RNA–Protein interactions for RNA: ENST00000467551.1

GABPB2-204, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

TSL 1 (best)

Gene GABPB2, Length 1,017 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-204ENST00000467551 AEBP2Q6ZN18 517 aaPredicted RBP27.79■■■□□ 2.04
GABPB2-204ENST00000467551 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
GABPB2-204ENST00000467551 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
GABPB2-204ENST00000467551 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
GABPB2-204ENST00000467551 FOXD1Q16676 465 aa22.34■■□□□ 1.17
GABPB2-204ENST00000467551 POTEDQ86YR6 584 aa21.72■■□□□ 1.07
GABPB2-204ENST00000467551 MSH5O43196 834 aa21.35■■□□□ 1.01
GABPB2-204ENST00000467551 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
GABPB2-204ENST00000467551 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.93
GABPB2-204ENST00000467551 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
GABPB2-204ENST00000467551 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
GABPB2-204ENST00000467551 ADRA2BP18089 450 aa20.28■□□□□ 0.84
GABPB2-204ENST00000467551 ABCC9O60706 1549 aa19.3■□□□□ 0.68
GABPB2-204ENST00000467551 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
GABPB2-204ENST00000467551 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
GABPB2-204ENST00000467551 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
GABPB2-204ENST00000467551 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
GABPB2-204ENST00000467551 CACNB1Q02641 598 aaPredicted RBP18.66■□□□□ 0.58
GABPB2-204ENST00000467551 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
GABPB2-204ENST00000467551 NACADO15069 1562 aa18.25■□□□□ 0.51
GABPB2-204ENST00000467551 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
GABPB2-204ENST00000467551 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
GABPB2-204ENST00000467551 RNF39Q9H2S5 420 aa18.04■□□□□ 0.48
GABPB2-204ENST00000467551 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
GABPB2-204ENST00000467551 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
GABPB2-204ENST00000467551 HOXD11P31277 338 aaPredicted RBP17.96■□□□□ 0.47
GABPB2-204ENST00000467551 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
GABPB2-204ENST00000467551 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
GABPB2-204ENST00000467551 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
GABPB2-204ENST00000467551 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
GABPB2-204ENST00000467551 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
GABPB2-204ENST00000467551 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
GABPB2-204ENST00000467551 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
GABPB2-204ENST00000467551 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
GABPB2-204ENST00000467551 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
GABPB2-204ENST00000467551 ZCCHC6Q5VYS8 1495 aaKnown RBP17.59■□□□□ 0.41
GABPB2-204ENST00000467551 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
GABPB2-204ENST00000467551 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
GABPB2-204ENST00000467551 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
GABPB2-204ENST00000467551 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
GABPB2-204ENST00000467551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.35
GABPB2-204ENST00000467551 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
GABPB2-204ENST00000467551 DNAJC5Q9H3Z4 198 aa17.03■□□□□ 0.32
GABPB2-204ENST00000467551 POTEHQ6S545 545 aa16.96■□□□□ 0.31
GABPB2-204ENST00000467551 CUX2O14529 1486 aa16.88■□□□□ 0.29
GABPB2-204ENST00000467551 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
GABPB2-204ENST00000467551 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
GABPB2-204ENST00000467551 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
GABPB2-204ENST00000467551 CAPN15O75808 1086 aa16.71■□□□□ 0.27
GABPB2-204ENST00000467551 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
GABPB2-204ENST00000467551 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
GABPB2-204ENST00000467551 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
GABPB2-204ENST00000467551 DSG3P32926 999 aa16.67■□□□□ 0.26
GABPB2-204ENST00000467551 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
GABPB2-204ENST00000467551 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
GABPB2-204ENST00000467551 BAZ1AQ9NRL2 1556 aaPredicted RBP16.59■□□□□ 0.25
GABPB2-204ENST00000467551 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
GABPB2-204ENST00000467551 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
GABPB2-204ENST00000467551 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
GABPB2-204ENST00000467551 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
GABPB2-204ENST00000467551 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
GABPB2-204ENST00000467551 NESP48681 1621 aa16.47■□□□□ 0.23
GABPB2-204ENST00000467551 APLP2Q06481 763 aa16.44■□□□□ 0.22
GABPB2-204ENST00000467551 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
GABPB2-204ENST00000467551 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
GABPB2-204ENST00000467551 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
GABPB2-204ENST00000467551 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
GABPB2-204ENST00000467551 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
GABPB2-204ENST00000467551 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
GABPB2-204ENST00000467551 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
GABPB2-204ENST00000467551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
GABPB2-204ENST00000467551 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
GABPB2-204ENST00000467551 WDR62O43379 1518 aa16.2■□□□□ 0.18
GABPB2-204ENST00000467551 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
GABPB2-204ENST00000467551 ABCB7O75027 752 aa16.16■□□□□ 0.18
GABPB2-204ENST00000467551 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
GABPB2-204ENST00000467551 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
GABPB2-204ENST00000467551 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
GABPB2-204ENST00000467551 CFTRP13569 1480 aa16.08■□□□□ 0.16
GABPB2-204ENST00000467551 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
GABPB2-204ENST00000467551 WIZO95785 1651 aa16.05■□□□□ 0.16
GABPB2-204ENST00000467551 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
GABPB2-204ENST00000467551 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
GABPB2-204ENST00000467551 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
GABPB2-204ENST00000467551 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
GABPB2-204ENST00000467551 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
GABPB2-204ENST00000467551 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
GABPB2-204ENST00000467551 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
GABPB2-204ENST00000467551 ABCC8Q09428 1581 aa15.85■□□□□ 0.13
GABPB2-204ENST00000467551 PRDM2Q13029 1718 aa15.77■□□□□ 0.12
GABPB2-204ENST00000467551 KCNA4P22459 653 aa15.77■□□□□ 0.12
GABPB2-204ENST00000467551 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
GABPB2-204ENST00000467551 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
GABPB2-204ENST00000467551 RIMBP3CA6NJZ7 1639 aa15.72■□□□□ 0.11
GABPB2-204ENST00000467551 RIMBP3BA6NNM3 1639 aa15.72■□□□□ 0.11
GABPB2-204ENST00000467551 RIMBP3Q9UFD9 1639 aa15.72■□□□□ 0.11
GABPB2-204ENST00000467551 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
GABPB2-204ENST00000467551 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
GABPB2-204ENST00000467551 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
GABPB2-204ENST00000467551 POLA2Q14181 598 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms