203ENST00000467942 SYNJ1O43426 1573 aa9.49□□□□□ -0.89
C3orf52-203ENST00000467942 PPARGC1BQ86YN6 1023 aaKnown RBP9.49□□□□□ -0.89
C3orf52-203ENST00000467942 RUSC2Q8N2Y8 1516 aa9.48□□□□□ -0.89
C3orf52-203ENST00000467942 FAM69CQ0P6D2 419 aa9.47□□□□□ -0.89
C3orf52-203ENST00000467942 IGF1RP08069 1367 aa9.46□□□□□ -0.89
C3orf52-203ENST00000467942 EIF4G3O43432 1585 aaKnown RBP9.45□□□□□ -0.9
C3orf52-203ENST00000467942 FHAD1B1AJZ9 1412 aa9.44□□□□□ -0.9
C3orf52-203ENST00000467942 PRG4Q92954 1404 aaPredicted RBP9.44□□□□□ -0.9
C3orf52-203ENST00000467942 AEBP2Q6ZN18 517 aaPredicted RBP9.44□□□□□ -0.9
C3orf52-203ENST00000467942 ZNF777Q9ULD5 760 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms